Query= MSMg01no536_a08.b1 MSMg01no536_a08.b1 CHROMAT_FILE:
MSMg01no536_a08.b1 PHD_FILE: MSMg01no536_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:00 2005
(640 letters)
>mm_chr12_75425588_75426626
Length = 1039
Score = 1143 bits (591), Expect = 0.0
Identities = 624/635 (98%), Gaps = 1/635 (0%)
Strand = Plus / Minus
Query: 5 gaattctaaagggtcagcccagacccatggctcccaggagattagctgaggggctttcgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 gaattctaaagggtcagcccagacccatggctcccaggagattagctgaggggctttcgt 779
Query: 65 ggaagggtgttaccgctcaccttctgtggtcagctctacttccttctcttcctttcacag 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ggtagggtgttaccgctcaccttctgtggtcagctctacttccttctcttcctttcacag 719
Query: 125 atatttattgcctaagtacctgatatcggatgctctgatctgaggcagtctcctcagagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atatttattgcctaagtacctgatatcggatgctctgatctgaggcagtctcctcagagc 659
Query: 185 ccatttcctgttttaaccagtctataaaactgagaaactggtgagcgagaggtgacaggc 244
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 658 ccatttcctgttttaaccagtctataaaactgagaaactggtgggcaagaggtgacaggc 599
Query: 245 cttcttgtgctgaggaatcttctgttgctgcttccagatgtcatctctgcctttctgtct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cttcttgtgctgaggaatcttctgttgctgcttccagatgtcatctctgcctttctgtct 539
Query: 305 tcctgtgggctacatcctccaacctcctttgcctgctgacttctcagccctgggagagtg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 538 tcctgtgggctacatcctccaacctcctttgcctgctgacttctcagccctgggagagcg 479
Query: 365 aatgtgaacacatgagccaattacagtctatgtgacctggctcccttgtaggctggcctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatgtgaacacatgagccaattacagtctatgtgacctggctcccttgtaggctggcctt 419
Query: 425 gtcttggaccagggctactgtactgtgaagaacctatcacatgagatctctcatgaggtg 484
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 418 ggcttggaccagggctactgtactgtgaagaacctatcacatgagatctctcatgagata 359
Query: 485 gcctcagttctctccagtgtctcctagcttccccctgcccccctgctcttcccttcagct 544
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 358 gcctcagttctctccagtgtctcctagcttcaccctgccccc-tgctcttcccttcagct 300
Query: 545 ctaagatctgaaaggatgctcatctggggagcttaattgccttgctttcccttagtgctg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ctaagatctgaaaggatgctcatctggggagcttaattgccttgctttcccttagtgctg 240
Query: 605 cccacaattttcacaggactcttagtgttatccta 639
||||||||||||| |||||||||| ||||||||||
Sbjct: 239 cccacaattttcaaaggactcttattgttatccta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1039
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1029
Effective search space: 648270
Effective search space used: 648270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_a08.g1 MSMg01no536_a08.g1 CHROMAT_FILE:
MSMg01no536_a08.g1 PHD_FILE: MSMg01no536_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:00 2005
(526 letters)
>mm_chr12_75372516_75373440
Length = 925
Score = 963 bits (498), Expect = 0.0
Identities = 519/526 (98%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 1 caggctcccaattcagggacaacaacccggagacattggacatgaatcatttagcttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggctcccaattcagggacaacaacccggagacattggacatgaatcatttagcttaat 260
Query: 61 gctttccagtggggataagtaggaatgatacagttgttgtgtgggaggtgggaagactgg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 261 gctttccagtggggataagtaggaatgatgcagttgttgtgtgggaggtgggaagaccgg 320
Query: 121 gaagtgacttaaagtcacaatgacccagaaagtagaaccccactggagaggacactgtac 180
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagtgacttatggtcacaatgacccagaaagtagaaccccactggagaggacactgtac 380
Query: 181 actgtctgatcttggcacatggatagagtcagaggacacttaacaatgagactttagctt 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgtctgatcttg-cacatggatagagtcagaggacacttaacaatgagactttagctt 439
Query: 241 agacattaccaaaagtatgtatgggttgtttctcattagcttaactgtatttgttcaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agacattaccaaaagtatgtatgggttgtttctcattagcttaactgtatttgttcaatt 499
Query: 301 tcctcttgtctatcactgggttattgggggtggtgcagagcttacgaatcttcctgaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcctcttgtctatcactgggttattgggggtggtgcagagcttacgaatcttcctgaagt 559
Query: 361 cattggctaacattaaaatcacagtacttagtaatatacgatcattaagttgtttacaat 420
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 560 cattggctaacattaaaatcacagtacttactaatatacaatcattaagttgtttacaat 619
Query: 421 tatttgtagtccaaactagactttctaattgtgggttggaaggaaatgagacacatttgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tatttgtagtccaaactagactttctaattgtgggttggaaggaaatgagacacatttgg 679
Query: 481 ctaaaggaatcagggaaaaactgctggcagtccctaagttggtggc 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctaaaggaatcagggaaaaactgctggcagtccctaagttggtggc 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
