Query= MSMg01no530_h09.b1 MSMg01no530_h09.b1 CHROMAT_FILE:
MSMg01no530_h09.b1 PHD_FILE: MSMg01no530_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:47 2005
(667 letters)
>mm_chr12_48821823_48822889
Length = 1067
Score = 1259 bits (651), Expect = 0.0
Identities = 660/663 (99%)
Strand = Plus / Plus
Query: 5 gaattcagcacgtgtccatgtagagaataaattgtatggaaaaataagcataatttaagt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagcacgtggccatgtagagaataaattgtatggaaaaataagcataatttaagt 264
Query: 65 atttgtaaattttaagataattattcaaaagtaacatttcatcttcagaaatactttaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atttgtaaattttaagataattattcaaaagtaacatttcatcttcagaaatactttaaa 324
Query: 125 attaatcctgtactgatgcaattctacagtcacagaatcctcttatttcagtatattttc 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 attaatcctgtactgatgcaattctacagtcacagaatcctgttatttcagtatattttc 384
Query: 185 ttttctcctctgactttcaaatctaaccaccattttcacaatgcattataaggatgtgtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttctcctctgactttcaaatctaaccaccattttcacaatgcattataaggatgtgtc 444
Query: 245 ttggatgaaaccattttaattgatcaagctagtacttggggggaggtcctttgatgtgaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttggatgaaaccattttaattgatcaagctagtacttggggggaggtcctttgatgtgaa 504
Query: 305 gtcatttctgacttatatagagaatcttacataatatcaccttgtgagtttttctttctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtcatttctgacttatatagagaatcttacataatatcaccttgtgagtttttctttctt 564
Query: 365 cattattttgatattatacaaatctcacaggaagatatttaaacctgtgattctttcctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cattattttgatattatacaaatctcacaggaagatatttaaacctgtgattctttcctc 624
Query: 425 cacaatgcatattcccaagttttagatttaccaaaactctattctctataatttctacat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cacaatgcatattcccaagttttagatttaccaaaactctattctctataatttctacat 684
Query: 485 tgttctctttcttgttgacagaaagaacacatgatagtgacataaaaaagaagaaaaatt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 685 tgttctctttcttgttgacagaaagaacacatgatagtgacataaaaaagaagaacaatt 744
Query: 545 tactggggctcacagttcagtaagtaatgttcacaattatggaaactcttggcagagatg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tactggggctcacagttcagtaagtaatgttcacaattatggaaactcttggcagagatg 804
Query: 605 tagctccaggcagtgacagcgagatttagagtggataattaacttatctgtgccaggtaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tagctccaggcagtgacagcgagatttagagtggataattaacttatctgtgccaggtaa 864
Query: 665 cag 667
|||
Sbjct: 865 cag 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_h09.g1 MSMg01no530_h09.g1 CHROMAT_FILE:
MSMg01no530_h09.g1 PHD_FILE: MSMg01no530_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:47 2005
(705 letters)
>mm_chr12_48950821_48951925
Length = 1105
Score = 1323 bits (684), Expect = 0.0
Identities = 687/688 (99%)
Strand = Plus / Minus
Query: 1 taatcaaagtagcttgaagttctctaaaaatatatctaaatacacttagaaaaataaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 taatcaaagtagcttgaagttctctaaaaatatatctaaatacacttagaaaaataaatg 800
Query: 61 ttcttgcataagtgaggctcttatttaaaagaattggaaataatttatcatcctttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttcttgcataagtgaggctcttatttaaaagaattggaaataatttatcatcctttcatt 740
Query: 121 agaaggcatttaaatgttctcaaaactgataattttgaatctaggattatttgtatatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agaaggcatttaaatgttctcaaaactgataattttgaatctaggattatttgtatatag 680
Query: 181 caatatacagactcattcatgaaataataaaaataattgccccagccattgaaattttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 caatatacagactcattcatgaaataataaaaataattgccccagccattgaaattttga 620
Query: 241 agcatttagcacttaaagatcagaggaaaataattgcttatatgattcaaattcagaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agcatttagcacttaaagatcagaggaaaataattgcttatatgattcaaattcagaaat 560
Query: 301 taataagcataatattgggcaatattttcttctttatgcaaaaattgctcctacaagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 taataagcataatattgggcaatattttcttctttatgcaaaaattgctcctacaagtgg 500
Query: 361 taagagtgaaaggtaaacatgaacaatcagatgaaataaataaaatggcagtgataatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 taagagtgaaaggtaaacatgaacaatcagatgaaataaataaaatggcagtgataatct 440
Query: 421 atgatactgatatgagaaatttattttgcaaagtacagaattttaagtaccagtgttacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atgatactgatatgagaaatttattttgcaaagtacagaattttaagtaccagtgttacg 380
Query: 481 aagtatacaataaaatagaataaaaaattggaccagatatcaggttgcatctggaatagc 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 379 aagtatacaataaaatagaataaaaaataggaccagatatcaggttgcatctggaatagc 320
Query: 541 tgtttctgtataggtctttctgtattttttctcatggagaggtgaaagaaagatcataga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgtttctgtataggtctttctgtattttttctcatggagaggtgaaagaaagatcataga 260
Query: 601 attaagtgactggggagatgaagattgtctgggaaaagtttggagagtgtaaatctggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 attaagtgactggggagatgaagattgtctgggaaaagtttggagagtgtaaatctggaa 200
Query: 661 tatatatatatatatatatatatatata 688
||||||||||||||||||||||||||||
Sbjct: 199 tatatatatatatatatatatatatata 172
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 147 atatatatatatatatatatatatatata 175
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 149 atatatatatatatatatatatatatata 177
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 151 atatatatatatatatatatatatatata 179
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 153 atatatatatatatatatatatatatata 181
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 155 atatatatatatatatatatatatatata 183
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 157 atatatatatatatatatatatatatata 185
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 159 atatatatatatatatatatatatatata 187
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 161 atatatatatatatatatatatatatata 189
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 163 atatatatatatatatatatatatatata 191
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 165 atatatatatatatatatatatatatata 193
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 167 atatatatatatatatatatatatatata 195
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 169 atatatatatatatatatatatatatata 197
Score = 56.8 bits (29), Expect = 6e-12
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatata 688
|||||||||||||||||||||||||||||
Sbjct: 171 atatatatatatatatatatatatatata 199
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 661 tatatatatatatatatatatatatata 688
||||||||||||||||||||||||||||
Sbjct: 146 tatatatatatatatatatatatatata 173
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 660 atatatatatatatatatatatatatat 687
||||||||||||||||||||||||||||
Sbjct: 173 atatatatatatatatatatatatatat 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 103
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 16
Length of query: 705
Length of database: 1105
Length adjustment: 10
Effective length of query: 695
Effective length of database: 1095
Effective search space: 761025
Effective search space used: 761025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
