Query= MSMg01no542_b10.b1 MSMg01no542_b10.b1 CHROMAT_FILE:
MSMg01no542_b10.b1 PHD_FILE: MSMg01no542_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:00 2005
(691 letters)
>mm_chr12_68251093_68252184
Length = 1092
Score = 1276 bits (660), Expect = 0.0
Identities = 681/688 (98%), Gaps = 1/688 (0%)
Strand = Plus / Plus
Query: 5 gaattctagactcttctgatttccttccttgactagacagtatagggtttggcaatggtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagactcttctgatttccttccttgactagacagtatagggtttggcaatggtt 264
Query: 65 gtcaacccacctgttccagcatcattgtgagaatgtgttggaaagaccattaggatcatc 124
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 gtcaactcacctgttccagcatcattgtgagaatgtgttggaaagaccatttggatcatc 324
Query: 125 acataaaatcacaattcctaagttaaacttgtaagccactgaatatggagtgggttggga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acataaaatcacaattcctaagttaaacttgtaagccactgaatatggagtgggttggga 384
Query: 185 aaaaggaatttacaacttatacactcagttttcagtttccgtcctgttttgttttttcga 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 aaaaggaatttacaacttatacactcagttttcagtttccgtcctgttttattttttcga 444
Query: 245 aacaaactaaaatctcttctgttactaaggcaatgtccactaccctagtcacctttcctt 304
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 445 aacaaactaaaatctcttctgttactaaggcaatgtacactaccgtagtcacctttcctt 504
Query: 305 gtatttagtaaaatcacttttccatagagatgtagtgataacattaacttgtttagcctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtatttagtaaaatcacttttccatagagatgtagtgataacattaacttgtttagcctt 564
Query: 365 acaataaacccaatgaagtccattactacttttcgcttaaaacatgcaaaacagttctgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acaataaacccaatgaagtccattactacttttcgcttaaaacatgcaaaacagttctgg 624
Query: 425 ggaaagatacatgttttcccatgttcacacaaaacgatgagcttttttaccaagctacta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggaaagatacatgttttcccatgttcacacaaaacgatgagcttttttaccaagctacta 684
Query: 485 tgactttatatactaaaatttataacattctaaaatggatggatgaatcattgggcagac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgactttatatactaaaatttataacattctaaaatggatggatgaatcattgggcagac 744
Query: 545 ttagagcaaatttaaaactgctgtatcattcacagctttaaaaaaaatcattgctatata 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttagagcaaatttaaaactgctgtatcattcacagctttaaaaaaaatcattgctatata 804
Query: 605 tcagaaatttttatataatttactagactgat-aaagtcacattaaaccagccaattaaa 663
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 805 tcagaaatttttatataatttactagactgatgaaaatcacattaaaccagccaattaaa 864
Query: 664 tatttaaattaggaacagcgagatagat 691
||||||||||||||||||||||||||||
Sbjct: 865 tatttaaattaggaacagcgagatagat 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1092
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1082
Effective search space: 736842
Effective search space used: 736842
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_b10.g1 MSMg01no542_b10.g1 CHROMAT_FILE:
MSMg01no542_b10.g1 PHD_FILE: MSMg01no542_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:00 2005
(644 letters)
>mm_chr12_68445018_68446061
Length = 1044
Score = 1207 bits (624), Expect = 0.0
Identities = 639/644 (99%)
Strand = Plus / Minus
Query: 1 taaagtgtaagtacaaaagtctaggtaggattaaggtaattatgcagacatgaaaagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 taaagtgtaagtacaaaagtctaggtaggattaaggtaattatgcagacatgaaaagtca 785
Query: 61 cattgaatacaaagatttattgcttaagcctaatcctcaggataatagaacgctagtgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cattgaatacaaagatttattgcttaagcctaatcctcaggataatagaacgctagtgca 725
Query: 121 attcattgaaataatgaagggtccattccgtagaccttatgtaaagcaatgtttaaagcc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 724 attcattgaaataatgaagggtccattccatagaccttatgtaaagcaatgtttaaagcc 665
Query: 181 gcagcgaagctaaatagtgtgcttgacacaacctgaatattaaataccatttctactttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gcagcgaagctaaatagtgtgcttgacacaacctgaatattaaataccatttctactttt 605
Query: 241 aaagatatccctttgaatacaagcttaatatcttcagattataaattcttaagtgctgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aaagatatccctttgaatacaagcttaatatcttcagattataaattcttaagtgctgat 545
Query: 301 gaattgcttcattgttgaaataaatttattcaataaattcccccaatgaacaacagccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaattgcttcattgttgaaataaatttattcaataaattcccccaatgaacaacagccaa 485
Query: 361 gtgaatatgaaagttggtgctgctgtttctccacaatgcatttctaggttcagtcatgaa 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 484 gtgaatatgaaagttggtgctgctgtttctccacaatgcgtttctaggttcagtcatgaa 425
Query: 421 cttcctattattcaagaacatccttgaatacatatgaagaatcacagaccaaaaaaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cttcctattattcaagaacatccttgaatacatatgaagaatcacagaccaaaaaaagga 365
Query: 481 aacaagttcttgcttaaatctgagtacaggtacatatgtatttggtagttaaggttaatt 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 364 aacaagttcttgcttaaatctgagtacagatacatatgtatttggtagttaaggttaatt 305
Query: 541 ctcactaattaaatgaacttgtttttcttattgaggacctggatttaattaccagtatcc 600
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctcactaattaaatgaacttgttgttcttattgaggacctggatttaattaccagtatcc 245
Query: 601 aaatggtggcacacagcagtctgttgccctcttccttttgtggc 644
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acatggtggcacacagcagtctgttgccctcttccttttgtggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
