NCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCATCTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGCCC
CCTATCCGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCC
TTTTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTT
ATGAGGTCCCATTTATCGATTCTTGATCTTACAGAACAAGCCATTGCTGT
TCTATTCAGGAATTTTTCCCCTGTACCCATATCTTCAAGGCTTTTCCCTA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTA
ATCCACTTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATCAATTTG
CATTCTTCTACATGATAACCGCCAGTTGTGCCAGCGCCATTTGTTGAAAA
TGCTGTCTTTTTTCCACTGGATGGTTATAGCTCCCTTGTCAAAGATCAAG
TGACCATAGGTGTGTGGATTCATCTCTGGGTCTTCAATTCTGTTCCATTG
GTCTACTTGTCAGTCACTATACCAGTACCATGCAGTTTTGATCACAATTG
CTCTGTAGTACAGTTTTAGGTCAGGCATGGTGATTCCACCGAAGATCTTT
TATCCTTGAGAAGAGTTTTGCTATCCTCGTTTTTTGTTATTCAGATGAAT
CTGC

NAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCACAGCGTGGTGGGGTGTCCT
AAGTATGGCATCTTAATCTAGTCTTCACTTACAATGTTATGTCCAGTAAT
AAGAATTAAGTAATTTTTATTGAGTTATGGGTGTGTGGGCAATGACCAGC
TCTAGACGGCAGTAAACAGCATCCTGTAGAATCTGAACGATGTCCGGGCT
TCAGAATTTTAGGATCAATTCTCAGATAGGAATGTCCAAGATTCCTACAA
TGTGAGGGAGTCCGCTGTTGTCTTCTCCTGCTAGTGACCACGAGCTAGAG
CAGAGATATGTAGCCCAGAGATGGATGCTATGTGCATAAGGATACAGGAC
TGAATACAGCCTCAGGTTGACCGAGGAGTGTTATTTACACGACACCATTC
CTTAATATCAAAAGATCAATTGGCAGCTCTTACAGTTGGGTGTTTGGAAT
GACTATGGGGTGGGGTATGTATAAAGGAGGCTAGTCAGGAAGATATAAGG
AGGAAGGAATTGTTGTTATTCACAGATACTAGATGAATCCTCAACTGATC
AGAAGCAACTGAGGGGTCATTTTTCTTTTCCTCCTTGCAAATTATAGTCT
TAAAATTGTACTGCATAGTGACTAATCATAAAGAAGCATTTATGAGATAT
AAAATGATACTATTCTATATGCATGTATATATACAATGTAAAATGACTGA
CTCA

Query= MSMg01no529_a24.g1 MSMg01no529_a24.g1 CHROMAT_FILE:
MSMg01no529_a24.g1 PHD_FILE: MSMg01no529_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:52 2005
         (656 letters)



>mm_chr12_11445252_11446307
          Length = 1056

 Score = 1166 bits (603), Expect = 0.0
 Identities = 648/675 (96%), Gaps = 19/675 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacagcgtggtggggtgtcctaagtatggcatcttaatctagtcttcacttacaatgtta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cacagcgtggtggggtgtcctaagtatggcatcttaatctagtcttcacttacaatgtta 241

                                                                       
Query: 61  tgtccagtaataagaattaagtaatttttattgagttatgggtgtgtgggcaatgaccag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgtccagtaataagaattaagtaatttttattgagttatgggtgtgtgggcaatgaccag 301

                                                                       
Query: 121 ctctagacggcagtaaacagcatcctgtagaatctgaacgatgtccgggcttcagaattt 180
           ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 302 ctctagatggcagtaaacagcatcctgcagaatctgaacgatgtccgggcttcagaattt 361

                                                                       
Query: 181 taggatcaattctcagataggaatgtccaagattcctacaatgtgagggagtccgctgtt 240
           |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 362 taggatcagttctcagataggaatgtccaagattcctacagtgtgagggagtccgctgtt 421

                                                                       
Query: 241 gtcttctcctgc-------------------tagtgaccacgagctagagcagagatatg 281
           ||||||||||||                   |||||||||||||||||||||||||||||
Sbjct: 422 gtcttctcctgcatgcaaatgcaggtgtccctagtgaccacgagctagagcagagatatg 481

                                                                       
Query: 282 tagcccagagatggatgctatgtgcataaggatacaggactgaatacagcctcaggttga 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tagcccagagatggatgctatgtgcataaggatacaggactgaatacagcctcaggttga 541

                                                                       
Query: 342 ccgaggagtgttatttacacgacaccattccttaatatcaaaagatcaattggcagctct 401
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 542 ccgaggagtgttatttacacgacaccattccttaatatcaaaaaatcaattggcagctct 601

                                                                       
Query: 402 tacagttgggtgtttggaatgactatggggtggggtatgtataaaggaggctagtcagga 461
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tatagttgggtgtttggaatgactatggggtggggtatgtataaaggaggctagtcagga 661

                                                                       
Query: 462 agatataaggaggaaggaattgttgttattcacagatactagatgaatcctcaactgatc 521
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agatataaggaggaaggaattgttgttattcacagatactagatgaatcctcaactgatc 721

                                                                       
Query: 522 agaagcaactgaggggtcatttttcttttcctccttgcaaattatagtcttaaaattgta 581
           |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 722 agaagcaattgaggggtcatttttcgtttcctccttgcaaattatagtcttaaaattgta 781

                                                                       
Query: 582 ctgcatagtgactaatcataaagaagcatttatgagatataaaatgatactattctatat 641
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ctgcatagtgactaatcataaagaagcatttatgagatataaaatgatactattctatat 841

                          
Query: 642 gcatgtatatataca 656
           |||||||||||||||
Sbjct: 842 gcatgtatatataca 856


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)