Query= MSMg01no529_h08.b1 MSMg01no529_h08.b1 CHROMAT_FILE:
MSMg01no529_h08.b1 PHD_FILE: MSMg01no529_h08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:26 2005
(655 letters)
>mm_chr12_31258731_31259786
Length = 1056
Score = 1255 bits (649), Expect = 0.0
Identities = 652/653 (99%), Gaps = 1/653 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaatgaatggtggggcagtttttttgac-aaaaaaaaaaaaagtggtattcaga 62
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 856 ggaattcaatgaatggtggggcagtttttttgacaaaaaaaaaaaaaagtggtattcaga 797
Query: 63 aaccgtgtctataaaccgtgcctatagaaacataattggcagaaccgagcttatgggtag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aaccgtgtctataaaccgtgcctatagaaacataattggcagaaccgagcttatgggtag 737
Query: 123 tgcatttttcatcggtgcatatatcagctcttgatgtcattaggcttataggaacggaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgcatttttcatcggtgcatatatcagctcttgatgtcattaggcttataggaacggaga 677
Query: 183 tgttacagtcagtctctggcctgcttgagagttgtcactgatgttctgggtacctttctg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgttacagtcagtctctggcctgcttgagagttgtcactgatgttctgggtacctttctg 617
Query: 243 cactatggtggctgctttcacgctgaggtgcctcgtgttcagtggatgaaactgcagaag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cactatggtggctgctttcacgctgaggtgcctcgtgttcagtggatgaaactgcagaag 557
Query: 303 tttactttttcacagtcctggaattggaacttctcagctactatggtgcagggctgcttt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttactttttcacagtcctggaattggaacttctcagctactatggtgcagggctgcttt 497
Query: 363 catctgagattttgctccttggtttgcagatgctggacaagtccctaaagaagatgccag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 catctgagattttgctccttggtttgcagatgctggacaagtccctaaagaagatgccag 437
Query: 423 cagcagtggtgggaagacacagtcaaaagctcttcacagcagcagggggcatttgtttta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cagcagtggtgggaagacacagtcaaaagctcttcacagcagcagggggcatttgtttta 377
Query: 483 gaaacctacactcaggcagggcagggtcctgtgccagagaacagttcaggactagcaaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaaacctacactcaggcagggcagggtcctgtgccagagaacagttcaggactagcaaga 317
Query: 543 gtgaggtagacttagtaagcttaggaaaaaggcagtacacagtctcaagaaatgaatgtt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtgaggtagacttagtaagcttaggaaaaaggcagtacacagtctcaagaaatgaatgtt 257
Query: 603 agcttcttaatagacacacacacctcctcgtctttactatagctacgcttatg 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agcttcttaatagacacacacacctcctcgtctttactatagctacgcttatg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_h08.g1 MSMg01no529_h08.g1 CHROMAT_FILE:
MSMg01no529_h08.g1 PHD_FILE: MSMg01no529_h08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:26 2005
(646 letters)
>mm_chr12_31093576_31094621
Length = 1046
Score = 1234 bits (638), Expect = 0.0
Identities = 644/646 (99%)
Strand = Plus / Plus
Query: 1 agccctaagctcctagaattctgctcacattttgcagtcagatatcattcaaaaatatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccctaagctcctagaattctgctcacattttgcagtcagatatcattcaaaaatatct 260
Query: 61 aacctttggtgaagacactaatagaaaagccattaaagatagtcacttgcaattccatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacctttggtgaagacactaatagaaaagccattaaagatagtcacttgcaattccatta 320
Query: 121 tcaaactgcaaaagagatttgtactaaatcatatttcttccaacattaatctcattacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaactgcaaaagagatttgtactaaatcatatttcttccaacattaatctcattacaa 380
Query: 181 gttgggtttgaggaaaaagccacttaactgtgcccctgaaccagctggaacccttgacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttgggtttgaggaaaaagccacttaactgtgcccctgaaccagctggaacccttgacta 440
Query: 241 ttttccttggcatgaatatactatatactgttctggggtatcatgacctgtgtcttacga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttccttggcatgaatatactatatactgttctggggtatcatgacctgtgtcttacga 500
Query: 301 tggcagaatattatgggattttcttgggagcagagcaatgccaattaaataaccccttag 360
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 tggcagaatattatgggattttcttgggagcagagcaatgttaattaaataaccccttag 560
Query: 361 ggatgcatataatcccattggaatttcccgttggatgtaggatacatcacaaataaagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggatgcatataatcccattggaatttcccgttggatgtaggatacatcacaaataaagta 620
Query: 421 ttatagaattcatgggaagaacctaaaaatatcgtgacccttataatttataagtttgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatagaattcatgggaagaacctaaaaatatcgtgacccttataatttataagtttgct 680
Query: 481 ccatgctagacactattcatgtatcatcccatgtgtgtcacctcagtaacagtccttcat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccatgctagacactattcatgtatcatcccatgtgtgtcacctcagtaacagtccttcat 740
Query: 541 gtcagtgtcagcttgtacttgtgagagagaaggaaatgaaagtgaacagcccaggagctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtcagtgtcagcttgtacttgtgagagagaaggaaatgaaagtgaacagcccaggagctt 800
Query: 601 aagtatttgggtgactgactatgcgatagatcatatatgaaatctg 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aagtatttgggtgactgactatgcgatagatcatatatgaaatctg 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
