NCCACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTTGATATAATAATTGCAAAATTTATGTTAAGTATGTTCAC
TCTCCTTAATAACTGAAAATAAGAAATAATTATGTATGGAATTTCATAGT
TAGAGAATAATACGGAAAAATATAGGTAGCAGATATCTATATCTGGTATA
GATATTCAGAGAGAGGGCTGTGAACATGGCCTAAAGGGTAGGAACCTTTA
CTGTTGAGTGCATGGGAAATTGAATTCCAACTTTGGCATTCATATAAAAG
TCAGGCATTGTCACACAGTACTCATAGAAACTTAGCATTGTGAGGGGCGG
AGACATTGTTTTGTTTTCTGAAAAAGTGCCCTGGTTTCCAATTAAATCAT
TCTTGTACCGAAGGGACAGAATACTAAACAAACTATTACATTTCTATCTC
TGCAGAAAATTTTTATCATCAGATGATGGTACAGTCAAACTCCACAAAGA
TACCTGCTTTCAAATACAGGCATGCCTTTTTGTCCTCTAGCATCCTGTAA
CGGGAAAAGAAGCTTGTCCTGGAGCATGTACCAGAGTGGGGAAAGGTGTC
CTATCCAGTCCATTANACTACAAAGTCACATGATATAGCCATATCCACGG
AAATCTGTTCCTAATCACTGTAGGAGAGCTGTCAGATTTAATGGGAATAA
GATTTCAGTCCCAGCAGGGGGATGGCAACAAGGCTAACAAATCTAAGAGC
CCCCAN

TCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGATACATTAATGTTGTTGGT
ATTTGACAGAAGGAAAACCAACTAAAAATTAAATGAAACAGTCTAAACAC
TATCGATTTTTAAAATTATTTTTTGAATATTAACAACTAAATATTTTGAA
GCAAATTACTTTAAGATAAAATAGAATTAGTTAGACAATATAATAGCATA
GTATGAAAAACCTCTATATCTAATATTATCAAATATAATAATAAAACACA
TAGAATCAAGCTTCTACTGTCTTTTGCTTTTCTAAAGATATTAAAACATG
TGAATTTATCAATTATAGCAAGTAAACCACAAAGAAAACCCACAAAAATG
CTTGGAGTTCCATAAAAGTTAATATAACAATTAGTGTTGAATCGTGATCT
ATTTTCAAGTACAGGTGGGTTATCATAAACATTATTGTAGTTTAGTAAAA
TATATTATTAATAGTCTCTGTACTAAAGTCAGAACTAAGAGAAACACTCA
AATTGACCATTTCCTAGATACACTAGTTAGTAAAGGCAGTTACTATCACC
TTGGCTCAGTTCTACAAATGATAATCAAGACAGTATTTAAAAGCTCAACA
TGCATTATGTCTTAAATTTGTGATGACCAAAACCCATAAAATATCTGAGA
GTTAACTCCATTAATTTGTAATTAGGAAATACATACAAACATTTTCAACA
CTAAGGAAGA

Query= MSMg01no532_n01.b1 MSMg01no532_n01.b1 CHROMAT_FILE:
MSMg01no532_n01.b1 PHD_FILE: MSMg01no532_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:50 2005
         (692 letters)



>mm_chr12_63024234_63025325
          Length = 1092

 Score = 1294 bits (669), Expect = 0.0
 Identities = 683/688 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccttgatataataattgcaaaatttatgttaagtatgttcactctccttaataac 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gaattccttgatataataattgcaaaatttatgttaagtatgttcactctccttaataac 833

                                                                       
Query: 65  tgaaaataagaaataattatgtatggaatttcatagttagagaataatacggaaaaatat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 832 tgaaaataagaaataattatgtatggaatttcatagttagagaataatatggaaaaatat 773

                                                                       
Query: 125 aggtagcagatatctatatctggtatagatattcagagagagggctgtgaacatggccta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aggtagcagatatctatatctggtatagatattcagagagagggctgtgaacatggccta 713

                                                                       
Query: 185 aagggtaggaacctttactgttgagtgcatgggaaattgaattccaactttggcattcat 244
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aagggtaggagcctttactgttgagtgcatgggaaattgaattccaactttggcattcat 653

                                                                       
Query: 245 ataaaagtcaggcattgtcacacagtactcatagaaacttagcattgtgaggggcggaga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ataaaagtcaggcattgtcacacagtactcatagaaacttagcattgtgaggggcggaga 593

                                                                       
Query: 305 cattgttttgttttctgaaaaagtgccctggtttccaattaaatcattcttgtaccgaag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 cattgttttgttttctgaaaaagtgccctggtttccaattaaatcattcttgtaccgaag 533

                                                                       
Query: 365 ggacagaatactaaacaaactattacatttctatctctgcagaaaatttttatcatcaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ggacagaatactaaacaaactattacatttctatctctgcagaaaatttttatcatcaga 473

                                                                       
Query: 425 tgatggtacagtcaaactccacaaagatacctgctttcaaatacaggcatgcctttttgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tgatggtacagtcaaactccacaaagatacctgctttcaaatacaggcatgcctttttgt 413

                                                                       
Query: 485 cctctagcatcctgtaacgggaaaagaagcttgtcctggagcatgtaccagagtggggaa 544
           |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 412 cctctagcatcctgtaactggaaaagaagcttgtcctggagcatgtagcagagtggggaa 353

                                                                       
Query: 545 aggtgtcctatccagtccattanactacaaagtcacatgatatagccatatccacggaaa 604
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 352 aggtgtcctatccagtccattaaactacaaagtcacatgatatagccatatccacggaaa 293

                                                                       
Query: 605 tctgttcctaatcactgtaggagagctgtcagatttaatgggaataagatttcagtccca 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tctgttcctaatcactgtaggagagctgtcagatttaatgggaataagatttcagtccca 233

                                       
Query: 665 gcagggggatggcaacaaggctaacaaa 692
           ||||||||||||||||||||||||||||
Sbjct: 232 gcagggggatggcaacaaggctaacaaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space:   737924
Effective search space used:   737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no532_n01.g1 MSMg01no532_n01.g1 CHROMAT_FILE:
MSMg01no532_n01.g1 PHD_FILE: MSMg01no532_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:51 2005
         (677 letters)



>mm_chr12_62981466_62982542
          Length = 1077

 Score =  803 bits (415), Expect = 0.0
 Identities = 433/439 (98%)
 Strand = Plus / Plus

                                                                       
Query: 239 tgtcttttgcttttctaaagatattaaaacatgtgaatttatcaattatagcaagtaaac 298
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 439 tgtcttttgcttttctaaagatattaaaacatgtgaatttctcaattatagcaagtaaac 498

                                                                       
Query: 299 cacaaagaaaacccacaaaaatgcttggagttccataaaagttaatataacaattagtgt 358
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 499 cacaaagaaaacccacaaaaatgcttggagttccacaaaagttaatataacaattagtgt 558

                                                                       
Query: 359 tgaatcgtgatctattttcaagtacaggtgggttatcataaacattattgtagtttagta 418
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 559 tgaatcgtgatctattttcaagtacaggtgggttatcataaacactattgtagtttagtt 618

                                                                       
Query: 419 aaatatattattaatagtctctgtactaaagtcagaactaagagaaacactcaaattgac 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaatatattattaatagtctctgtactaaagtcagaactaagagaaacactcaaattgac 678

                                                                       
Query: 479 catttcctagatacactagttagtaaaggcagttactatcaccttggctcagttctacaa 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 catttcctagatacactagttagtaaaggcagttactatcaccttggctcagttctacaa 738

                                                                       
Query: 539 atgataatcaagacagtatttaaaagctcaacatgcattatgtcttaaatttgtgatgac 598
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atgataatcaagacagtatttcaaagctcaacatgcattatgtcttaaatttgtgatgac 798

                                                                       
Query: 599 caaaacccataaaatatctgagagttaactccattaatttgtaattaggaaatacataca 658
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 799 caaaacccataaaatatctgagagttaacttcattaatttgtaattaggaaatacataca 858

                              
Query: 659 aacattttcaacactaagg 677
           |||||||||||||||||||
Sbjct: 859 aacattttcaacactaagg 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)