Query= MSMg01no533_j07.b1 MSMg01no533_j07.b1 CHROMAT_FILE:
MSMg01no533_j07.b1 PHD_FILE: MSMg01no533_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:49 2005
(486 letters)
>mm_chr12_43220928_43221812
Length = 885
Score = 917 bits (474), Expect = 0.0
Identities = 477/478 (99%), Gaps = 1/478 (0%)
Strand = Plus / Minus
Query: 8 ttctatgcattgtacatgaatgattcaaggattgcagccataaagattctcagaactatc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttctatgcattgtacatgaatgattcaaggattgcagccataaagattctcagaactatc 625
Query: 68 aggaaatactatttgtttttatcagcccactctagggttccactgggcctcgagtagaac 127
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 624 aggaaatactatttgtttttatcagcccactctagggttccact-ggcctcgagtagaac 566
Query: 128 ttgtcagttgccctcattcttaggaatcaattatttttagatgtgtctagttcagatcct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtcagttgccctcattcttaggaatcaattatttttagatgtgtctagttcagatcct 506
Query: 188 tatataaaattatgacctactttactatggggggtatttgtttgaaattctgcatgtaga 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatataaaattatgacctactttactatggggggtatttgtttgaaattctgcatgtaga 446
Query: 248 ggtgcaatgaggaagggaaacaagaatgagaaatgatgacctggatatccaaagtaggct 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtgcaatgaggaagggaaacaagaatgagaaatgatgacctggatatccaaagtaggct 386
Query: 308 cttggatgccttttactaattcaagatgaatatttataaaacactacctctggacatgat 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttggatgccttttactaattcaagatgaatatttataaaacactacctctggacatgat 326
Query: 368 atatgaccactaaacagctgccttcaaagccccctaggagcctaagaaaagaaggcaaga 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atatgaccactaaacagctgccttcaaagccccctaggagcctaagaaaagaaggcaaga 266
Query: 428 cagagaaaacttcctctgacatcaggctcatgtgaggaacatttggattctactaagg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagagaaaacttcctctgacatcaggctcatgtgaggaacatttggattctactaagg 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 885
Length adjustment: 10
Effective length of query: 476
Effective length of database: 875
Effective search space: 416500
Effective search space used: 416500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_j07.g1 MSMg01no533_j07.g1 CHROMAT_FILE:
MSMg01no533_j07.g1 PHD_FILE: MSMg01no533_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:49 2005
(648 letters)
>mm_chr12_43092721_43093768
Length = 1048
Score = 1237 bits (640), Expect = 0.0
Identities = 646/648 (99%)
Strand = Plus / Plus
Query: 1 tcttacccactccaccactgagtactgggagagctctgagctgccatggctgacattgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttacccactccaccactgagtactgggagagctctgagctgccatggctgacattgct 260
Query: 61 aggtacagagagagagaatagtgaaggaggaacagaattaggacccgcaaagctggtcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtacagagagagagaatagtgaaggaggaacagaattaggacccgcaaagctggtcta 320
Query: 121 tggtaagtagtcttaattaccatatatgtaaaactattaattgttcaccaatattgacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggtaagtagtcttaattaccatatatgtaaaactattaattgttcaccaatattgacca 380
Query: 181 agcaatatttgtagtttatcaacacttcaaaatgctttgtctgcttcataattgagtatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcaatatttgtagtttatcaacacttcaaaatgctttgtctgcttcataattgagtatc 440
Query: 241 atgttataaataatatttactttacattaaaattttatttggagatgtatatgtatacct 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttaaaaataatatttactttacattaaaattttatttggagatgtatatgtatacct 500
Query: 301 taatgtgagcttcctaccttgctctacataagctttaagtcccacaaaactgcaattgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatgtgagcttcctaccttgctctacataagctttaagtcccacaaaactgcaattgtc 560
Query: 361 agtgtgcttgctgaaaactgagccttagcattgatgcatcttacttggactaaacagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgtgcttgctgaaaactgagccttagcattgatgcatcttacttggactaaacagctt 620
Query: 421 agaaagtggtctgctggggatgggaaatggtttctttagtgacatgcttgctgtatgagc 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 agaaagtggtctgctggggatgggaaatggtttctttagtgacatgctcgctgtatgagc 680
Query: 481 atgaggacttgagtttgagcctcagcatctctatagaagttgagtatgctgatgcagact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgaggacttgagtttgagcctcagcatctctatagaagttgagtatgctgatgcagact 740
Query: 541 ctttaggttctaggaagatgcagatacaaagatccctggcatttgctaagcagaaattct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctttaggttctaggaagatgcagatacaaagatccctggcatttgctaagcagaaattct 800
Query: 601 agcctaactaatgagcaccaggtctgtcccatctcaaaataataaggt 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agcctaactaatgagcaccaggtctgtcccatctcaaaataataaggt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
