AATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCACATAATATCGAAGACAATTACTCCAGTTAAATAGTCCAAATA
GACATCTTATATCACCAAGTAAAACTTGTATGTATGTATGTATGTATGTA
TGTATGTATGTATGTATGTTACATATTGTTGCAGCCTTGGCAAAGGGGTC
CCTTGGAAACCTAAATATCAAAGGCTATGCCAAGGGCACAAGTTACTCTC
CACGGTGTGATTATAAAGGTCTATAGATAAAGACAACACTTTTGGAACTG
AATATGGAAAAGTCAAGCTAGTTAGAAGTTTCACCCCTATTGAATAACTA
GCTTTCATGGTATTACAATATATCGTCATGTTATTAGAAGAGCAATATAA
TCATCAGTATCATCTAGCTATAAGCTCCGTGTCCTACAAGTGACCTGCCT
GAAAGATGTATTTGTAAGATAGTGGCACAAATGTTATAGCAATAACCAAA
CAGTATTTTTTTTAATTGGACTTAAGGTCCCCTCAATGAGATGTAACTCA
TCCTTGCTATTGCTAAAGAGAGCAAGAAACTATATAGACCCACGAAGAAA
ACCTTTCACCCTCAAACTCCTTTACTCAGGACTCAGGGATTGACACAGAA
GGGGGGGGGGTAGAAAGATTATGGTAGTTAGAGATGATAAATAACTCCAT
CTTTCAGACCCAAGGCTGGTGTACATGTATACTCCTAGAGCTTGAGTTCA
GTATGCCCAAGACCTCG

NACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCCCGACTGGACCCTGACATTTCTTT
CTAAACCTCTGTTTTCTCAGAATTTTGAATGTAAACTACACAGATGCCCT
CCCCACAAGATAGCTGGAGCAAGGGCTGAGTTCAGTCCCAGGGGCTGGCT
CCAAGAAAGGTCTAACCCTCGGGTGCTCGTGCAGGTGTTTTGTTAGGTGT
GTCTTCAGATGGATGTGACAGTTTTTCTCTCACTGAGGGAGCATCTGGCC
ATCTGTCGAAGACACGATGTGACGGAAATTAGTGTTGGCCTCATTTTAAA
TCTTCCTTCATCTCAATTTGCAGGGAAGGCATGCCGATGAGTAGAGAGAC
TCTCTGAGTGTGAAACACAGGATGAAGGCATGCATATATGAGGATAAAAG
GTAATTTGATAATAGACTTGTTTTCTAGTTTGTATTTTAATTAATGTGTT
CTATAGCATGCAGTCAATATGATAGATGATACAATCTACACATAAAACCA
CACATTAGCAAATAGAGGGACAATACAGAAATTGAGAAAAATATAGCAAA
AATTCACTTATTGATTGTTTTTAACTAACCTATCTATTATTAGCACATTT
TAAAAGTAATTCTCTTTTTTTGAGGATATATTATAACTACATCATAATTT
TTCTTTTACTCCCCCTGAACACTTTCATGGACCCCCTGGNTCTTTTCTAT
TCATGGGCACCTTTTTTAGGGACAAATAAA

Query= MSMg01no527_j23.g1 MSMg01no527_j23.g1 CHROMAT_FILE:
MSMg01no527_j23.g1 PHD_FILE: MSMg01no527_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:55 2005
         (521 letters)



>mm_chr12_98614467_98615387
          Length = 921

 Score =  922 bits (477), Expect = 0.0
 Identities = 510/521 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   cccgactggaccctgacatttctttctaaacctctgttttctcagaattttgaatgtaaa 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| 
Sbjct: 201 cccgactggaccctgacatttctttctaaacctctcttttctcagaattttgaatgtaag 260

                                                                       
Query: 61  ctacacagatgccctccccacaagatagctggagcaagggctgagttcagtcccaggggc 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacacagatgccctccccgcaagatagctggagcaagggctgagttcagtcccaggggc 320

                                                                       
Query: 121 tggctccaagaaaggtctaaccctcgggtgctcgtgcaggtgttttgttaggtgtgtctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggctccaagaaaggtctaaccctcgggtgctcgtgcaggtgttttgttaggtgtgtctt 380

                                                                       
Query: 181 cagatggatgtgacagtttttctctcactgagggagcatctggccatctgtcgaagacac 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagatagatgtgacagtttttctctcactgagggagcatctggccatctgtcgaagacac 440

                                                                       
Query: 241 gatgtgacggaaattagtgttggcctcattttaaatcttccttcatctcaatttgcaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgtgacggaaattagtgttggcctcattttaaatcttccttcatctcaatttgcaggg 500

                                                                       
Query: 301 aaggcatgccgatgagtagagagactctctgagtgtgaaacacaggatgaaggcatgcat 360
           ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaggcattccaatgagtagagagactctctgagtgtgaaacacaggatgaaggcatgcat 560

                                                                       
Query: 361 atatgaggataaaaggtaatttgataatagacttgttttctagtttgtattttaattaat 420
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 atatgaggataaaaggtaatttgataatagacttgctttctagtttgtattttaattaat 620

                                                                       
Query: 421 gtgttctatagcatgcagtcaatatgatagatgatacaatctacacataaaaccacacat 480
           ||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||
Sbjct: 621 gtgttctatagcatgcagtcaatttgatagataatacaatctacacataaaaccatacat 680

                                                    
Query: 481 tagcaaatagagggacaatacagaaattgagaaaaatatag 521
           |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagccaatagagggacaatacagaaattgagaaaaatatag 721


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space:   465521
Effective search space used:   465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)