GTNNTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTAT
TTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATT
AGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGG
TGGTCTTTTTGTCCTATTGACGTGTCTTTTGCCTTGCAGAAACTTTGGAG
TTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAGCAAGCCATTG
CTGTTCTGTTCAGGAATCTTTCCCCTGTACCCATATCTTCAAGGCTTTTC
CCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTC
CTTGATCCACTCAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGA
TTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTG
AAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGAT
CAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCC
ATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACA
ATTGTCCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGT
TCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTAG

NTTTGCTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATATTTCCGAGCCAAC
TTGAACTGAACAATTACTTAAATATACACTGAATTTTGTATCAAGACTTA
ACTTGTCTCTATGAAAAAAGTATTGGGAATAAATAAGGATCCTGTTTAGA
GAAGGATTAGAGGTAGACACAGCACATCTTTATAGACAAATATTGAAGCT
ATATAAGGTCATTTCATCATTTAAAGTGATGTGTACACTTATTCAATTAA
ATATAGCCATCAATATTGTATTCTATTACAAAAATTATTTGACAAAAAGA
AATATTTAACTCTGGTCAATCAAACACACACACACACACACACACAAGCA
CACACACACAAACCCAATTATATAACATCATGAGGTTTTTTTAAATGACT
TAAAGTGACTGTATCTACTAGGCAGTGTAGTGTTTCTCTATGATACCTTT
GTTATTTTGAAATAAAAAAAAACTACTTGTATAAATAGTAGAGTTTTAAC
TCATTTTTGGCTACACTGCTGCAAATAAAGACAGATCTGTATTTAGCCAA
TTAACCTAGTGGTTCCCTAATGGTTTTTGGAACAAAATTGTGAACATAGA
AACTTCTTTTTTAGTCTAGCTCATTCGAATATAGAACGGTGCATTTTCTT
CTCTACCCATGGCCTATAATTTGTTATCACTATCTTATTATAATA

Query= MSMg01no532_a18.g1 MSMg01no532_a18.g1 CHROMAT_FILE:
MSMg01no532_a18.g1 PHD_FILE: MSMg01no532_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:52 2005
         (662 letters)



>mm_chr12_63606805_63607867
          Length = 1063

 Score =  977 bits (505), Expect = 0.0
 Identities = 530/539 (98%), Gaps = 5/539 (0%)
 Strand = Plus / Minus

                                                                        
Query: 126  agaggtagacacagcacatctttatagacaaatattgaagctatataaggtcatttcatc 185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 agaggtagacacagcacatctttatagacaaatattgaagctatataaggtcatttcatc 1004

                                                                        
Query: 186  atttaaagtgatgtgtacacttattcaattaaatatagccatcaatattgtattctatta 245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 atttaaagtgatgtgtacacttattcaattaaatatagccatcaatattgtattctatta 944

                                                                        
Query: 246  caaaaattatttgacaaaaagaaatatttaactctggtcaatcaaacacacacacacaca 305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  caaaaattatttgacaaaaagaaatatttaactctggtcaatcaaacacacacacacaca 884

                                                                        
Query: 306  cacaca-caagcacacacacacaaacccaattatataacatcatgaggtttttttaaatg 364
            |||| | ||  |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 883  caca-agca--cacacacacacaaacccaattatataacatcatgaggttttttttaatg 827

                                                                        
Query: 365  acttaaagtgactgtatctactaggcagtgtagtgtttctctatgatacctttgttattt 424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826  acttaaagtgactgtatctactaggcagtgtagtgtttctctatgatacctttgttattt 767

                                                                        
Query: 425  tgaaataaaaaaaa-actacttgtataaatagtagagttttaactcatttttggctacac 483
            ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766  tgaaataaaaaaaaccctacttgtataaatagtagagttttaactcatttttggctacac 707

                                                                        
Query: 484  tgctgcaaataaagacagatctgtatttagccaattaacctagtggttccctaatggttt 543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706  tgctgcaaataaagacagatctgtatttagccaattaacctagtggttccctaatggttt 647

                                                                        
Query: 544  ttggaacaaaattgtgaacatagaaacttcttttttagtctagctcattcgaatatagaa 603
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 646  ttggaacaaaattgtgaacatagaaacttcttttttagtctagctcattcaaatatagaa 587

                                                                       
Query: 604  cggtgcattttcttctctacccatggcctataatttgttatcactatcttattataata 662
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586  cagtgcattttcttctctacccatggcctataatttgttatcactatcttattataata 528


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space:   686556
Effective search space used:   686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)