CCTAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTATCAGAGAGGA
TCCGCGGAATTCCAGGCCATTCTGGCCTTCAGAGTAAGACGTGTCCAGAT
AGGAGGGAGGGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCACATTGAGTTTA
TTGCAACTTTAAATCTCAATATAAAAATATTTGTGTTGAGCTAAATCTTG
CCATAACTGTATACTCTTGTAAGAAAAGGCAAGGTGAGTCTACTGAGAAG
GTAGATGAAAAAGATGTCATTTATTGCTTAATTTTTTTCTTATCTGCCTT
TTAGATAAGTAGAAAGACTGGCAGAATGGACCTCAAAGTATCCAAAGAGC
ATCAGTTTATATTTTAGATCATGTGTCCCCCCCACATGATGGCTGTAGTA
TGCTTGGTTATCATTGACTGATCATTAATTTGACTGGATCTGGATCCTCT
TTGGAGTCTTGATTTCTTGGTTCCCTGTGTTATATCCTGTTATATGGTTC
GTGTTCGTGCTTGTCTATTTGATTGCTCGTCGGTTCGTCTTTTTTTTTCA
TGCCCTTTTTGTTTTTTTACCGAGCTTCGTTTTCTCTCTGTTTGCGAGTT
TTTTTTCACATTTCACTGATGGAGCGGTTGTTCCTTGTTTTCTTTCGCCG
CGCCGTCCTCTTTGCTTCTGTACTTCCATGTTTAAGTGGTGCTTCATTTT
TTCCGTTTACCGTTTTGTTCCGTTCCTAT

CCCCTGTCACCATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGTCCCCTCCCCCA
AGCTAATGATTACAGTAAGTAGGCTCTGATCTATTACAGTAACTGGAAGG
TACAGGGATCTGTGGGAGATGCTCTAGATAACTTTATGTTCAAACATGAT
GACAACTGTGTAACTGAGTTATATGTTATCTTTATTATTGATTTGTAAGA
TTTTGTATATTTTAGATACAAGTTTCTAGTCAAATAAAGGAATTACAAAT
ATTTTTTTCTATTCTGTATTTTATTGTGTGTATTTTTTTTTGCTCTCATC
AATGTACTATGTCAGAAACACAGATGAACATTTCATGTCTTTCTATAATG
TTAGAGCTTATTGAAAATAAATTCAGGAGGTTGCACCTTGTAGCTGAGCA
AGTTTGAATGTTTCTGTGTGAAGTTCTCTGAGCCCTGCTGCTGGATGCTG
AGAGGCGCGCTCAGGGAAGCCCCTAAGTTGGGACATGAAATAATATTCCA
AACCGCAAAAAGGAGACAACCCTGACTTACAATCAGCAACTGTGTCCATC
CCTACATCAGAGAGCAGGCCTGCAAACAGCTTCTGAAGAGAATGCACTGA
CACGTGATGATGTACTGGTGAGCTTTGCTTANGAAGAGTGGGCTTTGCTG
GATTTTTCCCAGAAGAGTCTCTACAAAGATGTGATGCTGGAGACCTACAG
GAACCTC

Query= MSMg01no530_p07.g1 MSMg01no530_p07.g1 CHROMAT_FILE:
MSMg01no530_p07.g1 PHD_FILE: MSMg01no530_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:27 2005
         (596 letters)



>mm_chr12_41700323_41701319
          Length = 997

 Score = 1015 bits (525), Expect = 0.0
 Identities = 555/565 (98%), Gaps = 2/565 (0%)
 Strand = Plus / Minus

                                                                       
Query: 33  aagtaggctctgatctattacagtaactggaaggtacagggatctgtgggagatgctcta 92
           |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 997 aagtaggctcagatctattacagtaacttgaaggtgcagggatctgtgggagatgctcta 938

                                                                       
Query: 93  gataactttatgttcaaacatgatgacaactgtgtaactgagttatatgttatctttatt 152
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 gataactttatgttcaaacttgatgacaactgtgtaactgagttatatgttatctttatt 878

                                                                       
Query: 153 attgatttgtaagattttgtatattttagatacaagtttctagtcaaataaaggaattac 212
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 877 attgatttgtaagattttgtatattttagatacaagtttctagtcaaatataggaattac 818

                                                                       
Query: 213 aaatatttttttctattctgtattttattgtgtgta-tttttttttgctctcatcaatgt 271
           ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 817 aaata-ttttttctattctgtattttattgtgtgtattttttttttgctctcatcaatgt 759

                                                                       
Query: 272 actatgtcagaaacacagatgaacatttcatgtctttctataatgttagagcttattgaa 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 actatgtcagaaacacagatgaacatttcatgtctttctataatgttagagcttattgaa 699

                                                                       
Query: 332 aataaattcaggaggttgcaccttgtagctgagcaagtttgaatgtttctgtgtgaagtt 391
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 aataaattcacaaggttgcaccttgtagctgagcaagtttgaatgtttctgtgtgaagtt 639

                                                                       
Query: 392 ctctgagccctgctgctggatgctgagaggcgcgctcagggaagcccctaagttgggaca 451
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ctctgagccctgctgctggatgctgagaggcgcgctcagggaagcccctaagttgggaca 579

                                                                       
Query: 452 tgaaataatattccaaaccgcaaaaaggagacaaccctgacttacaatcagcaactgtgt 511
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 578 tgaaataatattccaaaccgcaaaaaggagacaaccctgacttacaatcagcaactgtgc 519

                                                                       
Query: 512 ccatccctacatcagagagcaggcctgcaaacagcttctgaagagaatgcactgacacgt 571
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ccatccctacatcagagagcaggcctgcaaacagcttctgaagagaatgcactgacacgt 459

                                    
Query: 572 gatgatgtactggtgagctttgctt 596
           |||||||||||||||||||||||||
Sbjct: 458 gatgatgtactggtgagctttgctt 434


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 997
Length adjustment: 10
Effective length of query: 586
Effective length of database: 987
Effective search space:   578382
Effective search space used:   578382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)