NNNNGGTTTNNNNNNNNNNNCCCCTTTTTCCCCTCCCTTTTTTCCAGAGG
ATCCGCNGGAATTCCCAANGAAATAACTTTTAGATTAGATCACATAAGGC
TTCCTTTGAAAATTTACCTAAAGAANGTGGATAAAAATATTAAATGCTCC
CAATTTTTTTACTCCCTGATTAAAAGATTCCNTTTTCAATAATTTGAATT
GCANAAAAACTTTTCTGGGGTAAAATTTNNATGGGATATTATGGCCCCAA
GAAAAATTATTTCCAAAAAAANNNNGGGGTGGGCCCTGGAAAAAAAACCC
CNGGGGNTTTCTATTAACGGAGNGNCGTCCGCCCCCTATAATAGGGCGTG
AGCTCAATAAANNATAATAANNNAANNNNNTNNNNNNNNNNGGGGGGGGG
GGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGTGGG
GGGGGGGGGGGGGCTTGGAGGGGGTGGGGGGGGGGTGGGAGGGGGGGGGA
GGGGGAAGGGGGGGGGAGGGGGGGGGGGNNNTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGNGGGGGGGGGGGGNGTTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGGNGGGGGGGGGGGNNNNNNNTTTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNGGGGGGGGGGG
GGGGGGGGGA

NACAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGCATAGCGACACACTATTGGCT
TATTCAAACATCAGCAGAAAATTACATGTACGTGCAGGGTGTCAGAGTTC
TGCGAGTTGTTGACTCAGTTCAGATAGCCCAGTTATGTCCTCACATTCCT
CTTTATCTTAATGGACAAGATGTTCCCAAGAATGTTTTAACTACGGGGCA
TACCCGGGTTTCTTTTTCTTTGTTCTCAGCCCCAGGCAGCCTCTAGGCTC
ACAAACAACCAGCAATTTCTGAGTACTTTATATGACTTACAGGTCGTGAA
ATTTCATCTTTCTTTCATGCCCAGGGTAAACATGAACTCAGTGCATACTT
GCTGAAGGGAAGGTATAGGGCTCTTGAGGCTGGGTGATATGATCCCTGGA
GGTAGGGATAGGATGGTCTCATGCTAGGCACATTGGGACACTGATGTCTC
GAGGTGAGAGACAGAATGAACCCCTAAGTGGTGGCAGCTGGGAGGCAAGA
GACCCAATCTCAGTGCTGCTGTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT
TTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
TTCTTTCTTT

Query= MSMg01no542_j12.g1 MSMg01no542_j12.g1 CHROMAT_FILE:
MSMg01no542_j12.g1 PHD_FILE: MSMg01no542_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:41 2005
         (683 letters)



>mm_chr12_25354505_25355587
          Length = 1083

 Score = 1187 bits (614), Expect = 0.0
 Identities = 639/648 (98%), Gaps = 3/648 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcatagcgacacactattggcttattcaaacatcagcag-aaaattacatgtacgtgca 59
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 985 agcatagcgacacactattggcttattcaaacatcagcagaaaaattacatgtacgtgca 926

                                                                       
Query: 60  gggtgtcagagttctgcgagttgttgactcagttcagatagcccagttatgtcctcacat 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 gggtgtcagagttctgcgagttgttgactcagttcagatagcccagttatgtcctcacat 866

                                                                       
Query: 120 tcctctttatcttaatggacaagatgttcccaagaatgttttaactacggggcatacccg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tcctctttatcttaatggacaagatgttcccaagaatgttttaactacggggcatacccg 806

                                                                       
Query: 180 ggtttctttttctttgttctcagccccaggcagcctctaggctcacaaacaaccagcaat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggtttctttttctttgttctcagccccaggcagcctctaggctcacaaacaaccagcaat 746

                                                                       
Query: 240 ttctgagtactttatatgacttacaggtcgtgaaatttcatctttctttcatgcccaggg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttctgagtactttatatgacttacaggtcgtgaaatttcatctttctttcatgcccaggg 686

                                                                       
Query: 300 taaacatgaactcagtgcatacttgctgaagggaaggtatagggctcttgaggctgggtg 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaacatgaactcagtgcatacttgctgaagggaaggtatagggctcttgaggctgggtg 626

                                                                       
Query: 360 atatgatccctggaggtagggataggatggtctcatgctaggcacattgggacactgatg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atatgatccctggaggtagggataggatggtctcatgctaggcacattgggacactgatg 566

                                                                       
Query: 420 tctcgaggtgagagacagaatgaacccctaagtggtggcagctgggaggcaagagaccca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctcgaggtgagagacagaatgaacccctaagtggtggcagctgggaggcaagagaccca 506

                                                                       
Query: 480 atctcagtgctgctgtttctttctttctttctttctttctttctttctttctttctttct 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atctcagtgctgctgtttctttctttctttctttctttctttctttctttctttctttct 446

                                                                       
Query: 540 ttctttctttctttctttctttctttctttctttctttctttctttctttctttctttct 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 ttctttctttctttctttctttctttctttctttctttctttctttctttctttctctct 386

                                                           
Query: 600 ttctttctttctttctttctttctttctctctctctctctctctttct 647
            ||| ||| ||||||| ||| |||  ||||||||||||||||||||||
Sbjct: 385 ctctctctctctttctctctctct--ctctctctctctctctctttct 340


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 228
Number of extensions: 46
Number of successful extensions: 46
Number of sequences better than 10.0: 1
Number of HSP's gapped: 43
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1083
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1073
Effective search space:   722129
Effective search space used:   722129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)