Query= MSMg01no537_f18.b1 MSMg01no537_f18.b1 CHROMAT_FILE:
MSMg01no537_f18.b1 PHD_FILE: MSMg01no537_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:42 2005
(514 letters)
>mm_chr12_113781532_113782445
Length = 914
Score = 888 bits (459), Expect = 0.0
Identities = 459/459 (100%)
Strand = Plus / Minus
Query: 56 ttttctggaatgttcaccaagccctacccattagtgttgctttctgtccccttgaggact 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 ttttctggaatgttcaccaagccctacccattagtgttgctttctgtccccttgaggact 855
Query: 116 gaagttcatggccccacccacccatggccccacccacacccatgaccccacctactacat 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gaagttcatggccccacccacccatggccccacccacacccatgaccccacctactacat 795
Query: 176 ggtccccccacatagtcccacccacatccatgcccccacccaccccttggccccacccac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ggtccccccacatagtcccacccacatccatgcccccacccaccccttggccccacccac 735
Query: 236 acgtagccccatccacacccacggagggatagttacgcccagctcagggctgacatttta 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 acgtagccccatccacacccacggagggatagttacgcccagctcagggctgacatttta 675
Query: 296 aacgaatgagtgcgctggatctgatgtctggttcacaaagccgttctcaggacagttgaa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aacgaatgagtgcgctggatctgatgtctggttcacaaagccgttctcaggacagttgaa 615
Query: 356 gcctaggtccccttctttcccagaaactactaccagctctgtggctagtctcactgccgg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gcctaggtccccttctttcccagaaactactaccagctctgtggctagtctcactgccgg 555
Query: 416 ctctattacttctccagaaactgcctaggccaatgcagggctccactgggctccctgggg 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ctctattacttctccagaaactgcctaggccaatgcagggctccactgggctccctgggg 495
Query: 476 cttgaactgcctggaattccactggcgggatttttgtga 514
|||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cttgaactgcctggaattccactggcgggatttttgtga 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_f18.g1 MSMg01no537_f18.g1 CHROMAT_FILE:
MSMg01no537_f18.g1 PHD_FILE: MSMg01no537_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:43 2005
(565 letters)
>mm_chr12_113738916_113739880
Length = 965
Score = 1081 bits (559), Expect = 0.0
Identities = 563/565 (99%), Gaps = 2/565 (0%)
Strand = Plus / Plus
Query: 1 tttagggcccaactgacacacacacacacacacacaaaggctcctcacagtgagcctgga 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 203 tttagggcccaactgacacacacacacacacaca--aaggctcctcacagtgagcctgga 260
Query: 61 agcttgtgccttccacctggaaacacaccagccacagatggacactggcctcagacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcttgtgccttccacctggaaacacaccagccacagatggacactggcctcagacacag 320
Query: 121 gtcaggatcaccttgcttgaaaattggggacagcgttgcagcacaactgcagactagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcaggatcaccttgcttgaaaattggggacagcgttgcagcacaactgcagactagggc 380
Query: 181 cagcaacattgaacgcactcactgagatccagatgggcggggcctcttcggccatggggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagcaacattgaacgcactcactgagatccagatgggcggggcctcttcggccatggggg 440
Query: 241 cctcacccttgcaacacagagaaccatgccacctagaaagcctcaaagggaggagagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcacccttgcaacacagagaaccatgccacctagaaagcctcaaagggaggagagtgg 500
Query: 301 aactctcccatgacagccaagcagcccaggatggcctctcagagcaggggatggagccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactctcccatgacagccaagcagcccaggatggcctctcagagcaggggatggagccca 560
Query: 361 gcccagggtcccacattcctaccaggatcctctgcccgctgccttctccagtgccttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcccagggtcccacattcctaccaggatcctctgcccgctgccttctccagtgccttctg 620
Query: 421 agaaccttggctgagtgctataggatgggaagtcagccccttatggaaggggcagggacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaccttggctgagtgctataggatgggaagtcagccccttatggaaggggcagggacc 680
Query: 481 acgtgcgctggagcctgtggtggtgcaaaggctgctaacctggcggcgacggcacctcgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acgtgcgctggagcctgtggtggtgcaaaggctgctaacctggcggcgacggcacctcgg 740
Query: 541 ttctgcactcacacccccatccaca 565
|||||||||||||||||||||||||
Sbjct: 741 ttctgcactcacacccccatccaca 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
