Query= MSMg01no534_d22.b1 MSMg01no534_d22.b1 CHROMAT_FILE:
MSMg01no534_d22.b1 PHD_FILE: MSMg01no534_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:41 2005
(289 letters)
>mm_chr12_108490754_108491442
Length = 689
Score = 466 bits (241), Expect = e-136
Identities = 283/311 (90%), Gaps = 22/311 (7%)
Strand = Plus / Plus
Query: 1 actgagaagtcctagaggaggggcttgagtgtctggtggggactcttgagctggtggaca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 actgagaagtcctagaggaggggcttgagtgtccggtggggactcttgagctggtggaca 260
Query: 61 gctgagcctattctgtttgttgccatatgtgacaagggggtaaaggtgctgactttgagt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgagtctattctgtttgttgccatatgtgacaagggggtaaaggtgctgactttgagt 320
Query: 121 caccaatattatcca----------------------atttatcctttcatgactgtgtg 158
||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 caccaatattatccaagtggaaatggaatttctttttatttatcctttcatgactgtgtg 380
Query: 159 tatggatgtttgtgtgtataagtctattgtataagtatgtttgtgtgtatgtgtatgtct 218
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtggatgtttgtgtgtataagtctattgtataagtatgtttgtgtgtatgtgtatgtct 440
Query: 219 ctgtatatgtgtgagtgtatgcagtgtcattgtctttgtgtatattgtgtttgtatgtat 278
|||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 441 ctgtatatgtatgagtgtatgcagtgtcagtgtctttgtgtatagtgtgtttgtatgtat 500
Query: 279 atgtgtgtttg 289
|||||||||||
Sbjct: 501 atgtgtgtttg 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no534_d22.g1 MSMg01no534_d22.g1 CHROMAT_FILE:
MSMg01no534_d22.g1 PHD_FILE: MSMg01no534_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:41 2005
(551 letters)
>mm_chr12_108660446_108661396
Length = 951
Score = 963 bits (498), Expect = 0.0
Identities = 537/550 (97%)
Strand = Plus / Minus
Query: 1 ctgccctgacttccctcagtgatgggcggcgggcgacatgggagcagaagatggaagaaa 60
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 861 ctgccctgacttccctcagtgatgggctgtgggcgacatgggagcagaagatggaagaaa 802
Query: 61 caattttctccccaagttacttttggtcgtggggtttcagcacagcagtggtgatcaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caattttctccccaagttacttttggtcgtggggtttcagcacagcagtggtgatcaagc 742
Query: 121 tagaataatgcataaagctgggcatggtaatgtgcctgtgtcattcctgagctccgatgg 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagaatactgcataaagctgggcatggtaatgtgcctgtgtcattcctgagctccgatgg 682
Query: 181 ggaggtggaaggtagagacaggggaatcctaagaacctcacaggcgggctagcctgacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaggtggaaggtagagacaggggaatcctaagaacctcacaggcgggctagcctgacag 622
Query: 241 cggagaaaaacaagacatggatttatttgttcttcagtaggtggaaggcaaaaacccatt 300
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 621 cggagaaaaacaagacatggacttatttgttcttcagtaggtggaaggcagaaacccatt 562
Query: 301 actaaagtttccctctgatctccacgtctatacgtgctcccttgccccgcccccatacac 360
||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 actaaggtttgcctctgatctccacatctatacgtgctcccttgccccgcccccatacat 502
Query: 361 gcacttacgaacatatgtacgtagacaggcgctcagtcaggcacagaggcatgcaggcca 420
||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 501 gcacttatgaacatatgtacgtagaaaggcactcagtcaggcacagaggcatgcaggcca 442
Query: 421 cagacatgtagacatacatgcatgtaagggaatggggagggaaggctggcttggtcctga 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 cagacatgtagacatacatgcatgcaagggaatggggagggaaggctggcttggtcctga 382
Query: 481 taatgatattctgctgtgaaacacagttaagttctgtactcacccatgatgcaatggtgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatgatattctgctgtgaaacacagttaagttctgtactcacccatgatgcaatggtgt 322
Query: 541 gcctggccct 550
||||||||||
Sbjct: 321 gcctggccct 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
