Query= MSMg01no537_c08.b1 MSMg01no537_c08.b1 CHROMAT_FILE:
MSMg01no537_c08.b1 PHD_FILE: MSMg01no537_c08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:26 2005
(543 letters)
>mm_chr12_77158710_77159651
Length = 942
Score = 949 bits (491), Expect = 0.0
Identities = 530/543 (97%), Gaps = 1/543 (0%)
Strand = Plus / Plus
Query: 1 ttttttccagttagtttgaagatcaaatagaaaatattcaattaaaattgggcactcttt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttttccagttagtttaaagatcaaatagaaaatattcaattaaaattgggcactcttt 260
Query: 61 ctttttaattaccttagtaaattttgtataattaacataaaatgaagcgactgaagaact 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ctttttaattaccttagtaaattttgtataattaacataaaatgaagccactgaagaact 320
Query: 121 ctggatctggtaagctcccaaagaccactacttatgacaacccccacgaggagcaaatga 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 ctggatctggtaagctcccaaagaccactacttatgacgacccccacgaggagcaaatga 380
Query: 181 tagcgtgttatccagatccccgaccaccactcagttttataaacaaaattttatttaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcgtgttatccagatccccgaccaccactcagttttataaacaaaattttatttaagc 440
Query: 241 ccaaccttccacttacgcattacccacgagagattctagcttaggggacagagctggacg 300
||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||
Sbjct: 441 ccaaccttccacttacgcattacccacaagagattctagcttagggaacggagctggacg 500
Query: 301 gttgctttccagacaaggtggcccacaaagctaaaacactgatgggctgaccgtctgcag 360
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 501 gttgctttccagacaaggtggcccacaaagctaagacactgatgggctgactgtctgcag 560
Query: 361 aaaatgtttgttgaccctgccctagaatatgacagcagagttggggagattcagggtatt 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaatgttcgttgaccctgccctagaatatgacagcagagttggggagattcagggtatt 620
Query: 421 gtggaaggcgttcacttaacatactgttgacctgtcgttgaccgagaggctgtcctgggg 480
||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 gtggaaggcattcagttaacatactgttgacctgtcgttgacctagaggctgtcctgggg 680
Query: 481 gatttcatacatgaggaaaatgatgggtaggctgggttaagtctgggttaggcaccccac 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatttcatacatgaggaaaat-atgggtaggctgggttaagtctgggttaggcaccccac 739
Query: 541 tta 543
|||
Sbjct: 740 tta 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 942
Length adjustment: 10
Effective length of query: 533
Effective length of database: 932
Effective search space: 496756
Effective search space used: 496756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_c08.g1 MSMg01no537_c08.g1 CHROMAT_FILE:
MSMg01no537_c08.g1 PHD_FILE: MSMg01no537_c08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:27 2005
(462 letters)
>mm_chr12_77342505_77343366
Length = 862
Score = 571 bits (295), Expect = e-167
Identities = 314/321 (97%), Gaps = 2/321 (0%)
Strand = Plus / Minus
Query: 140 ttaaactcacaaagccctcacacactggcgttcttcctccagctccacctccccataacc 199
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 862 ttaaactcacaaagccctcacacactggcgttcttcttccagctccacctccccataacc 803
Query: 200 ttcccaaacaacaccaacaactggggaccaagtgctcagatgcctggacccaacagggtt 259
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 802 ttcccaaacaacaccaacaactggggaccaagtgttcagatgcctggacccaacagggtt 743
Query: 260 ggaggagcgttccttgttcaagctaccacactgctttcatggtgtgtgtgtgtgtgtgtg 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ggaggagcgttccttgttcaagctaccacactgctttcatggtgtgtgtgtgtgtgtgtg 683
Query: 320 tgtgtgtgtgtgtgt--tgtatgtaattgtatatggtgtacacacacatgtacctgtgag 377
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgtgtgtgtgtgtgtgctgtatgtaattgtatatggtgtacacacacatgtacctgtgag 623
Query: 378 cgtacaagcctgcgctaggctagaaaccagcaacctcagaattcctgactctgcctctac 437
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 catacaagcctgcgctaggctagaaaccagcaacctcagaattcctgactctgcctctac 563
Query: 438 tagccctggagctaaccactg 458
||||||||||| |||| ||||
Sbjct: 562 tagccctggagataacgactg 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
