MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-523G16
Chromosome	12 (Build37)
Map Location	21,581,244 - 21,581,712
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100043377, LOC625810, 1700030C10Rik, 3110053B16Rik, LOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407
Downstream gene	LOC100042796, 6030426L16Rik, LOC434693, EG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043377 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC625810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	1700030C10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69513 MGI:1916763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs

name	3110053B16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382686 MGI:1920435
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins

name	LOC668698 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC546752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins pseudo : _no_value

name	EG629257 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629257 MGI:3643096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ddef2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211914 MGI:2685438
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itgb1bp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16413 MGI:1306802
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpsf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54451 MGI:1859328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iah1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67732 MGI:1914982
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11491 MGI:1096335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ywhaq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22630 MGI:891963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043407 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs

name	LOC100042796 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	6030426L16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628850 MGI:1924364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	LOC434693 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 134 ESTs, 7 Proteins

name	EG668645 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668645 MGI:3649104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 13 Proteins pseudo : _no_value

name	EG668646 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668646 MGI:3649101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins pseudo : _no_value

name	LOC100043416 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 1 Protein

name	LOC668650 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	EG668496 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668496 MGI:3644608
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 1 Protein

name	LOC668653 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668653
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins pseudo : _no_value

name	EG432637 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432637 MGI:3649058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668656 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668656
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	LOC100043377 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262885 GeneID:100043377
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to development and differentiation enhancing factor 2 transcript_id : XM_001480493.1

name	LOC668698 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262803 GeneID:668698
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : similar to development and differentiation enhancing factor 2 transcript_id : XM_001478806.1

name	EG629257 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82941416 GeneID:629257 MGI:3643096
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG629257 transcript_id : XM_894112.1

name	Ddef2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138527 GeneID:211914 MGI:2685438
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : development and differentiation enhancing factor 2 transcript_id : NM_001004364.1

name	Itgb1bp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802501 GeneID:16413 MGI:1306802
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin beta 1 binding protein 1 transcript_id : NM_008403.3

name	Cpsf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980903 GeneID:54451 MGI:1859328
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cleavage and polyadenylation specificity factor 3 transcript_id : NM_018813.2

name	Iah1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067105 GeneID:67732 MGI:1914982
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) transcript_id : NM_026347.3

name	Adam17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347484 GeneID:11491 MGI:1096335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 17 transcript_id : NM_009615.5

name	Ywhaq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892422 GeneID:22630 MGI:891963
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide transcript_id : NM_011739.3

name	LOC100043407 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262889 GeneID:100043407
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs product : hypothetical protein LOC100043407 transcript_id : XM_001480548.1

name	LOC434693 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262894 GeneID:434693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 106 ESTs, 7 Proteins product : similar to muscle protein684, transcript variant 2 transcript_id : XM_001480560.1

name	LOC434693 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262892 GeneID:434693
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 134 ESTs, 7 Proteins product : similar to muscle protein684, transcript variant 1 transcript_id : XM_001480557.1

name	LOC100043416 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149262896 GeneID:100043416
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 1 Protein product : similar to development and differentiation enhancing factor 2 transcript_id : XM_001480563.1

name	EG668496 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149262898 GeneID:668496 MGI:3644608
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 1 Protein product : predicted gene, EG668496, transcript variant 1 transcript_id : XM_001004831.2

name	EG432637 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51921332 GeneID:432637 MGI:3649058
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG432637 transcript_id : NM_001004167.1

name	LOC100043377 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262886 GeneID:100043377
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480543.1

name	LOC668698 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262804 GeneID:668698
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478856.1

name	EG629257 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82941417 GeneID:629257 MGI:3643096
definition	codon_start : 1 product : similar to NADH dehydrogenase protein_id : XP_899205.1

name	Ddef2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138528 GeneID:211914 MGI:2685438
definition	GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0043087 - regulation of GTPase activity [Evidence IEA] codon_start : 1 note : PYK2 C terminus-associated protein product : development and differentiation enhancing factor 2 protein_id : NP_001004364.1

name	Itgb1bp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680488 CCDS:CCDS25833.1 GeneID:16413 MGI:1306802
definition	GO_function : GO:0005178 - integrin binding [Evidence ISS]; GO:0008022 - protein C-terminus binding [Evidence ISS] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0030155 - regulation of cell adhesion [Evidence ISS] codon_start : 1 product : integrin beta 1 binding protein 1 protein_id : NP_032429.1

name	Cpsf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980904 CCDS:CCDS25834.1 GeneID:54451 MGI:1859328
definition	GO_component : GO:0005847 - mRNA cleavage and polyadenylation specificity factor complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003729 - mRNA binding [Evidence ISS]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006378 - mRNA polyadenylation [Evidence ISS]; GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : cleavage and polyadenylation specificity factor 3 protein_id : NP_061283.2

name	Iah1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27754071 CCDS:CCDS25835.1 GeneID:67732 MGI:1914982
definition	GO_function : GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : isoamyl acetate-hydrolyzing esterase 1 homolog protein_id : NP_080623.2

name	Adam17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347485 CCDS:CCDS25836.1 GeneID:11491 MGI:1096335
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0007219 - Notch signaling pathway [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : a disintegrin and metalloproteinase domain 17; TNF-alpha converting enzyme product : a disintegrin and metalloprotease domain 17 protein_id : NP_033745.4

name	Ywhaq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756039 CCDS:CCDS25837.1 GeneID:22630 MGI:891963
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0019904 - protein domain specific binding [Evidence IDA] GO_process : GO:0006605 - protein targeting [Evidence IDA]; GO:0007165 - signal transduction [Evidence TAS]; GO:0007264 - small GTPase mediated signal transduction [Evidence IPI] codon_start : 1 note : 14-3-3 theta; 14-3-3 tau product : tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide protein_id : NP_035869.1

name	LOC100043407 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262890 GeneID:100043407
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480598.1

name	LOC434693 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262893 GeneID:434693
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480607.1

name	LOC434693 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262895 GeneID:434693
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001480610.1

name	LOC100043416 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149262897 GeneID:100043416
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480613.1

name	EG668496 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149262899 GeneID:668496 MGI:3644608
definition	codon_start : 1 product : similar to LOC635138 protein isoform 1 protein_id : XP_001004831.2

name	EG432637 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921333 GeneID:432637 MGI:3649058
definition	codon_start : 1 product : hypothetical protein LOC432637 protein_id : NP_001004167.1

name	LOC625810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625810
definition	number : 1 pseudo : _no_value

name	LOC625810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625810
definition	number : 2 pseudo : _no_value

name	LOC625810 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:625810
definition	number : 3 pseudo : _no_value

name	3110053B16Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382686
definition	number : 3

name	3110053B16Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382686
definition	number : 2

name	3110053B16Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:382686
definition	number : 1

name	LOC100042796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042796
definition	number : 3 pseudo : _no_value

name	LOC100042796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042796
definition	number : 2 pseudo : _no_value

name	LOC100042796 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042796
definition	number : 1 pseudo : _no_value

name	EG668646 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668646
definition	number : 3 pseudo : _no_value

name	EG668646 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668646
definition	number : 2 pseudo : _no_value

name	EG668646 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668646
definition	number : 1 pseudo : _no_value

name	LOC668650 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668650
definition	number : 3 pseudo : _no_value

name	LOC668650 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668650
definition	number : 2 pseudo : _no_value

name	LOC668650 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668650
definition	number : 1 pseudo : _no_value

name	LOC668653 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668653
definition	number : 3 pseudo : _no_value

name	LOC668653 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668653
definition	number : 2 pseudo : _no_value

name	LOC668653 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668653
definition	number : 1 pseudo : _no_value

name	LOC668656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668656
definition	number : 3 pseudo : _no_value

name	LOC668656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668656
definition	number : 2 pseudo : _no_value

name	LOC668656 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668656
definition	number : 1 pseudo : _no_value

name	1700030C10Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262887 GeneID:69513 MGI:1916763
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs product : RIKEN cDNA 1700030C10 gene transcript_id : XR_035444.1

name	LOC546752 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149262888 GeneID:546752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins product : similar to neural visinin-like Ca2+-binding protein type 3 pseudo : _no_value transcript_id : XR_035702.1

name	6030426L16Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262891 GeneID:628850 MGI:1924364
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : RIKEN cDNA 6030426L16 gene transcript_id : XR_035730.1

name	EG668645 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149262805 GeneID:668645 MGI:3649104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 ESTs, 13 Proteins product : predicted gene, EG668645 pseudo : _no_value transcript_id : XR_033945.1

clone name	MSMg01-385I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-274C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-501K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-406L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-061L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-523G16.T7 (MSMg01no523_g16.b1)	MSMg01-523G16.TJ (MSMg01no523_g16.g1)
ACC	AG593740	AG593741
length	745	744
length of high quality (start - end)	576 (78 - 653)	469 (84 - 552)
definition	CHROMAT_FILE: MSMg01no523_g16.b1 PHD_FILE: MSMg01no523_g16.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:57:19 2005	CHROMAT_FILE: MSMg01no523_g16.g1 PHD_FILE: MSMg01no523_g16.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:57:19 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	plural
sequence	CCCCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC GGAATTCTCATATTGTTTCCCTGAACTGTAGAGTGAGGGCTATTATGGTT GGAAAGGCCAAATGGAAGCCTTTAGAGTTGCCTCTGCCAAAGAAAATAGT GAATCAAAAACAGTATCGTATTCCTGGAGGAATTGCAGAAATTACTGCCA CTATCAAGGACTTGAAAGATGCAGGGGTGGTGGTTCCTACCACATCTCCG TTTAACTCTCCTATCTGGCCAGTGCAGAAAACAGATGGATCATGGAGAAT GACAGTTGATTATCGAAAACTAAATCAGGTGGTAACTCCAATTGCAGCTG CTGTACCAGATGTAGTTTCGTTACTTGAGCAAATTAACACATCTCCTGGC ACCTGGTATGCGGCTATTGATCTGGCAAATGCCTTCTTCTCAGTACCTGT CCATAAGGACCACCAGAAGCAATTTGCTTTCAGTTGGCAAGGCCAACAGT ATACCTTCACAGTTTTGCCTCAAGGATATATTAACTCTCCTGCCCTGTGT CATAATTTAGTTAGAAGGGATCTTGATCGTTTGGATCTTCCACAAAATAT CACATTGGTGCACTATATTGATGACATTATGCTGATTGGACCAAGTGAGC AGGAAGTAGCAACCACTTTGGACTCATTGGTAACACATATGCGTATCAGA GGATGGGAAATAAATCCAACCAAAATTCAAGGACCATCTACCTTA	CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGGGTTACTTGAGAC CTTTTCCAAAAATAAATAAATAAATAAAACCCCAAAACCAAAACCTCACA CCAATTATCCACTCTGGGAATGACAGTAAATCTGATATCATTACCTAAAT ACAGATTTCCTGAGTTATCCCTGGGGAAGTTGTTTTTATTTTTCAGATCT TGAACCCAATCAAGGAGAACCTACCAACCATAGTCACCAGGTCTCTGCCC TCTTCCTTATCTTCAGTCTTTTTCTTTTTTCCTTCTTTCTAATGACACTG ACATTTTTAGAAATGTAGGCAAATCTTTTCCTGGAATGTACCTCACAGTT CCAGAATGTACAAAGGTGCTGTGTTGTCTTTTCCTCATTCAGGTTTAAAG TTTTTTGTTTTTTGTTTTTTTTTTTCCCTTTGGAGGAAACTAATATGTCA CATCAGGAGTCACCTGGCGTGTGTGTCTCTTCCTTGGCCAGGCCACGGGA CCATTCAGTGGTGGTAATAGCTGCTGTCTTTCCACATCTTGTCACCCAGC GGGCCTTACCCACTGTTTCTGCACGTGCCGCTGATTTCTGCTTGACACAG TTTTCCCCTTGGTGACTCTCAACTGGTGGTTTTCTATTGCTAGCTCTCTT CCTCTTTAATATTCCTTAACTGGCGTTCCCTCCCCGCTAAGGAG
quality values	Open. Hide. 8 8 8 8 8 8 8 8 8 8 11 13 15 10 10 10 11 11 20 11 10 10 11 14 19 29 28 20 20 20 14 11 7 9 9 11 13 9 9 9 9 9 15 15 15 16 15 19 22 23 25 19 19 19 22 29 29 33 21 21 11 11 8 8 8 8 8 8 10 23 21 24 25 19 25 19 22 12 27 23 37 37 41 41 47 47 48 57 48 48 48 48 48 50 48 50 50 57 57 57 57 57 57 59 59 59 57 54 54 54 54 54 59 54 54 47 44 32 30 37 37 41 34 43 46 48 57 57 57 57 57 57 47 44 44 44 44 54 48 57 57 68 59 50 50 46 46 46 46 50 50 50 50 50 50 50 68 68 68 68 68 57 57 50 50 50 50 50 57 57 57 57 57 52 52 52 57 57 57 50 50 50 50 50 42 57 43 57 57 57 57 57 57 52 54 54 59 57 57 57 59 57 57 57 57 57 57 57 57 57 57 57 57 59 68 68 57 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 57 57 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 44 43 39 43 43 39 35 39 39 43 43 62 62 62 62 68 68 68 62 62 62 62 52 52 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 57 57 57 57 43 43 31 43 43 57 57 57 57 57 57 52 52 52 44 44 57 57 43 44 43 52 43 38 32 20 38 38 57 57 54 57 57 57 57 57 45 43 42 44 36 23 23 43 44 52 52 52 52 52 59 59 43 39 39 43 50 50 57 57 57 57 57 57 54 52 52 52 37 37 43 43 39 50 50 44 44 37 37 37 50 43 43 44 57 57 43 43 43 46 47 57 57 59 44 44 33 35 35 47 42 42 37 37 37 41 41 20 20 20 32 32 32 32 30 26 26 26 25 32 32 32 43 43 46 48 47 47 37 44 33 43 43 46 42 43 35 29 29 37 37 43 44 43 48 48 48 39 39 32 37 28 30 30 39 37 37 28 28 28 37 33 39 36 39 37 28 28 13 14 13 28 28 37 39 40 40 40 43 43 43 39 34 32 23 23 23 32 34 39 37 37 30 28 28 28 25 26 39 39 34 34 25 25 25 34 32 39 39 34 31 26 20 13 21 15 19 19 12 12 12 19 17 31 28 33 33 28 30 28 23 23 28 21 24 21 24 22 15 21 11 12 11 21 19 25 21 21 23 24 23 28 14 14 14 26 22 21 11 12 11 12 12 22 26 17 14 14 10 11 8 11 11 16 24 15 14 12 11 10 10 10 12 15 19 15 12 10 10 10 13 16 16 15 15 11 14 16 23 24 28 22 19 24 24 20	Open. Hide. 8 8 9 8 12 11 7 8 8 8 12 8 14 14 20 20 22 22 34 30 31 35 26 34 22 22 27 15 12 17 9 9 9 9 9 12 9 9 9 14 14 18 18 24 22 18 25 30 37 37 36 36 37 37 37 37 26 27 12 16 10 9 9 9 15 13 23 28 28 21 28 29 33 36 33 47 47 47 57 57 57 43 43 40 43 43 47 44 57 57 57 57 59 57 57 57 57 46 46 47 47 54 59 59 40 33 33 33 41 48 57 68 54 54 57 57 57 57 47 47 47 57 57 57 57 57 57 59 48 48 46 46 43 44 59 59 57 57 57 57 57 57 57 54 47 50 47 47 57 57 57 57 57 57 57 57 57 57 57 57 52 52 52 52 43 43 59 50 52 52 52 57 57 52 52 52 52 52 44 44 52 52 52 57 57 57 57 57 57 57 59 59 57 57 57 57 57 57 68 68 57 57 68 68 68 59 59 57 52 52 44 44 57 57 57 44 44 43 52 52 57 59 59 68 68 68 68 68 68 68 68 68 59 59 59 59 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 57 57 57 57 57 57 52 52 57 57 57 57 57 52 52 57 59 57 57 57 57 52 57 57 57 57 57 59 59 59 59 59 59 57 57 57 59 57 57 57 57 57 52 52 52 44 47 52 52 43 43 43 52 57 52 52 43 52 52 52 43 43 39 43 43 52 52 54 57 59 57 57 54 57 57 50 50 43 50 50 57 54 54 57 59 59 43 43 35 42 42 48 48 57 59 44 44 43 44 44 59 59 59 57 48 48 48 59 59 44 44 30 30 30 44 44 57 57 43 43 43 59 59 54 54 54 59 59 59 59 57 57 54 54 54 57 43 43 36 36 36 43 43 48 48 48 48 43 43 39 43 37 37 39 43 39 39 37 37 26 26 19 23 23 22 24 30 34 37 37 37 32 41 34 34 28 28 28 37 37 37 33 30 28 37 33 36 36 39 27 34 30 24 24 24 28 28 24 24 32 28 28 21 25 13 16 17 28 24 21 15 14 19 19 23 23 18 18 12 12 12 14 15 14 24 24 36 29 28 21 14 14 18 27 32 32 32 19 14 14 24 24 31 39 32 32 19 19 19 19 16 21 26 24 17 13 10 8 10 17 19 18 14 12 24 21 28 28 28 32 32 36 43 39 34 28 24 24 24 30 30 33 24 24 23 32 23 24 14 14 14 24 24 25 28 33 33 28 28 22 28 19 21 14 21 18 13 13 9 11 11 16 18 18 22 26 14 14 14 21 19 22 25 21 17 14 19 24 15 17 11 11 11 16 11 9 14 8 9 10 9 9 10 10 20 20 13 13 13 20 24 15 14 13 12 13 12 19 20 23 19 14 12 17 11 8 10 9 11 11 10 13 10 10 13 10 10 8 8 8 11 9 10 10 15 15 18 14 19 12 13 10 10 10 11 11 12 21 17

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no523_g16.g1 MSMg01no523_g16.g1 CHROMAT_FILE:
MSMg01no523_g16.g1 PHD_FILE: MSMg01no523_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:19 2005
         (469 letters)



>mm_chr12_21581044_21581912
          Length = 869

 Score =  907 bits (469), Expect = 0.0
 Identities = 469/469 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgggttacttgagaccttttccaaaaataaataaataaataaaaccccaaaaccaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgggttacttgagaccttttccaaaaataaataaataaataaaaccccaaaaccaaaa 260

                                                                       
Query: 61  cctcacaccaattatccactctgggaatgacagtaaatctgatatcattacctaaataca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcacaccaattatccactctgggaatgacagtaaatctgatatcattacctaaataca 320

                                                                       
Query: 121 gatttcctgagttatccctggggaagttgtttttatttttcagatcttgaacccaatcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttcctgagttatccctggggaagttgtttttatttttcagatcttgaacccaatcaa 380

                                                                       
Query: 181 ggagaacctaccaaccatagtcaccaggtctctgccctcttccttatcttcagtcttttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagaacctaccaaccatagtcaccaggtctctgccctcttccttatcttcagtcttttt 440

                                                                       
Query: 241 cttttttccttctttctaatgacactgacatttttagaaatgtaggcaaatcttttcctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttttccttctttctaatgacactgacatttttagaaatgtaggcaaatcttttcctg 500

                                                                       
Query: 301 gaatgtacctcacagttccagaatgtacaaaggtgctgtgttgtcttttcctcattcagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatgtacctcacagttccagaatgtacaaaggtgctgtgttgtcttttcctcattcagg 560

                                                                       
Query: 361 tttaaagttttttgttttttgtttttttttttccctttggaggaaactaatatgtcacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttaaagttttttgttttttgtttttttttttccctttggaggaaactaatatgtcacat 620

                                                            
Query: 421 caggagtcacctggcgtgtgtgtctcttccttggccaggccacgggacc 469
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggagtcacctggcgtgtgtgtctcttccttggccaggccacgggacc 669


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space:   394281
Effective search space used:   394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information