CTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATCTTACTTCTATAATGACTGCACCAATATGCATTCCCAGCAA
GAGTGCATGGGATGGTGATCAACTTTTTAGGTGTTTCTTAGCCATTTTCA
TTTCTTGTAGTGAAAACTCTCTGTTCAGACCCCTAGCCTGATTTTTGTTT
TGTAATTTTTCAATTAAGTTAATTTTTTCCTTGATTTTGTTTTGAGTTAT
TCATGTAATTTTAGATATCAATACTCTAGCAGAGGTATGATTATGTGCTG
GCAAGCAAGTCTGATGTGTTGGCACAGAAACTAGAATTATCTAAAAGGAG
GGAACCTAAATTGAGAAAATGCCTCTCTAAGATACAGTTGTAAGGCATTT
TCTTAATTAGTGGCTGGGGGAGGGCCCAGTCCTATGTGGGTAGCACCATC
CCTGGGCTGGTGCTCCTGGGTTTGATAAGACAGCAGGCTGAGCAAGCCAT
GAGGAACAAGCCAGCAAGCAGCACTCCCTTCACACCCATGGCCTCTGAAA
GAGCAGCTGCCTCCAGGTTCCTGGCTGTTTGAATTCCCGGTCCCCCCCTT
CCTTTGAATGATGAAAAAACTCTTATTGGATAGCCGACCCCCTAAATAGC
CCCTTTTTTTTTCCCAAACATATATTTTTTTTTGTACACGGGGGTTGTCC
CCGCCACG

ATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGTTTTGCCTGTACCATACCAGCCTG
GATGCCTCTCTGCTCTTGCCTACATGATAGTGGACTGAACCTCTGAACCT
GTAAGCCAGCTCCAATGAAATGTTGTCTTTCTAAGAGTTGCCTTGGTCAT
GGTGTCTGTTCACAGCAGTAAAACCCTAAGAAAACACTGTATGCCAAACC
TGGGGCCAGTCACTTCATTCTGCAGTTAGCTTAAAAAAAATGAAGGCAAA
TAATACAGTGGAATTTATTGGGAACCAGTAATATATTTTAGTAAACAGTT
CAAACATTTCCACTCTTCATCTCAAAATCATTATGTTTGGTTTCTGGGTT
TGGAAAACTGCAATTTGATGACAACTCAAACATTTAAAATGAAATGTTAT
ACCCAATGGATTTAATGAATTCTGTTTAAATATAAATATGAGCAAGTGAG
TTTTACTAATGAATTTTTTCTTTTTATCATGACTAAATAAATTCTTAAAT
AATATTTTTTCAAGTATCTGTGCAAAGGTGGTCAGATTTTAGCTTCAAGA
GCAGCTCATCTATTTTCTTTTTCTTTTTTTTTATTAGATATTTTCTTTAT
ATACATTTCAAATGTTTTCCTGAAAGTTCCCTATACTCTCCCTGCCTTGC
TCCCCTACCCACCCACTCCTGCTTC

Query= MSMg01no534_o07.g1 MSMg01no534_o07.g1 CHROMAT_FILE:
MSMg01no534_o07.g1 PHD_FILE: MSMg01no534_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:33 2005
         (653 letters)



>mm_chr12_43359555_43360608
          Length = 1054

 Score = 1210 bits (626), Expect = 0.0
 Identities = 647/654 (98%), Gaps = 1/654 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgttttgcctgtaccataccagcctggatgcctctctgctcttgcctacatgatagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgttttgcctgtaccataccagcctggatgcctctctgctcttgcctacatgatagtg 260

                                                                       
Query: 61  gactgaacctctgaacctgtaagccagctccaatgaaatgttgtctttctaagagttgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gactgaacctctgaacctgtaagccagctccaatgaaatgttgtctttctaagagttgcc 320

                                                                       
Query: 121 ttggtcatggtgtctgttcacagcagtaaaaccctaagaaaacactgtatgccaaacctg 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ttggtcatggtgtctgttcacagcagcaaaaccctaagaaaacactgtatgccaaacctg 380

                                                                       
Query: 181 gggccagtcacttcattctgcagttagcttaaaaaaaatgaaggcaaataatacagtgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggccagtcacttcattctgcagttagcttaaaaaaaatgaaggcaaataatacagtgga 440

                                                                       
Query: 241 atttattgggaaccagtaatatattttagtaaacagttcaaacatttccactcttcatct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttattgggaaccagtaatatattttagtaaacagttcaaacatttccactcttcatct 500

                                                                       
Query: 301 caaaatcattatgtttggtttctgggtttggaaaactgcaatttgatgacaactcaaaca 360
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaatcactatgtttggtttctgggtttggaaaactgcaatttgatgacaactcaaaca 560

                                                                       
Query: 361 tttaaaatgaaatgttatacccaatggatttaatgaattctgtttaaatataaatatgag 420
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttaaaatgaaatattatacccaatggatttaatgaattctgtttaaatataaatatgag 620

                                                                       
Query: 421 caagtgagttttactaatgaatttttt-ctttttatcatgactaaataaattcttaaata 479
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 caagtgagttttactaatgaatttttttctttttatcatgactaaataaattcttaaata 680

                                                                       
Query: 480 atattttttcaagtatctgtgcaaaggtggtcagattttagcttcaagagcagctcatct 539
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatttttccaagtatctgtgcaaaggtggtcagattttagcttcaagagcagctcatct 740

                                                                       
Query: 540 attttctttttctttttttttattagatattttctttatatacatttcaaatgttttcct 599
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attttctttttctgtttttttattagatattttctttatatacatttcaaatgttttcct 800

                                                                 
Query: 600 gaaagttccctatactctccctgccttgctcccctacccacccactcctgcttc 653
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 801 gaaagttccctatactctccctgccctgctcccctacccacccactcctgcttc 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space:   671292
Effective search space used:   671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)