Query= MSMg01no523_m13.b1 MSMg01no523_m13.b1 CHROMAT_FILE:
MSMg01no523_m13.b1 PHD_FILE: MSMg01no523_m13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:49 2005
(516 letters)
>mm_chr12_9020120_9021033
Length = 914
Score = 926 bits (479), Expect = 0.0
Identities = 504/513 (98%), Gaps = 2/513 (0%)
Strand = Plus / Minus
Query: 4 ggaattccttatttccaccctttattttcagactgtttgattaaaatgaaagctaatata 63
|||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 665 ggaattccttatttgaatcctttattttcagattgtttgattaaaatgaaagctaatata 606
Query: 64 gaagggtgttttggacaacggtgctaacctgaatacttgatttctgtcccttcatcccag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gaagggtgttttggacaacggtgctaacctgaatacttgatttctgtcccttcatcccag 546
Query: 124 ccttcttcacacttctcaatgagagctgagaggacagactctatggtgctcaggcaatgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ccttcttcacacttctcaatgagagctgagaggacagactctatggtgctcaggcaatgt 486
Query: 184 taatgattaaaattgctgcccaggagaatttccactagtttttaaaactttgttttcaag 243
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 485 taatgattaaaattgctgcccaggagaatttccactagttcttaaaactttgttttcaag 426
Query: 244 ttttctatattgatttaattctatacagcaaccacactttttaaaaaataaagtcattat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttttctatattgatttaattctatacagcaaccacactttttaaaaaataaagtcattat 366
Query: 304 ttatttttcaaatggacataaatacaatggctaaaaattactaatagagcacacttgtgc 363
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcatttttcaaatggacataaatacaatggctaaaaattactaatagagcacacttgtgc 306
Query: 364 tagacgaagaggattccagaagctgactctgtcaaagcatgcacatgagtcactttagat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tagacgaagaggattccagaagctgactctgtcaaagcatgcacatgagtcactttagat 246
Query: 424 agagtctccctacttctgactatgtttataaaagggcactggagggggctggagagatgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 --agtctccctacttctgactatgtttataaaagggcactggagggggctggagagatgg 188
Query: 484 ctcagtggttaagagcactgactgctcttccag 516
||||||||||||||||||||| |||||||||||
Sbjct: 187 ctcagtggttaagagcactgattgctcttccag 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 914
Length adjustment: 10
Effective length of query: 506
Effective length of database: 904
Effective search space: 457424
Effective search space used: 457424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_m13.g1 MSMg01no523_m13.g1 CHROMAT_FILE:
MSMg01no523_m13.g1 PHD_FILE: MSMg01no523_m13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:49 2005
(325 letters)
>mm_chr12_8816741_8817468
Length = 728
Score = 592 bits (306), Expect = e-173
Identities = 322/328 (98%), Gaps = 3/328 (0%)
Strand = Plus / Plus
Query: 1 tctttatcatgaagggatactgaaccttgccaaaagccttgcatccgctgagatgatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttatcatgaagggatactgaaccttgccaaaagccttgcatccgctgagatgatcat 260
Query: 61 atggtttctgtccttgagtgacagactcctgtcacacttgagcccagacagagctgttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggtttctgtccttgagtgacagactcctgtcacacttgagcccagacagagctgttta 320
Query: 121 ggtaatgactctcccctgcctttttttttttct--ttttgtgcatgtggtctactttgca 178
|||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 321 ggtaatgactctcctctgcctttttttttttttccttttgtgcatgtggtctactttgca 380
Query: 179 gcatcggatggcagtctgctatatgttaattgtatatgtctcaggcaaatgttcctacat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatcggatggcagtctgctatatgttaattgtatatgtctcaggcaaatgttcctacat 440
Query: 239 ttccccc-tctctctaaaatgcctgtcataaagtaatctgcttcataagcttcctgtgca 297
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcccccctgtctctaaaatgcctgtcataaagtaatctgcttcataagcttcctgtgca 500
Query: 298 ggtcatgtgattaaataaacaaatacac 325
||||||||||||||||||||||||||||
Sbjct: 501 ggtcatgtgattaaataaacaaatacac 528
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 728
Length adjustment: 9
Effective length of query: 316
Effective length of database: 719
Effective search space: 227204
Effective search space used: 227204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
