Query= MSMg01no539_e23.b1 MSMg01no539_e23.b1 CHROMAT_FILE:
MSMg01no539_e23.b1 PHD_FILE: MSMg01no539_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:13 2005
(597 letters)
>mm_chr12_118940367_118941366
Length = 1000
Score = 1094 bits (566), Expect = 0.0
Identities = 591/600 (98%), Gaps = 3/600 (0%)
Strand = Plus / Minus
Query: 1 aaaaagacaacttccggtctagcgcaggctgagcagggtgggtttttcctgtgtggacaa 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 800 aaaaagacaacttccggtctagcgcaggctgagcaggatgggtttttcctgtgtggacaa 741
Query: 61 tgatt-aaaaaaaagaagaagaagaagaagcaagtggggaagagagaaacaggggtggga 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgattaaaaaaaaagaagaagaagaagaagcaagtggggaagagagaaacaggggtggga 681
Query: 120 agcagttgtacagcttctgggtgttaaatactgggaagag--atatcagcaggacagtca 177
|||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||
Sbjct: 680 agcagttgtacagcttctgggtgttaaatactgggaagaggtataacagcagaacagtca 621
Query: 178 agggccattggactccgggttgtacggacggggctgggctgcagtcctcagtggggcgct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agggccattggactccgggttgtacggacggggctgggctgcagtcctcagtggggcgct 561
Query: 238 ccttgttacgcagatggacgtacagactagagggaagaaaggctattctcataatctgct 297
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccttgttacgcagagggacgtacagactagagggaagaaaggctattctcataatctgct 501
Query: 298 gctgcagtttgaaccactctgcttgtccccaaagacttgtgatccagttgtaggtctcat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctgcagtttgaaccactctgcttgtccccaaagacttgtgatccagttgtaggtctcat 441
Query: 358 tgattagagacagcagttgctctcacaattgagccaggaggggaaaaagtatcttcatga 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgattagagacagcagttgctctcacaattgagccaggaggggaaaaagtatcttcatga 381
Query: 418 tcaatgctacaacatttcacttaacagcatagatcagattggaaaccgttaggggtacaa 477
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 tcaatgctacaacatttcacttaacagcatagatcagattggaaaccgtcaggggtacaa 321
Query: 478 aacgtttaatactaatttgtcagcagctaccaataaaaattagcatcctggttccaagag 537
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 320 aacgtttaatactaatttgtcagcggctaccaataaaaattagcatcctggttccaagag 261
Query: 538 ccactgggtttaatactgtgacctctctgagctactgctggctcccatgattagcatcac 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ccactgggtttaatactgtgacctctctgagctactgctggctcccatgattagcatcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 1000
Length adjustment: 10
Effective length of query: 587
Effective length of database: 990
Effective search space: 581130
Effective search space used: 581130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_e23.g1 MSMg01no539_e23.g1 CHROMAT_FILE:
MSMg01no539_e23.g1 PHD_FILE: MSMg01no539_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:13 2005
(577 letters)
>mm_chr12_118765166_118766144
Length = 979
Score = 1077 bits (557), Expect = 0.0
Identities = 573/579 (98%), Gaps = 2/579 (0%)
Strand = Plus / Plus
Query: 1 agtagacagttccattgtttctggctttggtgaggcagaataccatagtgagaatctcaa 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 agtagacagttccattgtttctggctttggtgaggcagaatactatagtgagaatctcaa 260
Query: 61 aagttagagaaggctagcctaatggtggtagggtccagggaggggtgggggaagg--gat 118
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 261 aagttagagaaggctagcctaatggtggcagggtccagggaggggtgggggaaggaggat 320
Query: 119 gacagatgaaagacaggcagacagacagctggaggctacctctgatttgagactctttgt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacagatgaaagacaggcagacagacagctggaggctacctctgatttgagactctttgt 380
Query: 179 aagagcccatgtaatatccaacctatcattggatcaacccactgatgaaattattttcct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagcccatgtaatatccaacctatcattggatcaacccactgatgaaattattttcct 440
Query: 239 caggttccagtcatttctccatactgttgctagctgggagtaagacttcaaagccacttt 298
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 caggttccagtcatttctccatactgttgctagctgggagcaagacttcaaagccacttt 500
Query: 299 tgatgggaacacttcctatgcaaaccacgagggcagatgaccactggtgactgccaggta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgatgggaacacttcctatgcaaaccacgagggcagatgaccactggtgactgccaggta 560
Query: 359 agcagcttatcctgcagggagatgcagccagaacagaagtgcagcaggacgctgtgagat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcagcttatcctgcagggagatgcagccagaacagaagtgcagcaggacgctgtgagat 620
Query: 419 tttatcaggatgcttggtgcataatttgacatttgaaaacagcttattctgggatttgcc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttatcaggatgcttggtgcataatttgacatttgaaaacagcttattctgggatttgcc 680
Query: 479 atctcatctcttcagaccatgtaattgctggtaactgaagccataggaaatgaactgaga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atctcatctcttcagaccatgtaattgctggtaactgaagccataggaaatgaactgaga 740
Query: 539 aaaaacagggctaccgcactatcactagcagctttttat 577
| |||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaaacagggctaccgcactatcactagcagctttttat 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 979
Length adjustment: 10
Effective length of query: 567
Effective length of database: 969
Effective search space: 549423
Effective search space used: 549423
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
