XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACATT
TAATCTGTTTTATATCAAAACAGGAATAGACGTGAGGTCAAACTTTCATC
ATGTAAGATTAAGGACTTCTATTCTATTACACATTCAGGAAACCAGACAG
GATAATTTCTTGTACATTAGACCATTAAGAATATTTGCTTAGTTAGTTTC
ATATGATGCAAAGACAATAGGAAAATTTCATAGTGGTATTTCCCATTTAG
ATCTTTACTCATACTTTACTCTCTTTTCATTGACTCTGTCTTTTATCACA
GGAAAGACTATAGTGAGAAATCCTTGTCAGTTTATACCAGAAAATATTCC
ATTTACTTATTTTCATTATTCCTAAGTCATATTATAATGTTAAAAAATTA
AGACGCCATATTTGTAGCCAGTGGGAAGTAATTAAAATACTGTTAAGCTC
CAATATCAAGCCAGGCAGTGGTGGCACACGCTTTTAATCTCAGCACTTGG
GAGGCAAAGGCAGGCAGATGTCTGAGTTCAAGGCCAGCCTGGTCTGCAGA
GTGAGTTCCAGGACAGCCAGGACTACACAGAGAAATCCTGTCTGGAAAAA
AAAAACAAAGCAAAATAAAACAAAAACAAACAAACAAATAAACAAAGGAT
CCAATATCAAGTATAAACTATCAAGGATAAAACACTGATTATAAATACAT
TTGAACTATAATAACATAATTTGGCAGGGAGAATTAATTGTTTTACTTGA
TTCTTGATAAACAGGTAAGTGATTTT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAAGATGTTTGGGAAAGTATATTTACATCAGCTCC
TGTATCCACCAAAACTTCTATGTCAGCACCATTCATTGGTACCAGTAATT
TGGGTCACTAATCATTAACAGCTCTTTGTCAGAATGCATATTTCCCATAC
TCCCAAAAGTCTGTTTTCTTTCTATTGGAATATTCTTGCCCTTGATGTAA
TGAATCAATAACAGCTGAACAATTATGTCCTCTGCATTAATTTGCATCTC
CTTTTTCACATTTGTTATAATCTTAATTGCTTCCTTGCTGCTCCAATATA
CTATACATGGATGGACTATAAATAATGATCAGGAATAGTTTTCAATATCT
TATCTGCTTGGTGCCTCCTGGGCGATCAAAAAAAGATGGGTTGTATTTTT
TCTGTGGAGTCTAGAGCTGTCAGTCCCATTTGTTTGTTTTCTAATGGCAA
GAGGTTACCTCGTATGACTCTTTTGTACTTACAGTCTTTAGACTTATGTT
TGTACTTTCCATAGTGGCTTCAAAAACCTAGAAGCCATTGTGTTTCATTG
TAGCCAAAGCCTGCTTGTTCTCTTTTACAATGCCATATTTCCCTGAGTCA
ATGTACCTGCTATTTTGAGCTCTGAATCTTCTGGCCTTACAATTTCTTTG
GAAATGGTCACTTCTCCACAATTAAAGCAACAAGCACTTTCATTTCTGAA
AATTCTAGCTACTACTTGTCCTGTGATATTGGCATGAA

Query= MSMg01no525_c20.b1 MSMg01no525_c20.b1 CHROMAT_FILE:
MSMg01no525_c20.b1 PHD_FILE: MSMg01no525_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:41 2005
         (594 letters)



>mm_chr12_96628438_96629425
          Length = 988

 Score =  969 bits (501), Expect = 0.0
 Identities = 568/597 (95%), Gaps = 14/597 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacatttaatctgttttatatcaaaacaggaatagacgtgaggtcaaactttcat 64
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaattcacatttaaacagttttatatcaaaacaggaatagacgtgaggtcaaactttcat 558

                                                                       
Query: 65  catgtaagattaaggacttctattctattacacattcaggaaaccagacaggataatttc 124
           ||||||| |||||||||     |||||||||||||||||||||||||||||||||| |||
Sbjct: 557 catgtaaaattaaggac-----ttctattacacattcaggaaaccagacaggataagttc 503

                                                                       
Query: 125 ttgtacattagaccattaagaatatttgcttagttagtttcatatgatgcaaagacaata 184
           ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 502 ttgtacattagaccattaagaatatttacttggttagtttcatataatgcaaagacaata 443

                                                                       
Query: 185 ggaaaatttcatagtggtatttcccatttagatctttactcatactttactctcttttca 244
           |||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||
Sbjct: 442 ggaaaatttcatagtggtgtttcccatttagatctttactcataatgtactctcttttca 383

                                                                       
Query: 245 ttgactctgtcttttatcacaggaaagactatagtgagaaatccttgtcagtttatacca 304
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 382 ttgactctgtcttttatcacaggaaagactaaagtgagaaatccttgtcagtttatacca 323

                                                                       
Query: 305 gaaaatattccatttacttattttcattattcctaagtcatattataatgttaaaaaatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gaaaatattccatttacttattttcattattcctaagtcatattataatgttaaaaaatt 263

                                                                       
Query: 365 aagacgccatatttgtagccagtgggaagtaattaaaatactgttaagctccaatatcaa 424
           |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 262 aagacgccatatttgtagccagtgggaaataattaaa-tactgttaagctccaatatcaa 204

                                                                       
Query: 425 gccaggcagtggtggcacacgcttttaatctcagcacttgggaggcaaaggcaggcagat 484
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 203 gccaggcagtggtggcacacgcctttaatctcagcacttgggaggcaaaggcaggcagat 144

                                                                       
Query: 485 gtctgagttcaaggccagcctggtctgcagagtgagttccaggacagccaggactacaca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gtctgagttcaaggccagcctggtctgcagagtgagttccaggacagccaggactacaca 84

                                                                    
Query: 545 gagaaatcctgtctgg-------aaaaaaaaaacaaagcaaaataaaacaaaaacaa 594
           ||||||||||||||||       |||||||||| |||||||| |||| |||||||||
Sbjct: 83  gagaaatcctgtctgggaaaaaaaaaaaaaaaaaaaagcaaattaaa-caaaaacaa 28


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 988
Length adjustment: 10
Effective length of query: 584
Effective length of database: 978
Effective search space:   571152
Effective search space used:   571152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)