Query= MSMg01no530_n09.b1 MSMg01no530_n09.b1 CHROMAT_FILE:
MSMg01no530_n09.b1 PHD_FILE: MSMg01no530_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:17 2005
(723 letters)
>mm_chr12_75770882_75772005
Length = 1124
Score = 1210 bits (626), Expect = 0.0
Identities = 663/677 (97%), Gaps = 6/677 (0%)
Strand = Plus / Minus
Query: 52 catatgcctgtaattttaacactggggaggcgggtataggtggacccctgatgctcagta 111
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 1124 catatgcctgtaattttaacactggagaggtgggtataggtggacccctgatgctcagta 1065
Query: 112 atgagtcagactagcctacctgacagataccaagacagtaagagaatctg---aaaaaat 168
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1064 atgaggcagactagcctacctgacagataccaagacagtaagagaatctgaaaaaaaaat 1005
Query: 169 gggga-taggaaggaagtattgtcagtgcttgaggcattacaccatggctttcctctgtc 227
|||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 1004 -gggagtaggaaggcagtattgtcagtacttgaggcattacaccatgggtttcctctgtc 946
Query: 228 ctccatatgtatgagcatacaggtgcagctggatacatgcatggatctgtactcaagaac 287
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 945 ctccatatgtatgagcatacaggtgcagctggatacatgcatggatctatactcaagaac 886
Query: 288 acatctggcttctttgtatatgaaaacatgtatatgtgaatctgtacacgaaagaaaaca 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 acatctggcttctttgtatatgaaaacatgtatatgtgaatctgtacacgaaagaaaaca 826
Query: 348 cacagatttatcatattctgtataggttggtacttcacagactatcattatatgaaggat 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cacagatttatcatattctgtataggttggtacttcacagactatcattatatgaaggat 766
Query: 408 aacaactgtgaaagacctcacatagccttatacatacctgaataacttttttcagcatgt 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 aacaactgtgaaagacctcacatagccttatacatacctgaataacttttttcagcatgt 706
Query: 468 tgataaacaacttaacatgtaattttccttctttttaagcaaagcttagttcaggtatat 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tgataaacaacttaacatgtaattttccttctttttaagcaaagcttagttcaggtatat 646
Query: 528 gcttgtctagcctttttgctttggaacatatgggaagttttaattttagtttttatgttg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gcttgtctagcctttttgctttggaacatatgggaagttttaattttagtttttatgttg 586
Query: 588 ttctaaatttaccaaattatactttttaatataatacatgttaagatatgaatcaaagtt 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ttctaaatttaccaaattatactttttaatataatacatgttaagatatgaatcaaagtt 526
Query: 648 a-ttttgtgattaagcttttgccatattttataatattcttctcttgctcnaaagaatat 706
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 525 atttttgtgattaagcttttgccatattttataatattcttctcttgctcaaaagaatat 466
Query: 707 cttctgtttgcttgaca 723
|||||||||||||||||
Sbjct: 465 cttctgtttgcttgaca 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 723
Length of database: 1124
Length adjustment: 10
Effective length of query: 713
Effective length of database: 1114
Effective search space: 794282
Effective search space used: 794282
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no530_n09.g1 MSMg01no530_n09.g1 CHROMAT_FILE:
MSMg01no530_n09.g1 PHD_FILE: MSMg01no530_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:17 2005
(650 letters)
>mm_chr12_75620172_75621220
Length = 1049
Score = 1205 bits (623), Expect = 0.0
Identities = 644/651 (98%), Gaps = 3/651 (0%)
Strand = Plus / Plus
Query: 1 ttctctctatctgtattagctactttatttgaagggtttcatgctgctgtcaaacaattc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcgctatctgtattagctactttatttgaagggtttcatgctgctgtcaaacaattc 260
Query: 61 caagtattcatcacttctgtatgtatttgaagggtcagttatagtccaagaacattgtaa 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 261 caagtattcatcacttctgtatgtatttgaaggatcagttatagtccaagaaccttgtaa 320
Query: 121 gaaagcaatatttgttagttccatgaagcatcaggaaaataactggttgtttatagcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaagcaatatttgttagttccatgaagcatcaggaaaataactggttgtttatagcatg 380
Query: 181 acatcagacctgaagtttgttattggttgctacatgttggagatgttagtagtctctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatcagacctgaagtttgttattggttgctacatgttggagatgttagtagtctctctt 440
Query: 241 atgtggtaagctttggcatattgtattatgaaagttattcccaatagatttacctcgagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtggtaagctttggcatattgtattatgaaagttattcccaatagatttacctcgagt 500
Query: 301 ttgactaatagattataataccaggttacttcttagagacacgggtggaaatgcttttag 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgactaatagattataataccaagttacttcttagagacacgggtggaaatgcttttag 560
Query: 361 ttttccatttaggtacacatggattattctactgggataaccttcattttctgataatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttccatttaggtacacatggattattctactgggataaccttcattttctgataatac 620
Query: 421 cattattataacactatacaattttatttggtgcaaacagaattattataatttgtgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cattattataacactatacaattttatttggtgcaaacagaattattataatttgtgtct 680
Query: 481 catgatgaatgatatactcaacagtctatttggaataacttgataatggcataagaatga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgatgaatgatatactcaacagtctatttggaataacttgataatggcataagaatga 740
Query: 541 atatgttttaactctgcatttataataagtaagaaagaagaaaaggg-ttattgtgttat 599
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 741 atatgttttaactctgcatttataataagtaagaaagaa-aaaaggggttattgtgttat 799
Query: 600 acagtaaccatagcaggataaataagaatgagtctaagggaaaaatgagag 650
|||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 800 acagtaaccatagcaggataaataagaatgagtctaagggaaaa-tgagag 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1049
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1039
Effective search space: 664960
Effective search space used: 664960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
