Query= MSMg01no526_h09.b1 MSMg01no526_h09.b1 CHROMAT_FILE:
MSMg01no526_h09.b1 PHD_FILE: MSMg01no526_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:23 2005
(629 letters)
>mm_chr12_92818305_92819333
Length = 1029
Score = 1131 bits (585), Expect = 0.0
Identities = 606/613 (98%), Gaps = 1/613 (0%)
Strand = Plus / Minus
Query: 17 ggaattcattcaaaattagaactatctctaatggcacagggagtaactcccctcccctcc 76
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 891 ggaattcattcaaaagtagaactatctctaatggcacagggagtaact-ccctcccctcc 833
Query: 77 aaagaaaagaaaacagaaaacccaacaaaaacaagccagggtctcactttggagccctgg 136
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 aaagaaaagaaaaccgaaaacccaacaaaaacaagccagggtctcactttggagccctgg 773
Query: 137 ctggccttgaaaacagatccacctgcccctgtctcccaagtgcttcagattaaagacatg 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ctggccttgaaaacagatccacctgcccctgtctcccaagtgcttcagattaaagacatg 713
Query: 197 catcaggatgcccagcctaagtgactgccttctttggggctatggaactttgctaagttt 256
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 712 catcaggatgcccagcctaagtgactgccttctttagggctatggaactttgctaagttt 653
Query: 257 cattttagaaactgaacatcaagggctatgggatagtctaaggttacttaacagaaagtc 316
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 652 cattttagaaactgaacatcaagggctatgggatagtctaaggttatttaacagaaagtc 593
Query: 317 gtttggtactgtaagaaatatagtaccgttacagtagcagccagtctggcagataggccg 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtttggtactgtaagaaatatagtaccgttacagtagcagccagtctggcagataggccg 533
Query: 377 cactaagcctctgctccagagtctgactaagtggggtagcagagtgggaccaagctgctt 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cactaagcctctgctccagagtctgactaagtggggtagcagagtgggaccaagctgctt 473
Query: 437 tttaaaaaatagtgtactagtttcctcttagctacagtctttctttaaaacttttaaaaa 496
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 472 tttaaaaaatagtgtactagtttccccttagctacagtctttctttaaaacttttaaaaa 413
Query: 497 atgtgtgtggtgttttgcttgcatgtatgtctgcaccatgtgtgtgcttggtgcttgtgg 556
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atatgtgtggtgttttgcttgcatgtatgtctgcaccatgtgtgtgcttggtgcttgtgg 353
Query: 557 aggccagtggatggcattggatttcttagaactggggttgcacatactattgagagcttc 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aggccagtggatggcattggatttcttagaactggggttgcacatactattgagagcttc 293
Query: 617 atgtgagtactgg 629
|||||||||||||
Sbjct: 292 atgtgagtactgg 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_h09.g1 MSMg01no526_h09.g1 CHROMAT_FILE:
MSMg01no526_h09.g1 PHD_FILE: MSMg01no526_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:23 2005
(605 letters)
>mm_chr12_92634013_92635017
Length = 1005
Score = 1154 bits (597), Expect = 0.0
Identities = 603/605 (99%)
Strand = Plus / Plus
Query: 1 ttttctgcccagacctgggagatttcttccagaaacttctggagcagtggactcagagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttctgcccagacctgggagatttcttccagaaacttctggagcagtggactcagagaa 260
Query: 61 gggaaattagtatttctcttctagggccaagatcagaacatccagcactcccactccctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggaaattagtatttctcttctagggccaagatcagaacatccagcactcccactccctc 320
Query: 121 taggccaacatggtttgggctcctattatggtgagggaggttgcttcccagtagaggata 180
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 taggccaacgtggtttgggctcctattatggtgagggaggttgcttcccagtaggggata 380
Query: 181 tgggcatctaggcatgaccataaatgaatgggttatacctcccactctcagctccacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggcatctaggcatgaccataaatgaatgggttatacctcccactctcagctccacatt 440
Query: 241 tctttgtacagtcaatgcacagcacttggtgcctgttgcccctcacacccattttctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttgtacagtcaatgcacagcacttggtgcctgttgcccctcacacccattttctggt 500
Query: 301 ctgacagtagccccaaaggttgtttcaaaatagtgttgtgccctgtgtctagcaaaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgacagtagccccaaaggttgtttcaaaatagtgttgtgccctgtgtctagcaaaaagt 560
Query: 361 ctatgggcttcccctccacttttagagttacccagggctcatgaagtgggattgagccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctatgggcttcccctccacttttagagttacccagggctcatgaagtgggattgagccct 620
Query: 421 gatgccctcagtcctctagtcctttggaccctttcttgggtttttcttagggcattcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatgccctcagtcctctagtcctttggaccctttcttgggtttttcttagggcattcatt 680
Query: 481 tttccaataccctatctctttgtaataggcacattggtctctctgtcacggagggtggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttccaataccctatctctttgtaataggcacattggtctctctgtcacggagggtggat 740
Query: 541 ttcttcttcagtcaggactggcttatctctgccctttccataaaccacagttttcagctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcttcttcagtcaggactggcttatctctgccctttccataaaccacagttttcagctc 800
Query: 601 tcttt 605
|||||
Sbjct: 801 tcttt 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
