GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGGCCC
ATACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGCCAACATCA
AAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGA
CAAGGCTGCTCACTTTCTCCCTATCTTTTCAACATAGTACTTGAAGTATT
AGCCAGAGCATTTGGACAACAAAAGGAGATCAAGGGGATACAAATTGGAA
AAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAGTATATATA
AGTGACCCTAAAAATTCCACCAGAGAACTCCTAAACCTGATAAACAGCTT
CGGTGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTTC
TCTAAACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAACAACACCC
TTATCAATAGTCACAAATAATATAAAATGTCTCGGCGTGACTCTAAGGAC
GTGAAAGATCTGTGTGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAA
AGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGA
TCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAATCTATAGATTCAAT
GCAATCCCCATCAAAATTCCAATTCAATTCTTCAATGAATTAGAAGGAGC
AATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAATC
TTCTN

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTAATAATTAAAATGATCTACTGTAAAATAAAGGGCA
TAATGCATGCAATATTGGTCCATTTCCAAGAAAGGTAAGGAATTGATATA
TGAAAAGAATTTTACTGTTATACCATAGAGTCAACCTAAAATTTTGTGAT
GAATGGAAAATGAAAATTTTAAGTTTATTCATTTTATAGTGTTGTAATTT
TCTAATTTTTAATACTTACCTAGAATACTTTTTAATTTCTTGGAAAACTT
TATTTGAAGATTGAAGACAATACAGTTATCTTTAAAAAATATTATCCACT
AATAATTGTTTTTTAAAATAATTTTCACTTTTTTTCAAATCATCTTTATG
GTTTATATGATAGTTGTTCTTAAAAAAATAACAACAATAGCCTCATGAGT
CACACAGTAAAAAAATTAAATCATAGTACTGTGCTAGATGACTAATTAAT
CTTAAAATACAAAAGCAGCCATTAACAAGCAATTTTGAAGTTTGTAATCC
CTCTAGGGCTGTAAGATACTTGTAAAGTTTTTACTGCTGTAGGAGCAAAT
GGAAACTCTTTCCATGTGCAACATGTATTAAAATTTGCATACACAAATAT
TGAACATCTGCATAAGCTTCCTATAAACAACTGCAATCTGTTTTGTCTTA
TGCATGCCTATCATGAGTGTAGCATGTCATCTATATCTCTTCACATACAA
AATCATGAAC

Query= MSMg01no538_a18.g1 MSMg01no538_a18.g1 CHROMAT_FILE:
MSMg01no538_a18.g1 PHD_FILE: MSMg01no538_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:36 2005
         (678 letters)



>mm_chr12_94847285_94848363
          Length = 1079

 Score = 1305 bits (675), Expect = 0.0
 Identities = 678/679 (99%), Gaps = 1/679 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taataattaaaatgatctactgtaaaataaagggcataatgcatgcaatattggtccatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 taataattaaaatgatctactgtaaaataaagggcataatgcatgcaatattggtccatt 820

                                                                       
Query: 61  tccaagaaaggtaaggaattgatatatgaaaagaattttactgttataccatagagtcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tccaagaaaggtaaggaattgatatatgaaaagaattttactgttataccatagagtcaa 760

                                                                       
Query: 121 cctaaaattttgtgatgaatggaaaatgaaaattttaagtttattcattttatagtgttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 cctaaaattttgtgatgaatggaaaatgaaaattttaagtttattcattttatagtgttg 700

                                                                       
Query: 181 taattttctaatttttaatacttacctagaatactttttaatttcttggaaaactttatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 taattttctaatttttaatacttacctagaatactttttaatttcttggaaaactttatt 640

                                                                       
Query: 241 tgaagattgaagacaatacagttatctttaaaaaatattatccactaataattgtttttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tgaagattgaagacaatacagttatctttaaaaaatattatccactaataattgtttttt 580

                                                                       
Query: 301 aaaataattttcactttttttcaaatcatctttatggtttatatgatagttgttcttaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aaaataattttcactttttttcaaatcatctttatggtttatatgatagttgttcttaaa 520

                                                                       
Query: 361 aaaataacaacaatagcctcatgagtcacacagtaaaaaaa-ttaaatcatagtactgtg 419
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 519 aaaataacaacaatagcctcatgagtcacacagtaaaaaaaattaaatcatagtactgtg 460

                                                                       
Query: 420 ctagatgactaattaatcttaaaatacaaaagcagccattaacaagcaattttgaagttt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctagatgactaattaatcttaaaatacaaaagcagccattaacaagcaattttgaagttt 400

                                                                       
Query: 480 gtaatccctctagggctgtaagatacttgtaaagtttttactgctgtaggagcaaatgga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtaatccctctagggctgtaagatacttgtaaagtttttactgctgtaggagcaaatgga 340

                                                                       
Query: 540 aactctttccatgtgcaacatgtattaaaatttgcatacacaaatattgaacatctgcat 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aactctttccatgtgcaacatgtattaaaatttgcatacacaaatattgaacatctgcat 280

                                                                       
Query: 600 aagcttcctataaacaactgcaatctgttttgtcttatgcatgcctatcatgagtgtagc 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aagcttcctataaacaactgcaatctgttttgtcttatgcatgcctatcatgagtgtagc 220

                              
Query: 660 atgtcatctatatctcttc 678
           |||||||||||||||||||
Sbjct: 219 atgtcatctatatctcttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1079
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1069
Effective search space:   714092
Effective search space used:   714092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)