MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-535D03
Chromosome	12 (Build37)
Map Location	71,265,398 - 71,266,010
singlet/doublet	singlet
Overlap gene	Gm804
Upstream gene	Ppil5, Rpl36al, Mgat2, 1110034A24Rik, 9330151L19Rik, Pole2, Klhdc1, Klhdc2, Sdccag1, Arf6, LOC100040856, LOC100040862, Gm71, Sos2, LOC100040879, L2hgdh, Atp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391
Downstream gene	Pygl, Trim9, Txndc1, LOC100040965, LOC100041061, Frmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ppil5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69706 MGI:1916956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rpl36al (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66483 MGI:1913733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mgat2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217664 MGI:2384966
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1110034A24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109065 MGI:1923566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9330151L19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414085 MGI:3041168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Pole2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18974 MGI:1197514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Klhdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271005 MGI:2672853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Klhdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69554 MGI:1916804
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sdccag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66244 MGI:1918305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11845 MGI:99435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040856 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040856
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100040862 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Gm71 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:207965 MGI:2684917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sos2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20663 MGI:98355
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 71 ESTs, 1 Protein

name	LOC100040879 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040879
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins pseudo : _no_value

name	L2hgdh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217666 MGI:2384968
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5s (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68055 MGI:1915305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdkl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71091 MGI:1918341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Map4k5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:399510 MGI:1925503
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Spg3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73991 MGI:1921241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622339 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622339 MGI:3646088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sav1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64010 MGI:1927144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040999 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Nin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18080 MGI:105108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	ENSMUSG00000056391 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:791312 MGI:3641988
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Gm804 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328121 MGI:2685650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Pygl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110095 MGI:97829
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trim9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94090 MGI:2137354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72736 MGI:1919986
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040965 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100041061 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Frmd6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319710 MGI:2442579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actr10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56444 MGI:1891654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Psma3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19167 MGI:104883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3110056K07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73204 MGI:1920454
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs

name	Arid4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238247 MGI:2444354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Timm9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30056 MGI:1353436
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC100041035 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs

name	2700049A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76967 MGI:1924217
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 108 ESTs, 1 Protein

name	Ppil5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487160 GeneID:69706 MGI:1916956
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidylprolyl isomerase (cyclophilin) like 5 transcript_id : NM_001081406.1

name	Rpl36al (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368433 GeneID:66483 MGI:1913733
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L36a-like transcript_id : NM_025589.2

name	Mgat2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122520 GeneID:217664 MGI:2384966
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannoside acetylglucosaminyltransferase 2 transcript_id : NM_146035.1

name	1110034A24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66793420 GeneID:109065 MGI:1923566
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1110034A24 gene transcript_id : NM_027269.3

name	Pole2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803017 GeneID:18974 MGI:1197514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), epsilon 2 (p59 subunit) transcript_id : NM_011133.2

name	Klhdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803414 GeneID:271005 MGI:2672853
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch domain containing 1 transcript_id : NM_178253.3

name	Klhdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367655 GeneID:69554 MGI:1916804
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch domain containing 2 transcript_id : NM_027117.2

name	Sdccag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32130520 GeneID:66244 MGI:1918305
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serologically defined colon cancer antigen 1 transcript_id : NM_025441.2

name	Arf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47106055 GeneID:11845 MGI:99435
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADP-ribosylation factor 6 transcript_id : NM_007481.2

name	LOC100040856 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263270 GeneID:100040856
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001475395.1

name	LOC100040862 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263272 GeneID:100040862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100040862 transcript_id : XM_001475411.1

name	Gm71 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:98986328 GeneID:207965 MGI:2684917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 71, (NCBI) transcript_id : NM_001033236.2

name	Sos2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263275 GeneID:20663 MGI:98355
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 71 ESTs, 1 Protein product : Son of sevenless homolog 2 (Drosophila) transcript_id : XM_127051.8

name	L2hgdh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703883 GeneID:217666 MGI:2384968
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : L-2-hydroxyglutarate dehydrogenase transcript_id : NM_145443.1

name	Atp5s (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13386039 GeneID:68055 MGI:1915305
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s transcript_id : NM_026536.1

name	Cdkl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366600 GeneID:71091 MGI:1918341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin-dependent kinase-like 1 (CDC2-related kinase) transcript_id : NM_183294.2

name	Map4k5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77736532 GeneID:399510 MGI:1925503
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : mitogen-activated protein kinase kinase kinase kinase 5 transcript_id : NM_024275.2

name	Spg3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348381 GeneID:73991 MGI:1921241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spastic paraplegia 3A homolog (human) transcript_id : NM_178628.4

name	EG622339 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486830 GeneID:622339 MGI:3646088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622339 transcript_id : NM_001081297.1

name	Sav1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130409 GeneID:64010 MGI:1927144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : salvador homolog 1 (Drosophila) transcript_id : NM_022028.2

name	LOC100040999 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263281 GeneID:100040999
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : similar to Spg3a protein transcript_id : XM_001475450.1

name	Nin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125346100 GeneID:18080 MGI:105108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ninein transcript_id : NM_001081453.1

name	Nin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125346155 GeneID:18080 MGI:105108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ninein transcript_id : NM_008697.2

name	ENSMUSG00000056391 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263277 GeneID:791312 MGI:3641988
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : predicted gene, ENSMUSG00000056391 transcript_id : XM_001475522.1

name	Gm804 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263283 GeneID:328121 MGI:2685650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 804, (NCBI), transcript variant 1 transcript_id : XM_001475466.1

name	Gm804 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263285 GeneID:328121 MGI:2685650
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : gene model 804, (NCBI), transcript variant 2 transcript_id : XM_001475489.1

name	Pygl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:18875341 GeneID:110095 MGI:97829
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : liver glycogen phosphorylase transcript_id : NM_133198.1

name	Trim9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374604 GeneID:94090 MGI:2137354
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tripartite motif protein 9 transcript_id : NM_053167.2

name	Txndc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859721 GeneID:72736 MGI:1919986
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 1 transcript_id : NM_028339.1

name	LOC100040965 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263279 GeneID:100040965
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to Ubtf protein transcript_id : XM_001475577.1

name	LOC100041061 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263290 GeneID:100041061
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041061 transcript_id : XM_001475657.1

name	Frmd6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328509 GeneID:319710 MGI:2442579
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FERM domain containing 6 transcript_id : NM_028127.3

name	Actr10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9789886 GeneID:56444 MGI:1891654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ARP10 actin-related protein 10 homolog (S. cerevisiae) transcript_id : NM_019785.1

name	Psma3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385658 GeneID:19167 MGI:104883
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) subunit, alpha type 3 transcript_id : NM_011184.3

name	3110056K07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263287 GeneID:73204 MGI:1920454
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs product : RIKEN cDNA 3110056K07 gene transcript_id : XM_898262.3

name	Arid4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487104 GeneID:238247 MGI:2444354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : AT rich interactive domain 4A (Rbp1 like) transcript_id : NM_001081195.1

name	Timm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67846098 GeneID:30056 MGI:1353436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 9 homolog (yeast) transcript_id : NM_001024854.1

name	Timm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67846097 GeneID:30056 MGI:1353436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 9 homolog (yeast) transcript_id : NM_013896.3

name	Timm9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67846108 GeneID:30056 MGI:1353436
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : translocase of inner mitochondrial membrane 9 homolog (yeast) transcript_id : NM_001024853.1

name	LOC100041035 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263288 GeneID:100041035
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs product : hypothetical protein LOC100041035 transcript_id : XM_001475684.1

name	2700049A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94392886 GeneID:76967 MGI:1924217
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 108 ESTs product : RIKEN cDNA 2700049A03 gene transcript_id : XM_126944.6

name	Ppil5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487161 GeneID:69706 MGI:1916956
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : peptidylprolyl isomerase (cyclophilin)-like 5 protein_id : NP_001074875.1

name	Rpl36al (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385038 CCDS:CCDS25946.1 GeneID:66483 MGI:1913733
definition	codon_start : 1 product : ribosomal protein L36a-like protein_id : NP_079865.1

name	Mgat2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122521 CCDS:CCDS25947.1 GeneID:217664 MGI:2384966
definition	GO_component : GO:0005795 - Golgi stack [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008455 - alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity [Evidence IMP]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0009312 - oligosaccharide biosynthesis [Evidence IEA]; GO:0018279 - protein amino acid N-linked glycosylation via asparagine [Evidence IMP] codon_start : 1 product : mannoside acetylglucosaminyltransferase 2 protein_id : NP_666147.1

name	1110034A24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66793421 CCDS:CCDS25948.1 GeneID:109065 MGI:1923566
definition	codon_start : 1 product : hypothetical protein LOC109065 protein_id : NP_081545.3

name	Pole2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468927 GeneID:18974 MGI:1197514
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA] codon_start : 1 note : DNA polymerase epsilon, subunit 2; DNA polymerase epsilon small subunit product : DNA polymerase epsilon subunit 2 protein_id : NP_035263.1

name	Klhdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30142701 CCDS:CCDS25949.1 GeneID:271005 MGI:2672853
definition	codon_start : 1 product : kelch domain containing 1 protein_id : NP_839984.1

name	Klhdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312320 CCDS:CCDS25950.1 GeneID:69554 MGI:1916804
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : kelch domain containing 2 protein_id : NP_081393.1

name	Sdccag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32130521 CCDS:CCDS25951.1 GeneID:66244 MGI:1918305
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : serologically defined colon cancer antigen 1 protein_id : NP_079717.2

name	Arf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680724 CCDS:CCDS25952.1 GeneID:11845 MGI:99435
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005768 - endosome [Evidence TAS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence TAS]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0015031 - protein transport [Evidence TAS]; GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ADP-ribosylation factor 6 protein_id : NP_031507.1

name	LOC100040856 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263271 GeneID:100040856
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475445.1

name	LOC100040862 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263273 GeneID:100040862
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475461.1

name	Gm71 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:98986329 GeneID:207965 MGI:2684917
definition	codon_start : 1 product : hypothetical protein LOC207965 protein_id : NP_001028408.2

name	Sos2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263276 GeneID:20663 MGI:98355
definition	codon_start : 1 product : Son of sevenless homolog 2 protein_id : XP_127051.8

name	L2hgdh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703884 CCDS:CCDS25953.1 GeneID:217666 MGI:2384968
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0031305 - integral to mitochondrial inner membrane [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0047545 - 2-hydroxyglutarate dehydrogenase activity [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0044267 - cellular protein metabolism [Evidence ISS]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : L-2-hydroxyglutarate dehydrogenase protein_id : NP_663418.1

name	Atp5s (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386040 CCDS:CCDS25954.1 GeneID:68055 MGI:1915305
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA] [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ATP synthase, H+ transporting, mitochondrial F0 complex, subunit s protein_id : NP_080812.1

name	Cdkl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34304105 CCDS:CCDS25955.1 GeneID:71091 MGI:1918341
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : cyclin-dependent kinase-like 1 (CDC2-related kinase) protein_id : NP_899117.1

name	Map4k5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77736533 GeneID:399510 MGI:1925503
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence ISS] [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS] [Evidence IEA]; GO:0005083 - small GTPase regulator activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007243 - protein kinase cascade [Evidence ISS]; GO:0006950 - response to stress [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : mitogen-activated protein kinase kinase kinase kinase 5 isoform 2 protein_id : NP_077237.2

name	Spg3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519971 GeneID:73991 MGI:1921241
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 product : atlastin protein_id : NP_848743.1

name	EG622339 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486831 GeneID:622339 MGI:3646088
definition	GO_function : GO:0004365 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA] GO_process : GO:0006006 - glucose metabolism [Evidence IEA]; GO:0006096 - glycolysis [Evidence IEA] codon_start : 1 product : predicted gene, EG622339 protein_id : NP_001074766.1

name	Sav1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11528514 CCDS:CCDS25956.1 GeneID:64010 MGI:1927144
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : WW domain-containing protein 3; WW domain-containing protein 4 product : salvador homolog 1 protein_id : NP_071311.1

name	LOC100040999 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263282 GeneID:100040999
definition	codon_start : 1 product : similar to Spg3a protein protein_id : XP_001475500.1

name	Nin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125346101 GeneID:18080 MGI:105108
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0051642 - centrosome localization [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : ninein isoform 1 protein_id : NP_001074922.1

name	Nin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125346156 GeneID:18080 MGI:105108
definition	GO_component : GO:0005813 - centrosome [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0051642 - centrosome localization [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ninein isoform 2 protein_id : NP_032723.2

name	ENSMUSG00000056391 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263278 GeneID:791312 MGI:3641988
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475572.1

name	Gm804 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263284 GeneID:328121 MGI:2685650
definition	codon_start : 1 product : similar to C14ORF29 isoform 1 protein_id : XP_001475516.1

name	Gm804 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263286 GeneID:328121 MGI:2685650
definition	codon_start : 1 product : similar to C14ORF29 isoform 2 protein_id : XP_001475539.1

name	Pygl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875342 CCDS:CCDS25957.1 GeneID:110095 MGI:97829
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004645 - phosphorylase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0005977 - glycogen metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : liver glycogen phosphorylase protein_id : NP_573461.1

name	Trim9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930487 GeneID:94090 MGI:2137354
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0019717 - synaptosome [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0016079 - synaptic vesicle exocytosis [Evidence ISS] codon_start : 1 exception : mismatches in translation product : tripartite motif protein 9 protein_id : NP_444397.1

name	Txndc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859722 CCDS:CCDS25958.1 GeneID:72736 MGI:1919986
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : thioredoxin domain containing 1 protein_id : NP_082615.1

name	LOC100040965 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263280 GeneID:100040965
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475627.1

name	LOC100041061 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263291 GeneID:100041061
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475707.1

name	Frmd6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328510 CCDS:CCDS25959.1 GeneID:319710 MGI:2442579
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : FERM domain containing 6 protein_id : NP_082403.2

name	Actr10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789887 CCDS:CCDS25960.1 GeneID:56444 MGI:1891654
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005869 - dynactin complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IDA] codon_start : 1 exception : mismatches in translation note : actin-related protein 11; actin-related protein 10 homolog; actin-related protein 11 homolog product : ARP10 actin-related protein 10 homolog protein_id : NP_062759.1

name	Psma3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981534 CCDS:CCDS25961.1 GeneID:19167 MGI:104883
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0005839 - proteasome core complex (sensu Eukaryota) [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004298 - threonine endopeptidase activity [Evidence IEA] GO_process : GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : proteasome (prosome, macropain) subunit, alpha type 3 protein_id : NP_035314.2

name	3110056K07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94392923 GeneID:73204 MGI:1920454
definition	codon_start : 1 product : hypothetical protein LOC73204 protein_id : XP_903355.2

name	Arid4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487105 GeneID:238247 MGI:2444354
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0000785 - chromatin [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006333 - chromatin assembly or disassembly [Evidence IEA] codon_start : 1 note : retinoblastoma binding protein 1 product : retinoblastoma-binding protein 1 protein_id : NP_001074664.1

name	Timm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67846109 CCDS:CCDS25962.1 GeneID:30056 MGI:1353436
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : translocase of inner mitochondrial membrane 10 homolog protein_id : NP_001020024.1

name	Timm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67846099 CCDS:CCDS25962.1 GeneID:30056 MGI:1353436
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : translocase of inner mitochondrial membrane 10 homolog protein_id : NP_001020025.1

name	Timm9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305573 CCDS:CCDS25962.1 GeneID:30056 MGI:1353436
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : translocase of inner mitochondrial membrane 10 homolog protein_id : NP_038924.1

name	LOC100041035 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263289 GeneID:100041035
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475734.1

name	2700049A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82942749 GeneID:76967 MGI:1924217
definition	codon_start : 1 product : hypothetical protein LOC76967 protein_id : XP_126944.5

name	9330151L19Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149263269 GeneID:414085 MGI:3041168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : RIKEN cDNA 9330151L19 gene transcript_id : XR_035259.1

name	LOC100040879 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263274 GeneID:100040879
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins product : similar to Chloride intracellular channel 4 pseudo : _no_value transcript_id : XR_032101.1

clone name	MSMg01-331P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128M03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-271K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-392N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138O03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-535D03.T7 (MSMg01no535_d03.b1)	MSMg01-535D03.TJ (MSMg01no535_d03.g1)
ACC	AG602701	AG602702
length	785	1,257
length of high quality (start - end)	615 (42 - 656)	---
definition	CHROMAT_FILE: MSMg01no535_d03.b1 PHD_FILE: MSMg01no535_d03.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:12:56 2005	CHROMAT_FILE: MSMg01no535_d03.g1 PHD_FILE: MSMg01no535_d03.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 21:12:56 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGGAA TTCCACTCTAACATATTTATTCATGCCTCAGTCTCTGTGGTCCCTGTCTG GCACTGTCACAGAGCTGGCCTCCCAAAAGCCTGTTGTCCTTTGATGTGTT GTCAAAGCCTTCCCTGGCCCAGACTATTATCAGTTGAGAACTGCAGGACA GCTCTGCCTGGGGGAGGAGCAGCTCTGCCTGGGGGAGGAGCAGGGTAGCA CAAACCCAGGATCTCCCTCGAATCTGTGGGGGTAGGGCTCAAACCCAGTG ATGGGCTCAGGGAACCTGCCCACTGGCTACCTCGCCTGTGCCTCTTTGTC ATGTCCTGTCAGGTGATGATGGCTTTCTCAAGTCTTGCCTTCTCTCTGTC TGTTTCAGAATCACATTCCCTGAGATTTCTCAGTGAAGCTGAGCAGTGGT CAGCCTTGTTTAACATTGTTCTGATTTATGAAGTTGGACAGTGCTCCAGT AGGGTTTATTTAAAGGGTCAGTAGACCATACTGCCATGCCTATGTCTCGG TGTGGATCTGAAATTGTACTCAGTTGATTCAGATTCACCAGGCACACCAT CCTCAGCCTTTGCCCTGCAGTCTCAGCTCACAGCCAGCAGTGTCCTGAGC ACTGAGCACCAGTCCCCAAACAGGAAGTCCCTGGAGATTTGTTAAAGCAC CCAAATGAGCATATTTAGACATGGGAAAATCTGGTAAAGTTGTATATAAA ATTTGAAGTGTGGCTTCGTATTGTTTCTAGGGAAT	TATATACTATTTCTCTTCCATTAACGCCTACGCACTTTACTATCTATATA CTATACATATACTCTTCATAAATTTAAATTTTCTATCACTATATATATAT ATATTAACACCAATACAAAATAACCACTTAANATACGATATACTATATTA CAATACACGACGTACTATTATTTATAATTATATACATCATATCTTATAAA TTCCTCTATTTCTTTTTTAACTCGATATTCTATATATNATATACGAATAC ATTCGACATAACTACTCATCGAACGTAAAATTCGCTACACGATATACTCA TACGTCTAACTTAATCTATACCGTATTTCATATTTCGACTATATAATCCA CACTNNNNTTATATACATATCTTATATATATATATCATATCAATATATTA CTCCTGTGAATCTATCATCATCAAATACATATATATCTTATTTCATAAAT TATCTCAACTGTTCCATCTTCTTACCATTACTTATACCACCTCACACAAA AATATCTCTCACTAATACATATACTACAACCACTAAACTACACCATTATC ACTATTACTAGATCATCAACTCTCATACAACCAATCTCTACAACATATTC ATCCACCAAAACACACTTTCACTCATATANTNCTATATATAAATATCATT CAAACATACACGACATCCATCTACCAATACAACACATAGAGCCTATATAA TATACTATCACAATATATTAATAATACTAACACATACAACACAAATATNA TATATTATAAATACAATAGATATAACGAATATCTGTTACAACAAGATTCA ATGATAATACATAACAATAATTTCCCTNTCTATTNTATANTCGTTATTAA TACTACTAACACANAACTNNCACAACCTCTACTCAACTATAAATACTATA TCAANATAATATATCTATTATTTACTTACATCAGACACATCTATCTATCA CCTCAATATATATATTCATATACATTGACAGTTTCCACATTAACACAATC ATACTCCTTAACTAATCAATCATATTTCTTATCGACTCTATATCTCATAT TCATAACACATTTACCTCACCCNTCCCNTNTNTNCACTATATATAATAAT AAGTAATTTAACGATACATAACTATTATTCATCAACCTATCTTANNNAGA ANGGGAAACACACTATTACNAATATACCTCTCTATCTATCTCTAATCTCT CATACATCTATTTATATCTACTCTATTCCATCCNNATTTATCTGCCGCAC GCGGCAG
quality values	Open. Hide. 9 10 10 9 14 23 35 34 42 37 37 37 37 33 30 30 25 27 30 32 33 47 41 33 33 29 29 18 23 26 27 11 10 8 8 8 8 8 19 22 23 18 18 28 37 41 47 35 36 35 35 53 50 50 50 50 50 57 57 50 50 48 48 42 42 48 54 54 54 42 42 42 42 42 47 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 57 57 57 59 59 68 57 57 57 57 57 57 57 57 57 59 59 57 57 57 68 68 57 57 57 57 57 57 68 51 51 50 50 50 51 68 68 57 57 57 57 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 57 57 52 57 57 68 68 68 68 57 57 59 59 57 59 57 68 68 68 68 68 68 57 68 57 59 57 57 57 57 57 57 57 57 57 57 57 57 59 59 59 62 62 68 68 68 68 68 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 52 52 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 52 62 62 62 62 52 52 62 62 68 68 68 68 68 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 59 59 59 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 59 68 68 68 57 57 57 57 59 59 59 59 59 59 59 57 59 59 68 68 68 57 57 57 48 48 57 57 57 57 57 57 57 57 57 59 68 68 57 57 57 57 48 57 57 57 59 44 44 33 42 44 59 59 57 57 48 59 59 35 35 35 44 44 57 57 57 47 44 40 39 44 43 44 48 57 57 57 57 57 57 54 54 54 59 57 57 57 57 57 57 48 48 48 57 57 57 57 59 59 59 59 59 57 57 57 48 48 48 59 47 47 37 36 32 31 24 34 32 31 31 43 39 41 41 41 41 41 48 48 48 48 59 59 48 48 48 48 39 47 33 33 28 40 40 48 48 59 48 57 47 47 39 39 37 43 43 48 48 48 48 48 48 48 47 39 39 39 41 41 41 31 36 38 39 41 41 47 37 39 37 37 37 37 41 39 39 32 28 20 20 28 25 27 30 37 26 22 14 17 14 27 27 28 28 24 32 32 46 43 39 39 46 47 48 47 43 39 39 39 30 26 18 24 28 27 34 39 40 37 32 32 41 43 37 37 32 33 28 25 28 24 14 18 24 24 26 28 31 28 33 26 24 30 23 23 15 19 19 19 19 22 29 32 34 28 28 20 28 28 28 28 13 12 12 21 17 14 12 12 12 15 19 25 16 16 16 21 25 32 31 29 31 18 23 14 18 22 37 37 24 24 13 13 11 17 17 30 32 22 22 24 24 20 25 23 23 19 28 20 18 18 32 28 39 31 31 21 28 19 37 37 30 30 31 30 28 28 28 31 31 31 36 39 34 30 29 32 37 30 28 25 33 31 39 31 37 31 31 35 33 32 32 33 31 27 18 20 19 15 15 28 24 26 22 19 24 20 20 18 26 32 24 25 12 12 12 19 18 25 30 18 20 16 15 12 10 10 15 17 17 10 10	Open. Hide. 12 12 10 12 12 10 10 10 10 10 10 10 10 13 8 8 8 9 10 12 17 15 9 6 6 8 8 10 8 8 6 6 7 8 8 8 8 6 9 12 8 10 8 10 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 10 10 8 6 6 8 8 10 11 11 12 11 8 8 8 8 8 8 9 9 9 9 9 13 8 8 6 7 10 7 8 12 13 15 10 10 8 8 6 6 6 6 6 6 8 6 10 7 6 10 10 13 12 13 13 8 8 9 9 8 8 8 3 0 3 8 8 8 10 9 10 8 8 8 6 6 6 8 8 8 8 8 8 6 6 10 8 6 7 8 8 10 6 6 6 7 10 8 10 8 8 8 8 9 6 8 6 6 8 8 8 13 13 15 10 8 8 8 8 8 8 8 8 8 9 8 8 8 8 10 10 9 9 9 9 9 9 11 11 13 9 8 7 7 8 8 8 8 7 7 7 6 6 7 9 9 9 9 6 6 6 6 6 6 8 8 8 12 3 0 3 7 8 6 9 9 8 8 10 8 8 8 9 9 7 6 8 8 8 8 6 8 6 6 8 10 8 8 8 8 8 8 8 8 11 11 11 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 12 15 15 8 8 8 8 8 8 10 10 9 9 9 8 8 8 8 6 6 8 8 8 6 6 6 7 7 6 6 6 6 6 10 15 13 12 6 6 8 8 6 6 8 8 9 9 8 8 8 8 12 9 9 8 8 8 8 10 6 7 7 7 3 0 0 0 0 3 7 8 8 15 8 8 8 6 6 8 6 8 8 8 8 9 8 8 10 9 10 10 10 10 10 10 10 8 8 8 8 8 8 8 9 8 8 6 6 8 8 9 8 11 6 6 8 6 9 9 9 13 10 10 10 9 8 10 10 10 10 10 9 6 10 6 8 8 8 8 8 8 9 12 11 14 11 9 8 8 8 8 8 8 11 7 6 8 7 8 8 8 8 8 8 8 8 8 9 10 9 9 9 10 6 6 6 6 7 8 8 9 11 9 9 9 7 6 10 7 6 6 8 8 10 8 8 8 8 8 8 10 10 9 8 8 9 9 10 9 8 7 7 8 7 12 10 17 10 9 9 9 9 8 8 10 12 10 10 8 8 6 6 6 6 8 8 6 6 6 6 10 15 15 13 10 10 10 10 12 12 9 11 10 6 6 8 6 10 10 10 14 8 8 6 6 8 6 8 8 9 9 9 9 9 10 10 7 8 7 8 8 9 8 8 6 6 8 6 8 7 9 9 9 11 8 8 6 6 6 6 8 10 10 10 10 8 10 10 6 8 6 6 8 11 10 10 6 6 8 11 8 6 6 6 7 7 8 8 6 6 6 6 13 14 11 10 10 8 3 0 3 0 3 12 10 10 10 9 9 11 9 9 9 9 9 9 10 10 10 10 11 11 15 11 11 10 13 10 10 10 9 9 9 15 8 6 6 6 6 6 8 8 6 6 8 8 9 9 8 13 13 8 8 8 8 6 6 6 6 6 6 6 7 13 7 6 6 6 8 8 6 6 6 6 6 6 12 8 10 10 8 8 8 10 12 17 18 24 20 20 18 18 17 9 14 8 8 8 8 8 8 6 8 6 10 6 7 12 6 6 7 6 7 10 10 8 8 3 0 3 11 8 6 8 8 8 13 8 8 8 10 8 10 9 7 11 8 9 9 9 10 15 10 10 6 6 6 6 8 8 10 10 17 13 8 6 6 7 7 7 9 10 9 9 9 9 9 9 8 8 7 6 6 6 6 8 8 10 10 9 9 8 10 6 6 6 8 8 8 8 8 8 8 7 8 8 3 0 3 8 8 8 8 3 0 3 8 13 3 0 3 7 7 6 8 6 6 6 6 6 7 8 8 10 8 8 8 10 8 7 6 6 3 0 3 10 13 3 0 0 3 6 6 6 6 6 6 6 8 10 8 6 6 6 6 6 6 6 7 8 8 6 6 6 7 6 6 8 13 8 8 8 8 3 0 3 6 8 9 7 11 6 6 6 8 8 10 15 15 12 13 8 8 8 8 8 6 8 14 6 8 8 6 6 6 8 8 10 10 8 8 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 21 19 19 8 8 9 13 12 10 8 8 8 8 6 6 6 6 8 6 6 6 6 6 6 8 10 10 8 10 6 6 6 6 8 8 8 6 6 8 8 8 8 10 10 10 6 9 8 8 8 8 10 10 8 6 6 6 6 6 6 6 9 11 11 11 13 7 7 8 7 7 10 10 16 10 9 9 9 9 9 8 9 9 8 8 11 8 8 8 10 9 9 9 10 11 8 6 6 6 6 6 8 8 10 8 8 8 8 8 8 8 12 11 11 3 0 3 6 8 3 0 3 0 3 0 3 0 3 6 6 8 8 8 8 8 9 9 9 8 10 10 9 8 8 8 6 6 7 8 8 10 8 6 6 6 6 6 8 6 8 6 6 6 6 8 16 22 17 11 9 9 8 8 9 8 8 8 8 8 8 9 9 10 10 10 12 3 0 0 0 3 7 8 3 0 3 11 8 6 8 8 8 8 6 6 6 6 6 6 6 6 3 0 3 7 6 6 6 10 6 8 9 9 9 9 9 10 9 9 9 10 9 12 16 16 10 10 8 11 10 8 8 9 8 8 8 11 11 8 8 8 8 7 6 12 8 13 10 8 6 6 6 8 8 9 7 6 6 6 8 8 6 7 7 9 3 0 0 3 9 9 8 8 8 9 6 6 6 6 6 6 6 9 9 6 6 6 6 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no535_d03.b1 MSMg01no535_d03.b1 CHROMAT_FILE:
MSMg01no535_d03.b1 PHD_FILE: MSMg01no535_d03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:12:56 2005
         (615 letters)



>mm_chr12_71265192_71266210
          Length = 1019

 Score = 1112 bits (575), Expect = 0.0
 Identities = 602/613 (98%), Gaps = 4/613 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattccactctaacatatttattcatgcctcagtctctgtggtccctgtctggcactgt 66
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccactctaacatatttattcatgcctcagtctctgtggtccctgtctggcactgt 266

                                                                       
Query: 67  cacagagctggcctcccaaaagcctgttgtcctttgatgtgttgtcaaagccttccctgg 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cacagagctggcctcccaaaagcctgttgtcctttgatgtgttgtcaaagccttccctgg 326

                                                                       
Query: 127 cccagactattatcagttgagaactgcaggacagctctgcctgggggaggagcagctctg 186
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 327 cccagactattatcagttgagaactgcaggacagctctacctgggggaggagcagctctg 386

                                                                       
Query: 187 cctgggggaggagcagggtagcacaaacccaggatctccctcgaatctgtgggggtaggg 246
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cctaggggaggagcagggtagcacaaacccaggatctccctcgaatctgtgggggtaggg 446

                                                                       
Query: 247 ctcaaacccagtgatgggctcagggaacctgcccactggctacctcgcctgtgcctcttt 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctcaaacccagtgatgggctcagggaacctgcccactggctacctcgcctgtgcctcttt 506

                                                                       
Query: 307 gtc----atgtcctgtcaggtgatgatggctttctcaagtcttgccttctctctgtctgt 362
           |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gtctgtcatgtcctgtcaggtgatgatggctttctcaagtcttgccttctctctgtctgt 566

                                                                       
Query: 363 ttcagaatcacattccctgagatttctcagtgaagctgagcagtggtcagccttgtttaa 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttcagaatcacattccctgagatttctcagtgaagctgagcagtggtcagccttgtttaa 626

                                                                       
Query: 423 cattgttctgatttatgaagttggacagtgctccagtagggtttatttaaagggtcagta 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 627 cattgttctgatttatgaagttggacagtgctccagtagggtttatttaaaggatcagta 686

                                                                       
Query: 483 gaccatactgccatgcctatgtctcggtgtggatctgaaattgtactcagttgattcaga 542
           ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||
Sbjct: 687 gaccatactgccatgcctatgccttggtgtggatctgaaattgtactcaattgattcaga 746

                                                                       
Query: 543 ttcaccaggcacaccatcctcagcctttgccctgcagtctcagctcacagccagcagtgt 602
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ttcaccaggcgcaccatcctcagcctttgccctgcagtctcagctcacagccagcagtgt 806

                        
Query: 603 cctgagcactgag 615
           |||||||||||||
Sbjct: 807 cctgagcactgag 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1019
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1009
Effective search space:   610445
Effective search space used:   610445
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information