NTTTTAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGGAGC
GCGGAATTCCTTAAATTTACAAGAAAATTCCAAAACCTTTGGGAAGATAT
CCAGGTAAATTTTATGTGAAGCCAAATTTCAATTGCCATCATTAATACCC
AATTCCTCATGTCATTAAGAGTATAGAAAACGCTGAGACAATGAGTTTTT
CTTTCCTACTGTTTCTATGAACATAAAGTAGGACTTCAGTTTGTCATTCT
TGTCCATATTTATAGTTTGGTAAAGCAGTTGCTACCGTAATCTCTGCAAA
GATTTCCAAGAATTTCATGTAAGCTTCTCTATGAGATATATCTTATTTAC
TAATATGTTATAACTAAGTTATATTGCTACATAATTTAGGCCATTCTAGT
TATTGACATTTTGGTAGATACTACAAGCAAATAACACCCCCAAATTTAAT
AGATACTAAAAGCTTTTATAGTAACTACTCAGCTTATGCACTTTGGAAAA
ATATAAAAAATGTCATCTGGCAAGAAAGGCTACATTCATATGCTTTTCTT
ATGAAAAGCTGAAAACAGGAATGAAGTTTTGTTCACATAAAGACTAAAGC
AAACAAAGGAATACGACTCAGCTATTAAGAACAAGGACATCCTGAGGTTT
TCAGGCAAATGGATGGTACAGGAAATATCATCCTGAGTGAGATAACTCAT
GGACCAAAGGACATGCAAAGGACATGCATGGTATGTACTTCCTAATAAGT
GGATTGGAACAACACCACCACCATACCGAATTN

GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXATTTTATAAACATCAAGTATCTTGAATGCTGTTTTAAACTTAT
TAGGCAAGGACTGAAGGAGCTGAAGGGGTTTGCAACCCCATAGGAAGAAC
AACAATATTAACCAACCAGAGCTCCCAGTATATAAACCATCAACTATGGA
GTACACATGGAAGGACCCATGGCTCCAGCCATATATGTAGCAGAGGATGG
CCTAGTTGGACATCAATGGAAAAAGAGGCCTTTGTTCCAGAGAAGCCTTG
ATGCCCCAGTGTAGGGGAATGCAAGGGCAGAGAGGCAGGAGTGGTCAGGT
GGGTGGGTGTTGGGGGGGCACACCATCATAGAAGCAGGAGGAGGGGGGAT
GGGATAGGGTGNNNTNNNNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTNNTNNNTTTTTTNNNTTTTNTTTTTTTTTTNTTTTTTTNTTNTNNT
TNTNTTTTTTNTTNNTTTTTTTTTTGTTTTTTNTTTTNTTTTTNTTTTTT
TTTTTNTTNTGTTTTTTTNTTTTGTTGTTTTTTTGTTGTTTTGTTTTTTN
TGGGTTTGTTTGGTTTTTTTTTTNTGGTTTTTGCTTTTATGTTTTTTTTT
TTGTTGTTTTGTTGGGTCATTTTGCTTCTCTCTTTATTGATTTTTATTT

Query= MSMg01no536_l24.b1 MSMg01no536_l24.b1 CHROMAT_FILE:
MSMg01no536_l24.b1 PHD_FILE: MSMg01no536_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:57 2005
         (547 letters)



>mm_chr12_94563735_94564681
          Length = 947

 Score =  980 bits (507), Expect = 0.0
 Identities = 537/547 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccaaaacctttgggaagatatccaggtaaattttatgtgaagccaaatttcaattgcc 60
           ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 ttccaaaacttttgggaagatatccaggtaaattttatgtgaagacaaatttcaattgcc 260

                                                                       
Query: 61  atcattaatacccaattcctcatgtcattaagagtatagaaaacgctgagacaatgagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcattaatacccaattcctcatgtcattaagagtatagaaaacgctgagacaatgagtt 320

                                                                       
Query: 121 tttctttcctactgtttctatgaacataaagtaggacttcagtttgtcattcttgtccat 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tttctttcctactgtttctatgaacataaagtaggacttcagtttgtcatacttgtccat 380

                                                                       
Query: 181 atttatagtttggtaaagcagttgctaccgtaatctctgcaaagatttccaagaatttca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttatagtttggtaaagcagttgctaccgtaatctctgcaaagatttccaagaatttca 440

                                                                       
Query: 241 tgtaagcttctctatgagatatatcttatttactaatatgttataactaagttatattgc 300
           |||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaagcttctccatgagatccatcttatttactaatatgttataactaagttatattgc 500

                                                                       
Query: 301 tacataatttaggccattctagttattgacattttggtagatactacaagcaaataacac 360
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacataatttaggacattctagttattgacattttggtagatactacaagcaaataacac 560

                                                                       
Query: 361 ccccaaatttaatagatactaaaagcttttatagtaactactcagcttatgcactttgga 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccccaaatttaatagatactaatagcttttatagtaactactcagcttatgcactttgga 620

                                                                       
Query: 421 aaaatataaaaaatgtcatctggcaagaaaggctacattcatatgcttttcttatgaaaa 480
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 aaaatataaaaaatgtcatctggcaagaaaggctacattcatatgcgtttcttatgaaaa 680

                                                                       
Query: 481 gctgaaaacaggaatgaagttttgttcacataaagactaaagcaaacaaaggaatacgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 gctgaaaacaggaatgaagttttgttcacataaagactaaagcaaacaaaggaatactac 740

                  
Query: 541 tcagcta 547
           |||||||
Sbjct: 741 tcagcta 747


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)