CCCTTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTAGGCCTGTGGGACTGGTTTGTGTGAGGAATATGAGACAT
TTCAGCTGCTTGATACAAAATCCCTAACATGCTGCAACCAGAAATTAATG
GACCATATGGCCAGGACCTTGAAAGATAAAAGTGCTGGCAAAACAACACA
GTGAAAGCATTGCTTAAGTGGTTTAAGAGTAGGGTAAATACACTATAGAG
ACATGACCTTGGGGCCATTCATATTTGATTCTGGTCAAAGTACTTTGGAG
CATATATGATGACATCGTGAGTAAGATACCAGACACTGAGCGCAGTATTT
GATGTTTGCACAGCTGGTTATCGTTCTTACTCCGGTCTGATCTTTCCTTG
CTATAGCTCAATGATCACTTTTTCTAATGGGAACATGTATCATGTACCAT
TGTCTATGTGAACTGTGCAATTATTTTTAAATCTAGGAGGTCACAGTTAA
TAAATTGCAATGAGTCTCAGAAAAGGACTTTAAAACTTTTAGGAACTGCT
GAAGAGTAAGGTAGCTTAATGTTGGTCTGAATGCATTCTATATTAGGAGA
TGATGGAAAGCCTGCAGAGGATAGGGTGGGAGAAGTGTATGATTCAGAGA
TACTTCAAATGTCAAGATGACAAGGGATGAAGTTTTCATGGTAAAGTCTT
TTTCATAAACTTGATGGAATCTAAAATCACTTGTCAGAAGGGN

AAAACCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAACCCTGGACCTACAG
GATGGAAAATTGAAAGCAATAACCAAAATGATGCTGTGATGTCTATGTGT
GTACCATAGCATGCACATGTGTATACACACACAGGCATACACACTATAAA
TAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAGATA
AATAAATAAATAAATGATAGATAGGTAGATACATAGAAACATAAATAGAT
AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATACATAGATAC
ATAGATACATAGATACATAGATACATAGATACATAGATACATAGATAGAA
AGAATGTAGAATTTTTTAACATTTGGAAAGTAACATGAAGACTTTAAAAA
ATAGCAAGACTCAATGTTTAGATCTAACTGGCTTATAATTAACTGCACTG
GCCTTCAATTCTATACATCAAGTGAAGACCATATTGAAATCACACAGCCA
TATATGCTCCGCCTTTTGCCAAAATACCTATCATGCTGATTCCAATTTCT
CTTTGTATTCTGTTTATTCATACTGTTGGATAGTATGTTGACAGAAGGAA
TTCTTATTTATGGTGTTGGCAAATACTTGACAAAATATGTATTTTGTGAG
TGATTATTTAAACCTGATATATTAATCATAATAAGACAGACTCACATTGC

Query= MSMg01no543_c06.g1 MSMg01no543_c06.g1 CHROMAT_FILE:
MSMg01no543_c06.g1 PHD_FILE: MSMg01no543_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:24 2005
         (667 letters)



>mm_chr12_38839840_38840906
          Length = 1067

 Score =  919 bits (475), Expect = 0.0
 Identities = 583/667 (87%), Gaps = 76/667 (11%)
 Strand = Plus / Plus

                                                                       
Query: 1   caaccctggacctacaggatggaaaattgaaagcaataaccaaaatgatgctgtgatgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaccctggacctacaggatggaaaattgaaagcaataaccaaaatgatgctgtgatgtc 260

                                                                       
Query: 61  tatgtgtgtaccatagcatgcacatgtgtatacacacacaggcatacacactataaataa 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct: 261 tatgtatgtaccatagcatgcacatgtgtatacacacacaggcatacacact-------- 312

                                                                       
Query: 121 ataaataaataaataaataaataaataaataaataaataaatagataaataaataaataa 180
                                   ||||||||||||||||||||||||||||||||||||
Sbjct: 313 ------------------------ataaataaataaataaatagataaataaataaataa 348

                                                                       
Query: 181 atgatagataggtagatacatagaaacataaatagatagatagatagatagatagataga 240
           |||||||||||||||||||            ||||||| ||||| | |||||||||||||
Sbjct: 349 atgatagataggtagatac------------atagatacatagaaacatagatagataga 396

                                                                       
Query: 241 tagatagatagatagatacatagatacatagatacatagatacatagatacatagataca 300
           |||||||||||||||||||                             |   ||||||||
Sbjct: 397 tagatagatagatagatac-----------------------------t---tagataca 424

                                                                       
Query: 301 tagatacatagatagaaagaatgtagaattttttaacatttggaaagtaacatgaagact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tagatacatagatagaaagaatgtagaattttttaacatttggaaagtaacatgaagact 484

                                                                       
Query: 361 ttaaaaaatagcaagactcaatgtttagatctaactggcttataattaactgcactggcc 420
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 485 ttaaaaaatatcaagactcaatgtttagatctaactggcttataattaactgcaccggcc 544

                                                                       
Query: 421 ttcaattctatacatcaagtgaagaccatattgaaatcacacagccatatatgctccgcc 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 545 ttcaattctatacatcaagtgaagaccatattgaaatcacacagccatatatgctctgcc 604

                                                                       
Query: 481 ttttgccaaaatacctatcatgctgattccaatttctctttgtattctgtttattcatac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttttgccaaaatacctatcatgctgattccaatttctctttgtattctgtttattcatac 664

                                                                       
Query: 541 tgttggatagtatgttgacagaaggaattcttatttatggtgttggcaaatacttgacaa 600
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgtcggatagtatgttgacagaaggaattcttatttatggtgttggcaaatacttgacaa 724

                                                                       
Query: 601 aatatgtattttgtgagtgattatttaaacctgatatattaatcataataagacagactc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aatatgtattttgtgagtgattatttaaacctgatatattaatcataataagacagactc 784

                  
Query: 661 acattgc 667
           |||||||
Sbjct: 785 acattgc 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)