Query= MSMg01no525_m21.b1 MSMg01no525_m21.b1 CHROMAT_FILE:
MSMg01no525_m21.b1 PHD_FILE: MSMg01no525_m21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:32 2005
(610 letters)
>mm_chr12_95518357_95519365
Length = 1009
Score = 1094 bits (566), Expect = 0.0
Identities = 596/606 (98%), Gaps = 1/606 (0%)
Strand = Plus / Plus
Query: 5 gaattccatgattttccacattaattccaaaataactaaagattggtaaatctggcaaac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgatttaaaacattaattccaaaataactaaagattggtaaatctggcaaac 264
Query: 65 aaatgataacaagttaaaaccatatgacataaatataagatttatataatgttaaaaatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatgataacaagttaaaaccatatgacataaatataagatttatataatgttaaaaatg 324
Query: 125 ttaatcctttacaatataaatagaagacagtgctatttttgaaaatcatgctaggttttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaatcctttacaatataaatagaagacagtgctatttttgaaaatcatgctaggttttg 384
Query: 185 aaaaacttggcatctcagatagtttggaaatttactcagattgaacagtttagtaatatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaacttggcatctcagatagtttggaaatttactcagattgaacagtttagtaatatc 444
Query: 245 tcatttcagctttagtttctgtagtctataacttcatataaagttaccaatatacacttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcatttcagctttagtttctgtagtctataacttcatataaagttaccaatatacacttc 504
Query: 305 atttattagcatttaaaaatcaacatataggcataaattagatatatgtttaatttgcta 364
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 505 atttattagcatttaaaaatcagcatataggcataaattagatttatgtttaatttgcta 564
Query: 365 catgttagtgtgtttctttatgaattatatgtaaagtagagatagacaattagaaagcaa 424
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 catgttagtgtgtttctttatgagttatatgtaaagtagagatagacaattagaaagcaa 624
Query: 425 agatacattgttaatcctaagattaacaaaaacaaaacacaaaaaatctaaaaaaaaagt 484
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||
Sbjct: 625 agatacattgttaatcctaagaatcacaaaaacaaaacacaaaaaatctaaaaaaaa-gt 683
Query: 485 ataaatgtgtgaccaaaatgagtcaatttactttaaaaatacatttaaatattaaactct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ataaatgtgtgaccaaaatgagtcaatttactttaaaaatacatttaaatattaaactct 743
Query: 545 atctggcagttaatttggtactttcccttttcatgtttttgtaactgactctacagatct 604
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atctggcagttgatttggtactttcccttttcatgtttttgtaactgactctacagatct 803
Query: 605 catagc 610
||||||
Sbjct: 804 catagc 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1009
Length adjustment: 10
Effective length of query: 600
Effective length of database: 999
Effective search space: 599400
Effective search space used: 599400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_m21.g1 MSMg01no525_m21.g1 CHROMAT_FILE:
MSMg01no525_m21.g1 PHD_FILE: MSMg01no525_m21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:32 2005
(602 letters)
>mm_chr12_95652820_95653821
Length = 1002
Score = 1069 bits (553), Expect = 0.0
Identities = 571/577 (98%)
Strand = Plus / Minus
Query: 1 ttgatgaaatgttatgatagttgccaagtctccatttcaaccatgaacaaaattatctcc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 577 ttgatgaaatgttatgatagttgccaagtctccatttaaaccatgaacaaaattatctcc 518
Query: 61 ctctatttctcattactaagagaaaaaataatggtacattttcttgcattgttctcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctctatttctcattactaagagaaaaaataatggtacattttcttgcattgttctcaagc 458
Query: 121 cttgtatcttccaatgccaagtttggacagaatagaaacaatactactaatttaaaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cttgtatcttccaatgccaagtttggacagaatagaaacaatactactaatttaaaactg 398
Query: 181 gggatgttctaggcaacaatatttgtgacatcagtaactgttgctgctcagaacaaagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gggatgttctaggcaacaatatttgtgacatcagtaactgttgctgctcagaacaaagca 338
Query: 241 gtaccatgtgatctctcaatttcctcatcagacaaagatagaaatcatgtccattcaggg 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 337 gtaccatgtgatctctcaatttcctcatcaggcaaagatagaaatcatgtccattcaggg 278
Query: 301 tgattcacagagagaagaaagtgtgattattagttttgaggttcgttgttgttgttttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tgattcacagagagaagaaagtgtgattattagttttgaggttcgttgttgttgttttgt 218
Query: 361 tttgatattgtgagttctatgcaagttaaaatcatcttaaaagagagaaatccgactgga 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tttgatattgtgagttcgatgcaagttaaaatcatcttaaaagagagaaatccgactgga 158
Query: 421 aaatgtctccatcaaaacagcctgtaggtaagtctgtggtggaactctggtggctgaggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aaatgtctccatcaaaacagcctgtaggtaagtctgtggtggaactctggtggctgaggc 98
Query: 481 taggattagggttgctatccttgggaaggtagttctggattttattaaaaagtaaaaaat 540
||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 97 tagtattagagttgctatccttgggcaggtagttctggattttattaaaaagtaaaaaat 38
Query: 541 aaaaaaataaaaaacataatttaaaaaaagctaaatt 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 aaaaaaataaaaaacataatttaaaaaaagctaaatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
