Query= MSMg01no528_k23.b1 MSMg01no528_k23.b1 CHROMAT_FILE:
MSMg01no528_k23.b1 PHD_FILE: MSMg01no528_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:21 2005
(661 letters)
>mm_chr12_76199751_76200811
Length = 1061
Score = 1255 bits (649), Expect = 0.0
Identities = 655/657 (99%)
Strand = Plus / Plus
Query: 5 gaattctttgttcttattagtaatgtctgaaacaagttctcttaactatttcaatgaaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgttcttattagtaatgtctgaaacaagttctcttaactatttcaatgaaga 264
Query: 65 caggaggaattgcaagctcacccactgcaagatccctatcagttagagtaaaagggaact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caggaggaattgcaagctcacccactgcaagatccctatcagttagagtaaaagggaact 324
Query: 125 tagataattggaagcatgttgatggattaaataaagaagatgtgtttttgttcctacacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagataattggaagcatgttgatggattaaataaagaagatgtgtttttgttcctacacc 384
Query: 185 aaaaggacgacttcaatagagaaacaaaagtcctccttgggtcatttatttctaaatgta 244
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaggatgacttcaatagagaaacaaaagtcctccttgggtcatttatttctaaatgta 444
Query: 245 ccataacatccctgaagtcactttaaacaattattattagttatacatcccagaaacatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccataacatccctgaagtcactttaaacaattattattagttatacatcccagaaacatg 504
Query: 305 aacaatgttagtggtataaacctatcatctatgctaacatagatattgtgtatctcctaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacaatgttagtggtataaacctatcatctatgctaacatagatattgtgtatctcctaa 564
Query: 365 aaataatcggttttgccaatatagaaaacattgtcattaattagacatattcctattaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaataatcggttttgccaatatagaaaacattgtcattaattagacatattcctattaat 624
Query: 425 tttaatttttagattttagtactgaccatgaaatacaatagattctaaaattcaaacaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttaatttttagattttagtactgaccatgaaatacaatagattctaaaattcaaacaga 684
Query: 485 ttcattagatgtatagtctagttggcctaaaaacttggaattataagaaaatagtgttgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcattagatgtatagtctagttggcctaaaaacttggaattataagaaaatagtgttgc 744
Query: 545 ccagtccctgatatctataactcctcagtaacggtgggaacaatggaagagggaggggaa 604
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ccagtccctgatatctatacctcctcagtaacggtgggaacaatggaagagggaggggaa 804
Query: 605 tcacaagccccaccccaaagggaagctaccgacaggaaacggtttcgggaggaagga 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcacaagccccaccccaaagggaagctaccgacaggaaacggtttcgggaggaagga 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_k23.g1 MSMg01no528_k23.g1 CHROMAT_FILE:
MSMg01no528_k23.g1 PHD_FILE: MSMg01no528_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:21 2005
(517 letters)
>mm_chr12_76377080_76377991
Length = 912
Score = 748 bits (387), Expect = 0.0
Identities = 409/419 (97%), Gaps = 5/419 (1%)
Strand = Plus / Minus
Query: 99 attatgattatgtgtatatgatctatgtgtgtatgcatatacacatgtgtgcatgtgtgt 158
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 attatgattatgtatataagatctatgtgtgtatgcatatacacatgtgtgcatgtgtgt 853
Query: 159 catgatgtatgtgtggacatcagaaagcactattcagaggttagctctcactttctatca 218
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 852 catgatgtatgtgtggacatcagagagcactattcagaggttagctctcactttctatca 793
Query: 219 tgtgagttccaggtattgaactcatgtcattagcctttggttgcaagtgttttgtacctg 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tgtgagttccaggtattgaactcatgtcattagcctttggttgcaagtgttttgtacctg 733
Query: 279 ctgagccatctccctgttccatattatctcttctttgtcaaaagattattttattttatt 338
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 732 ctgagccatctccctgttccatattatctcttctttgtcaaaaga-----ttattttatt 678
Query: 339 tgtattcagtgtgatgatgagactttttatcacagtgttggtctgatgttcagtggagtt 398
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 677 tgtattcagtgtgatgatgagacttttcatcacagtgttggtctgatgttcagtggagtt 618
Query: 399 gaaaggttgatagcattatgtacatctaaaaaggaaacaagggggcatgcttttgaaaag 458
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 617 gaaaggttgatagcattatgtacatctaaaaagggaacaagggggcatgcttttgaaaag 558
Query: 459 tgttaagaaatattaatgactcacaagggaaacacacatgatctctaaaaccttctgac 517
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgttaagaaatattaatgactcacaagggaaacacacatgatctctaaaaccttctgac 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 912
Length adjustment: 10
Effective length of query: 507
Effective length of database: 902
Effective search space: 457314
Effective search space used: 457314
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
