Query= MSMg01no532_c23.b1 MSMg01no532_c23.b1 CHROMAT_FILE:
MSMg01no532_c23.b1 PHD_FILE: MSMg01no532_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:02 2005
(607 letters)
>mm_chr12_111096477_111097484
Length = 1008
Score = 571 bits (295), Expect = e-167
Identities = 325/337 (96%), Gaps = 7/337 (2%)
Strand = Plus / Minus
Query: 8 gaattcagta---aagaattatcctgatgaaaaaccgggctgagatgatgcagggagcga 64
|||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 334 gaattcagtaaagaagaa--atactgatgaaaaaccgggctgagatgatgcagggagcga 277
Query: 65 cggtttcagtacttggaatcaggagctcagctgaaagcatcattaacagacccaggcttg 124
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||
Sbjct: 276 cggtttcagtacttggaatcaggagctcagctgaaagcatcactaacagacctaggcatg 217
Query: 125 tggtggcttgaatatcaggggg-tgaggtagaaggaagggatctatccagccaaggacaa 183
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 216 tggtggcttgaatatcaggggggtgaggtagaaggaaggaatctatccagccaaggacaa 157
Query: 184 aggtaagttttaaatgatatgggaatggaaaaatagagtctttgcgacacattaaaaaaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aggtaagttttaaatgatatgggaatggaaaaatagagtctttgcgacacattaaaaaa- 98
Query: 244 caaaacaaaacaaaatctctaagttatgggtatagaaggccgattcctaggccaaagacg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 caaaacaaaacaaaatctctaagttatgggtatagaaggccgattcctaggccaaagacg 38
Query: 304 tagaaaatattttcattaaattgtaaaagaaaaattt 340
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 tagaaaatattttcattaaattgtaaaagaaaaattt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1008
Length adjustment: 10
Effective length of query: 597
Effective length of database: 998
Effective search space: 595806
Effective search space used: 595806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_c23.g1 MSMg01no532_c23.g1 CHROMAT_FILE:
MSMg01no532_c23.g1 PHD_FILE: MSMg01no532_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:03 2005
(571 letters)
>mm_chr12_110935628_110936599
Length = 972
Score = 1067 bits (552), Expect = 0.0
Identities = 567/572 (99%), Gaps = 1/572 (0%)
Strand = Plus / Plus
Query: 1 actgagcagtgtttgggcatggatggttatggagttctggcccaggctgggtggggttta 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgagcagtgtttgggcatggctggttatggagttctggcccaggctgggtggggttta 260
Query: 61 ggttgagaccaatgtgaactgtgcccccacagcctcactattccacaggtgggaatcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttgagaccaatgtgaactgtgcccccacagcctcactattccacaggtgggaatcatt 320
Query: 121 aggagatctggcggtcttttctctgctcaccaggaaggtgccctcgtgtgttcttggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagatctggcggtcttttctctgctcaccaggaaggtgccctcgtgtgttcttggaga 380
Query: 181 tgcactagagctcatctctaagatagaaattggttttgttttgttgttctgtgaaagtct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcactagagctcatctctaagatagaaattggttttgttttgttgttctgtgaaagtct 440
Query: 241 gtgctgtggtgagcctgccccatgttgcatgggtatgctctgcctggcagattactggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgctgtggtgagcctgccccatgttgcatgggtatgctctgcctggcagattactggaa 500
Query: 301 gcagacctaagttccctgtttccc-agatagatggggtgcttgccagtgtgtgctcatgt 359
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagacctaagttccctgtttccccagatagatggggtgcttgccagtgtgtgctcatgt 560
Query: 360 aagaagtctctacctccagacagaggggaacaggcccagctccctctacctgcctcccaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaagtctctacctccagacagaggggaacaggcccagctccctctacctgcctcccaa 620
Query: 420 gtgtttctttgaccttaataaagggcacatttctttcttctgtccatgtgacatgatttg 479
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 gtgtttctttgaccttaataaagggcacatttctttcttctgtccacgtgacatgatttg 680
Query: 480 agacttgcgattgcctagcctgccctcagttttcccatatgtaaaagggtcaccatggtg 539
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agacttgcaattgcctagcctgccctcagttttcccatatgtaaaagggtcaccatggtg 740
Query: 540 acatgagttttccatcttcattttagtgttag 571
||||||||||||||||||||||||||||||||
Sbjct: 741 acatgagttttccatcttcattttagtgttag 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 972
Length adjustment: 10
Effective length of query: 561
Effective length of database: 962
Effective search space: 539682
Effective search space used: 539682
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
