Query= MSMg01no531_e03.b1 MSMg01no531_e03.b1 CHROMAT_FILE:
MSMg01no531_e03.b1 PHD_FILE: MSMg01no531_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:50 2005
(379 letters)
>mm_chr12_72786929_72787711
Length = 783
Score = 335 bits (173), Expect = 4e-96
Identities = 209/223 (93%), Gaps = 6/223 (2%)
Strand = Plus / Minus
Query: 161 aatcatttctttaaaaatgtacttgtattttgtgtatctgtgtgtgttccaccacagttc 220
|||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 582 aatcatttcttttaaaatgtacttgtattttatgtatttgtgtgtgttccaccacagttc 523
Query: 221 ccacatagatctctcttgtctttacctctgtgtacagcacac----acctatgtctcctg 276
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 522 ccacatagatctctcttgtctttacctctgtgtagagcacacacctacctatgtctcctg 463
Query: 277 gagaaagataatgctatctgagacagatatagtctttt-aaaaatgatttccagcaccaa 335
||| || ||||||||||||| |||||||||||| |||| |||||||||||||||||||||
Sbjct: 462 gaggaatataatgctatctgggacagatatagt-ttttaaaaaatgatttccagcaccaa 404
Query: 336 ctaacaattactgggcatgctgagtgacaaaaatcatctagtc 378
|||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 403 ctaacaattactgggcatgctgagtgacaaaaataatctagtc 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 783
Length adjustment: 9
Effective length of query: 370
Effective length of database: 774
Effective search space: 286380
Effective search space used: 286380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_e03.g1 MSMg01no531_e03.g1 CHROMAT_FILE:
MSMg01no531_e03.g1 PHD_FILE: MSMg01no531_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:50 2005
(338 letters)
>mm_chr12_72618130_72618868
Length = 739
Score = 524 bits (271), Expect = e-153
Identities = 323/345 (93%), Gaps = 11/345 (3%)
Strand = Plus / Plus
Query: 1 tgtttttctccatttgggtttttcaattctctgaaatgactcctgtttgtgcc-aaaagc 59
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tgtttttctccatttgggtttttcaattctctgaaatgactcctgtttgtgccaaaaagc 260
Query: 60 ctagctagcaagcgtcacagaggtttggtagtgcagacctggagagttttggacagcaaa 119
|| |||||||||| || |||||||||| |||| | |||||||||||||||||| ||||||
Sbjct: 261 ctggctagcaagcatcccagaggtttgttagtacggacctggagagttttggatagcaaa 320
Query: 120 cccagtgtcatgtatctatctgcactgtttataattacatgtgacctccttgaagccatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccagtgtcatgtatctatctgcactgtttataattacatgtgacctccttgaagccatg 380
Query: 180 tcagattattagtcatttaaagatgggtaaactgaggcatagagaaacaagtatttttta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagattattagtcatttaaagatgggtaaactgaggcatagagaaacaagtatttttta 440
Query: 240 aggct----acttaattagtagacctgctagcttttt--aaaaaaaaaattgctactctt 293
||||| |||||| ||||||||||| |||||||| |||||| |||||||||||
Sbjct: 441 aggctgcttacttaagtagtagacctggaagctttttttaaaaaa----ttgctactctt 496
Query: 294 tttactctttacttttgtgctctctctctctctctctctctctct 338
||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 497 tttactctttacttttgtgttctctctctctctctctctctctct 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 739
Length adjustment: 9
Effective length of query: 329
Effective length of database: 730
Effective search space: 240170
Effective search space used: 240170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
