ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCAAAAATTGACCCAATCAAGTTTGTTCATTCTTATAAATATTACTCAT
GACTTAGCTGAAGCGATAGAACAGGAAAAAAACTAATAAAGAAATAAATT
GAAAAGGAATATTTTACGTGATCCCTATCTCAGATGATTTGACTGTTTAT
TTAAGAGACTCTAGTGATTATACTAGATAAATTTCTAGCTAATAAATATT
TTTAGTAAAGTAGCAGAATATGATATCAACATGCAAAAAGTACATACAAG
TAAACCCAATGAAGGAAAGAAAAGGCCTCCAAAATTAAACCTTAAAGACG
CTGTGGTAGAAATGGTAAATGACACTAGGAAATGGAAAGACATCACATGT
TTACGTAAGAAAAGAATCAATAATGCAAAAAAAAGCAGTATTGCTGAAGG
TAGTGGTCATTATACATTCAAGACGATCTACATCAAATTTCTATTTATTT
TCTTTAGAAGACTAAAATAAATGTAAGCTTTCAGATTTTATAGAAACGTA
AAAGACCCAAAACACCCAAAGTAATTTTTAACAAAGGGAACAATATTTTA
CACATCACAGTATTGTATGAGCAAAACACAATTCACTCATACAAAATAAC
TATGAAGATCAATGAAATAGAAAAGAAGGTTCAATACTACATTCCTATGG
CTACATAAATTTTGGCAAAGTTGTAACAAACTTACATTGGCAAAAG

NNNCCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAAAATCATGAGCCCTTGGTGACA
GATGAAGGTTGTGTTCCACACCTGGCAGAACTTAAGCATAGGAAACCTCA
AATTCTGTCCCCTAATATTGCTACTCTCCATGAGCCAAGTGTGCAAACAC
ATGAGTTTATGGGGCCATACCTATTCAAACCACCACACAGAGAGATAAAA
GTTAGTGTTCAATTTGATTTTTATTCAGTCCAGGATACCAGCCAATGTTG
AGGACAACAGATAATGTGAGTCTCACTAACCCAACTAATTTAATAAACAT
AGTTCCTGCTGAGAAATTATATAGAGGCATTTCTCTAAGAGTATTTAGAT
CCCAAATACTAACTTGTATTTGACTACTAAAATTTACATTTAATCTTCTA
GGAATTAATATTATTAGAAAATTATTCATCGCCTTTGAGGAGAAATCAAA
TGTGAGCATCTACTACTTGTTCTTGGGGCAAAGGTTCAGGAAGTAGATAG
GTAAGGAATAGAAAACAATTATAGCAGTCATGCTGAGCACAGTTGTTCAG
ACTCTGCACCAAGGCTGACATACAGTGGATTTTTAGAGATTGTATGGAGA
CTGTGGAAATCCTGGACTTTTTATTTCATTTTTTAAGTCCAATCTTTAAC
CATATTGACTTATGGGCTTCTGTATTATCCCAGTAGTT

Query= MSMg01no540_n15.g1 MSMg01no540_n15.g1 CHROMAT_FILE:
MSMg01no540_n15.g1 PHD_FILE: MSMg01no540_n15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:20:16 2005
         (656 letters)



>mm_chr12_49819054_49820107
          Length = 1054

 Score = 1210 bits (626), Expect = 0.0
 Identities = 648/656 (98%), Gaps = 2/656 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaatcatgagcccttggtgacagatgaaggttgtgttccacacctggcagaacttaagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatcatgagcccttggtgacagatgaaggttgtgttccacacctggcagaacttaagc 260

                                                                       
Query: 61  ataggaaacctcaaattctgtcccctaatattgctactctccatgagccaagtgtgcaaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ataggaaacctcaaattctgtcccctaatattgctactctccatgagccaagcgtgcaaa 320

                                                                       
Query: 121 cacatgagtttatggggccatacctattcaaaccaccacacagagagataaaagttagtg 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 cacatgagtttatggggccatacctattcaaaccaccacatagagagataaaagttagtg 380

                                                                       
Query: 181 ttcaatttgatttttattcagtccaggataccagccaatgttgaggacaacagataatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaatttgatttttattcagtccaggataccagccaatgttgaggacaacagataatgt 440

                                                                       
Query: 241 gagtctcactaacccaactaatttaataaacatagttcctgctgagaaattatatagagg 300
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 gagtctcactaacccaactaatttaataaacatagttcctgctgaggaattatatagagg 500

                                                                       
Query: 301 catttctctaagagtatttagatcccaaatactaacttgtatttgactactaaaatttac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catttctctaagagtatttagatcccaaatactaacttgtatttgactactaaaatttac 560

                                                                       
Query: 361 atttaatcttctaggaattaatattattagaaaattattcatcgcctttgaggagaaatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttaatcttctaggaattaatattattagaaaattattcatcgcctttgaggagaaatc 620

                                                                       
Query: 421 aaatgtgagcatctactacttgttcttggggcaaaggttcaggaagtagataggtaagga 480
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatgagagcatctactacttgttcttggggcaaaggttcaggaagtagataggtaagga 680

                                                                       
Query: 481 atagaaaacaattatagcagtcatgctgagcacagttgttcagactctgcaccaaggctg 540
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagaaaacaattataacagtcatgctgagcacagttgttcagactctgcaccaaggctg 740

                                                                       
Query: 541 acatacagtggatttttagagattgtatggagactgtggaaatcctggactttttatttc 600
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 741 acatacagtggatttttagagattgtatggagactg--gaaatcctggactttttatttc 798

                                                                   
Query: 601 attttttaagtccaatctttaaccatattgacttatgggcttctgtattatcccag 656
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 799 attttttaagtccaatctttaaccacattgacttatgggcttctgtattatcccag 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1054
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1044
Effective search space:   674424
Effective search space used:   674424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)