NNNNTTACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTG
TTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATAT
TAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTG
GTGGTCTCTTTGTCTTATTGACAGTGTCTTTTGCCTTGCAGAAACTTTGG
AGTTTCATTAGGTCCCACTTGTCAATTCTCGATCTTACAGCACAAGCCAT
TGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTT
TCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGT
TCTTTGATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATC
GATTCACATTCTTCTACATGATAACAACTAGTTGTGCCAGCACCATTTGT
TGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAG
ATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATT
CCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTACCA
CAATTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAG
GTTCTTTTATCCTTGAGAAGAGTTTTGCTATCCTANGTT

NNNCCCCTATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAAGAAAATGCATAGTCTT
TTATTGATAATATTTCAAGGAAGGGTTTTATCTAAATGAACAGACTTGAA
AAATAAAACAGGCTGTGTAAAAGAAAAAGAACACTAAAGAAAAATTGAAT
CTAAATAGAAGTCAATCTCATAGAAGGTTAAATGAGTCACTATGTCATTC
AGTGTCTTATTCCTTTTTATAATTTCACATTGGAAAAAGTATTAAATGAA
GAAGTAGATTTTATATATTTTAAAAAGAGTGCATTTGTACCCTAATAAGA
AATTCACAGCTGAGAGTCAAATATTGGTGTTTCTAGGTGTGCTGGTTAAT
TCTCATCAATTCAACACAAGCTCTGATCATCTGGAAAAAGGAAACTTTTT
TTTTGTTTGAATTACCTCCATCAAATTGCACTGCTGGCAAGTTTGTGGGG
GTATTTCTTTGATTAATGACTAATGTGAGAGGACACAGCCCTCTGTGGGT
GGGATCACTTCTAAGCTTGTGGTCCTTGGTTGTAGAAGGAAGCAAAATGA
ACATTCCATGGGAAACAAATCAGTAAACAGAAGCTATTCTGTACAGCTTC
TGGTTCAGTCCCTGCTTCCAGTTCCTGCTTNAGTGTCATGCTGTGACTGC
TCTTANGATGAAATGTGATGTGGAAGTACAACTAAATAACTCTTCT

Query= MSMg01no537_l20.g1 MSMg01no537_l20.g1 CHROMAT_FILE:
MSMg01no537_l20.g1 PHD_FILE: MSMg01no537_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:11 2005
         (572 letters)



>mm_chr12_37786868_37787840
          Length = 973

 Score =  949 bits (491), Expect = 0.0
 Identities = 502/507 (99%), Gaps = 4/507 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caagaaaatgcatagtcttttattgataatatttcaaggaagggttttatctaaatgaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caagaaaatgcatagtcttttattgataatatttcaaggaagggttttatctaaatgaac 448

                                                                       
Query: 61  agacttg-aaaaataaaacaggctgtgtaaaagaaaaagaacactaaagaaaaattgaat 119
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agacttgaaaaaataaaacaggctgtgtaaaagaaaaagaacactaaagaaaaattgaat 388

                                                                       
Query: 120 ctaaatagaagtcaatctcatagaaggttaaatgagtcactatgtcattcagtgtcttat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ctaaatagaagtcaatctcatagaaggttaaatgagtcactatgtcattcagtgtcttat 328

                                                                       
Query: 180 tcctttttataatttcacattggaaaaagtattaaatgaagaagtagattttatatattt 239
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 327 tcctttttataatttcacattggaaaaagtattaaatgaagaagtatattttatatattt 268

                                                                       
Query: 240 taaaaagagtgcatttgtaccctaataagaaattcacagctgagagtcaaatattggtgt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 taaaaagagtgcatttgtaccctaataagaaattcacagctgagagtcaaatattggtgt 208

                                                                       
Query: 300 ttctaggtgtgctggttaattctcatcaattcaacacaagctctgatcatctggaaaaag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttctaggtgtgctggttaattctcatcaattcaacacaagctctgatcatctggaaaaag 148

                                                                       
Query: 360 gaaacttttttt---ttgtttgaattacctccatcaaattgcactgctggcaagtttgtg 416
           ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gaaactttttttttgttgtttgaattacctccatcaaattgcactgctggcaagtttgtg 88

                                                                       
Query: 417 ggggtatttctttgattaatgactaatgtgagaggacacagccctctgtgggtgggatca 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  ggggtatttctttgattaatgactaatgtgagaggacacagccctctgtgggtgggatca 28

                                      
Query: 477 cttctaagcttgtggtccttggttgta 503
           |||||||||||||||||||||||||||
Sbjct: 27  cttctaagcttgtggtccttggttgta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 973
Length adjustment: 10
Effective length of query: 562
Effective length of database: 963
Effective search space:   541206
Effective search space used:   541206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)