Query= MSMg01no530_g20.b1 MSMg01no530_g20.b1 CHROMAT_FILE:
MSMg01no530_g20.b1 PHD_FILE: MSMg01no530_g20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:44 2005
(704 letters)
>mm_chr12_13994943_13996046
Length = 1104
Score = 1309 bits (677), Expect = 0.0
Identities = 695/701 (99%)
Strand = Plus / Plus
Query: 4 ggaattctataaatgtcttctactcaagaaaaatctagcaatgaaaagttatatagataa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctataaatgtcttctactcaagaaaaatctagcaatgaaaagttatatagataa 263
Query: 64 gtaagaaaagaatagcatacaagttaagaaaataaaaccttaagaaatctgtagctggag 123
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 264 gtaagaaaagaatagcatacaagttaagaaaataaaaccttaaaaaatctgtagctggag 323
Query: 124 ctcacccttcattgatcagacctgtgtcagatagagaatcttagttgcacagagattctg 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcacccttcattgaccagacctgtgtcagatagagaatcttagttgcacagagattctg 383
Query: 184 ggacttgtacttctttactctgaaccactgcgtccttaggtttgagtggaatttgatatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggacttgtacttctttactctgaaccactgcgtccttaggtttgagtggaatttgatatt 443
Query: 244 agaaaagcatcaaggaatacttttctgccctagctgaagttcttactttttcttttgctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agaaaagcatcaaggaatacttttctgccctagctgaagttcttactttttcttttgctc 503
Query: 304 attttttctctcattaaattattttatttatttatattccaaaagttgccccacttccca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attttttctctcattaaattattttatttatttatattccaaaagttgccccacttccca 563
Query: 364 gtctcccttccctgagttcttcaccccttcctccccacctctgagaaggtacttccccca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtctcccttccctgagttcttcaccccttcctccccacctctgagaaggtacttccccca 623
Query: 424 cccacccatccatccctacctcacccccaccagcatccctttccttggagcatcaagttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cccacccatccatccctacctcacccccaccagcatccctttccttggagcatcaagttt 683
Query: 484 ccacaggaataagaacatcctatctcactgaggccaacaaggcaatcctctgctgcatat 543
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 684 ccacaggaataagaacatcctctctcactgaggccgacaaggcaatcctctgctgcatat 743
Query: 544 gtgcccagggccactaaccagctccttggttttggcttagtctctaggaactctgaaagg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtgcccagggccactaaccagctccttggttttggcttagtctctaggaactctgaaagg 803
Query: 604 tcagggttacttgtcactgttgttctccctatagggttgcaatcccctcacctccttcag 663
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 804 tcagggttacttgtcactgttgttctccctatagggttgcaatccccttacctccttcat 863
Query: 664 tttttcttctaagtcttccatattagtctccaaatgcaatc 704
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tttttcttctaagtcttccatattagtctccaaatgcaatc 904
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space: 759236
Effective search space used: 759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no530_g20.g1 MSMg01no530_g20.g1 CHROMAT_FILE:
MSMg01no530_g20.g1 PHD_FILE: MSMg01no530_g20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:44 2005
(323 letters)
>mm_chr12_14172984_14173706
Length = 723
Score = 549 bits (284), Expect = e-161
Identities = 294/302 (97%), Gaps = 8/302 (2%)
Strand = Plus / Minus
Query: 1 aaagcactgacccagaaggtgaggcaatgagaagccttgaaggcaagctgtctcattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaagcactgacccagaaggtgaggcaatgagaagccttgaaggcaagctgtctcattttt 274
Query: 61 aactgccacctgtgtccaaaagtctcagatatatatagctgcatagtaactcacactcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aactgccacctgtgtccaaaagtctcagatatatatagctgcatagtaactcacactcca 214
Query: 121 gatgagctggtgtcatatgtacgtacatacatacatacatacatacatacatacatacat 180
||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 213 gatgagctggtgtcatatgtacg--------tacatacatacatacatacatacatacat 162
Query: 181 catacatatattcatatgtcttgagcagagaaagacaggcaggagagagaggcagaggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 catacatatattcatatgtcttgagcagagaaagacaggcaggagagagaggcagaggga 102
Query: 241 gagggagagggagggagagagagagagagtgagagagagagagagagagagagagagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gagggagagggagggagagagagagagagtgagagagagagagagagagagagagagaga 42
Query: 301 ga 302
||
Sbjct: 41 ga 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 20
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
