CCTTGCCTCGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCGCGGAATTCTCAACTGATGAAACTGGAATGGTTGAGAAGCTCC
TAAAGAAATGTTCAACATCATTAGTCATCAGGAAAATGCAATTCAAAACA
ATCTTGCGATCCCACCTCATACCAGTAAGAATGGCTAAGATAAAAAACTT
GGATGACATCAGATGCTAACGAGGATTTTGAGAAAGAGGAACACTCCTCC
ATTGTTGATGGGATTGCAAGCTGGTACAATCACTCTGTAAATCAGTCTGG
TAGTTCCTCAGAGAATTGGACATAGGTTTTACCTTGAGGACCCAGCTATA
CCACTTCCTGAATGTATATGCAAAAAGGAACTCCCACCTTTTTAACAAGG
GACAATTTGCTCCCCCCCTATTGTTAAAAAACACCCCTTTATTTTAAATA
AGCCCCTAAAAAGGGGGAAAAAACCCCAAATGTCTCTTTTATCAAAGAGG
GTGTGGGAAAACAAAAGAAAAATTTTGGAAAATTTTAATAATCCCTCCTT
TTTTTTTAAAAAAAGGGGGTTTCTCTTAAAATTTTTTTTTTGGGGCCCCC
TCGTGGGGGGGGGGGTTCCCTTAAAAAAAAATCCCCCCCCCCCCCTATTT
GGTGGGGAAAAAACTCTCCACATAATAAAAATCGTAAATTATTTCCATCC
ACCCTGCTTTGTTTAATAATCTTTATTTGCGGTTTTC

NGTGGTCGATGCTGGGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGATGCAGGTACATAGGA
AGTCTGGTGTTATTGAAGATGCAGTCATGGTGATGAGAATGGAGGATGTC
TGTGTTTAGATCATCTGCTCCCTTTTATAAAACCCAGGACCTCAGTTGAA
GAAATCACATTACACTTTTCTTTTTACATTAATATAGACCTTCACAGGCA
TGCCCAGAAATCAGCAATCCCTCACAGGTTTGCATAGAGTCCTGACTCCT
GGGTGATTCTACATCCTTCCAAATTGACGATTAATACTAACCGTTACGAT
TAGGTTTTAAGGTTCTAAAGATAAGATAGATACTATGGAATTTACTTTCA
AAGATGAACATTTTCATGATTCTCAATCAAGGGAGGGGGAAGGAAGGCAT
TGCTTTAAAAACACAGTGTTGAAATATTAATATAGGGGGTGTTTATGTGG
AATACCTGTGAAAGGCAAGAAGAGGAAGAGAGGGTAAGGCAAAAAAGTTC
TTATTAAGCAGCTGCATTCTGACACAGACCTTTGCTGAATTGAGGGCAGC
TCACACTTGGATATACTTTCACTTCTTTTCCTATTCGTAAGAAGTACTTT
CTTTTTCAGCTATATCAAAATAGTACTACTTCCAATCCAAGGCAGGCACC
TGCTTTAATTTAAACGGAACACGCTTTGACAAGAAGT

Query= MSMg01no544_e16.g1 MSMg01no544_e16.g1 CHROMAT_FILE:
MSMg01no544_e16.g1 PHD_FILE: MSMg01no544_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:54 2005
         (624 letters)



>mm_chr12_98206232_98207255
          Length = 1024

 Score = 1054 bits (545), Expect = 0.0
 Identities = 554/557 (99%)
 Strand = Plus / Minus

                                                                        
Query: 68   gtctgtgtttagatcatctgctcccttttataaaacccaggacctcagttgaagaaatca 127
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 gtctgtgtttagatcatctgttcccttttataaaacccaggacctcagttgaagaaatca 965

                                                                        
Query: 128  cattacacttttctttttacattaatatagaccttcacaggcatgcccagaaatcagcaa 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  cattacacttttctttttacattaatatagaccttcacaggcatgcccagaaatcagcaa 905

                                                                        
Query: 188  tccctcacaggtttgcatagagtcctgactcctgggtgattctacatccttccaaattga 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  tccctcacaggtttgcatagagtcctgactcctgggtgattctacatccttccaaattga 845

                                                                        
Query: 248  cgattaatactaaccgttacgattaggttttaaggttctaaagataagatagatactatg 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844  cgattaatactaaccgttacgattaggttttaaggttctaaagataagatagatactatg 785

                                                                        
Query: 308  gaatttactttcaaagatgaacattttcatgattctcaatcaagggagggggaaggaagg 367
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 784  gaatttactttcaaagatgaacattttcatgattctcaatcaagggagggggaaagaagg 725

                                                                        
Query: 368  cattgctttaaaaacacagtgttgaaatattaatatagggggtgtttatgtggaatacct 427
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724  cattgctttaaaaacacagtgttgaaatattaatatagggggtgtttatgtggaatacct 665

                                                                        
Query: 428  gtgaaaggcaagaagaggaagagagggtaaggcaaaaaagttcttattaagcagctgcat 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664  gtgaaaggcaagaagaggaagagagggtaaggcaaaaaagttcttattaagcagctgcat 605

                                                                        
Query: 488  tctgacacagacctttgctgaattgagggcagctcacacttggatatactttcacttctt 547
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 604  tctgacacagacctttgctgaattgagggcagctcacacttggatacactttcacttctt 545

                                                                        
Query: 548  ttcctattcgtaagaagtactttctttttcagctatatcaaaatagtactacttccaatc 607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544  ttcctattcgtaagaagtactttctttttcagctatatcaaaatagtactacttccaatc 485

                             
Query: 608  caaggcaggcacctgct 624
            |||||||||||||||||
Sbjct: 484  caaggcaggcacctgct 468


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)