GACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTCTTTATATCATTTTTAATTTTTAATTTGTACCCCATTTT
TAATAGGGTTATTTGGTTCTCTGGAATCTACTTCTTGAGTTCTTTGTATA
TATTGGATATTGGCCCCCATCAGATGTAGGGTAGGTAAAGATCTTTTCCC
AATTTGTTAGTTGCTGTTTTGTCCTATTGACAGTGTCCTTTGCCTTATAG
AAGCCTTCCAATTTTATGAGGTCCCATTTGTCAATTCTTGATTTTAGAGC
ATAACCTATTGATGTTCTCTTAGGAAAATTTCCCCTGTGCCCATGTGCTC
AAGGCTCTTCTCCACTTTTTTTCCTAACAGTTTCAGTGTATTTGGTTTTA
TGTGGAGGTCTTTGATCCACTTGGACTTGAGCTTTGTACAAGGAGATAAG
AAAGCATCGATTTGCATTCTTCTACATGATAACCTCCAATTGAACCAGCA
CCATTTGTTGAAAATACTGCCTTTTTTCCCTCTGGATGGTTTTAGCTCCT
TTGTCTAAGATCAAGTGACCATAGGTATGTGGGTTCATTTCTGGGTCTTC
AATTCTATTCCATTGATCTTCCAGACTGTCACTGCACCAATACCATACAA
TTTTTATTACTATAACTTTGCAGTACAGCTTGAGATCCGAGATGCTGATT
CCCCCAGAAGTCCTTTTATTGTTGAGAATAGTTTTCGATATCCTGGGCTT
TTTGTTAT

TCCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGCCACGAACCTTCATTAATTT
TCAAATAGAAAACCTATGTGCAGAGAGTGGGTAGTTCCAAATATGGTTCA
TTTTTAACCTCCCCTCCCACACCCCCCCCCATGTTCATAAACCTGTGCTG
AGTGACTATTTGCCCAGGGTTACATGGATATACAGAACACATCAGTGAAA
AGTAAGACCACAAGTCCAGGCATCTGCCACAGCAGAGAGAAGTCAAGGAG
AATGCTAAGGTTCTTTAATTTCAACAAAAGTGGCTTTGCTTCTTCCTGCT
TTGCAAGATGTTCCATAGAAGATCTTTTGGTTATATTGTCATCTCTTTCC
TGTCTTTTCCTGTCTTTTCTGGTCTACTTCAGCTCTTTCTTATAACTCTT
TCTCTCCTTTTTTCCTTTGCTTTCTTTCTTTTTTCTTTTTTCTTTTTTTC
CTGAGATTTTAAAAAATCATATATTTTACTGTTTGGGATTAAAACGGTAA
CAAAGTAAAATGTTAAATACTAATAAATCATAGTCTCATAATCTAGAATC
ATTGACATTTAATATTTTTTCATTTTTTTCTTTGAGATTTTCACATTGAG
TACTATATATAATTTCAACCCTCCTTTTCTCCCCTACAACATCTCCCATG
TCCGCTTACTTCCTTTCAATTTATGAAGTCTTCTTTCATAATTTTTTATA
AGCATGC

Query= MSMg01no530_e03.g1 MSMg01no530_e03.g1 CHROMAT_FILE:
MSMg01no530_e03.g1 PHD_FILE: MSMg01no530_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:31 2005
         (680 letters)



>mm_chr12_68387776_68388856
          Length = 1081

 Score = 1309 bits (677), Expect = 0.0
 Identities = 680/681 (99%), Gaps = 1/681 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgccacgaaccttcattaattttcaaatagaaaacctatgtgcagagagtgggtagttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgccacgaaccttcattaattttcaaatagaaaacctatgtgcagagagtgggtagttc 260

                                                                       
Query: 61  caaatatggttcatttttaacctcccctcccacacccccccccatgttcataaacctgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaatatggttcatttttaacctcccctcccacacccccccccatgttcataaacctgtg 320

                                                                       
Query: 121 ctgagtgactatttgcccagggttacatggatatacagaacacatcagtgaaaagtaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgagtgactatttgcccagggttacatggatatacagaacacatcagtgaaaagtaaga 380

                                                                       
Query: 181 ccacaagtccaggcatctgccacagcagagagaagtcaaggagaatgctaaggttcttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccacaagtccaggcatctgccacagcagagagaagtcaaggagaatgctaaggttcttta 440

                                                                       
Query: 241 atttcaacaaaagtggctttgcttcttcctgctttgcaagatgttccatagaagatcttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttcaacaaaagtggctttgcttcttcctgctttgcaagatgttccatagaagatcttt 500

                                                                       
Query: 301 tggttatattgtcatctctttcctgtcttttcctgtcttttctggtctacttcagctctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggttatattgtcatctctttcctgtcttttcctgtcttttctggtctacttcagctctt 560

                                                                       
Query: 361 tcttataactctttctctccttttttcctttgctttctttcttttttcttttttcttttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttataactctttctctccttttttcctttgctttctttcttttttcttttttcttttt 620

                                                                       
Query: 421 ttcctgagattttaaaaaatcatatattttactgtttgggattaaaacggtaacaaagta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcctgagattttaaaaaatcatatattttactgtttgggattaaaacggtaacaaagta 680

                                                                       
Query: 481 aaatgttaaatactaataaatcatagtctcataatctagaatcattgacatttaatattt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatgttaaatactaataaatcatagtctcataatctagaatcattgacatttaatattt 740

                                                                       
Query: 541 tttcatttttttctttgagattttcacattgagtactatatataatttcaaccctccttt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttcatttttttctttgagattttcacattgagtactatatataatttcaaccctccttt 800

                                                                       
Query: 601 tctcccctacaacatctcccatgtccgcttacttcctttcaa-tttatgaagtcttcttt 659
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 801 tctcccctacaacatctcccatgtccgcttacttcctttcaaatttatgaagtcttcttt 860

                                
Query: 660 cataattttttataagcatgc 680
           |||||||||||||||||||||
Sbjct: 861 cataattttttataagcatgc 881


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1081
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1071
Effective search space:   717570
Effective search space used:   717570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)