CGGGCACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCTCCTGTCTAAAGGAAATGCAGGGACAAAGAGCGGAGC
AGAAACTGAAGGAAAGGCCATCCAGAGACTGTCCCACCTCTGGATGCGTC
CCATCTCCAGACAACAAACCCAGCACTATTGATGATGCCAAGAAATGCTT
AATAGGATCCTGGTATAGATGTCCCCTGAGAGCATCTGCCAGAGCTTGAC
CAATACAGATACCTATATATATGCAGCCAAACATTGAACTGAGCGTGGGA
ATCCCGATAGAGAATTTAGGGCAGGACTTTAGGAGCTGAAGGGGTTTGCA
ACCAAGCAGCGCCTCCCCAATCTCCAGAGACAAAACCAGCAACCAAAGAG
TACACATGGGAGGGAGGGATCCATGGCTCCAGCTGCATATGTAACAGAGG
ACAGCCTTATCAAACATCATTGGGAGGGGAGCTCCTTGGTCCAATGGAGG
CTCAATGACCCAGGGTAGGGAAATGCTAAAGCGCTGAGGCAGGAGTGGGT
AGGAGGGTGGGGAAGCACCCTCATAGAGGTAGGGGGAAGGAGATAGGGGA
CTTGTGGAGGTGAATCTGGAAAGGCTGATAACTTGAAATGTAAATAAATA
AAATAACCAATAAAAATGAAAAAATGCAAATTGAAAACTCATCTAGGGAA
ATACTAGCAAGATCAAAGCTTTTCTAAATCTTCCTTGGTCTTTTCTTT

AAGGGCCGATGATGGTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCATAGAGACACACTTTTGG
CTTATTCAAACATCAGCAGAAAATTACATGTACGTGGAGGGTGTCAGAGT
TCTGAGTTGTTGACTCAGTTTAGATAGCCTTGTTATGTCCTCACATTCCT
CTTTATCTTATGGTCAAGCTGTTCCCAGGAATGTTTTAACCAAGGGGCAT
ATTCAGGTTTGTTTTTCTTTTTTTCTCAGCCCCAGGCAGCCTCTAGGCTC
ACAAACAACCAGCAATTTCTGAGTACTTTATATGACTTACAGGACTTGAA
ATTTCATCTTTTTTTTCAGATGCAGATCTATCCAGCCACCATCAGTTTGC
ATTACTTCAGTGGATTTTGAAAACCAACAGAAGCACCTGCTTGCCATGAC
CTCTGTTCAGTAGAACCCGAGTCTGAGTAAACTGGGTGGAAAACTAAAAT
GCATCACATTGATTAGTCCTCCTGTGGTAATATATATATCACCACAAGGC
CAAATTTAATCTTTCAGAAGCAGCACATGGATGATGCTCTCTCCAATACA
AAACTCTTAATGTATGAAAGCAATCTCATGAAAGCATTGGGAACTTAATC
GATGACAAAGAGTGACTTTGGCCCTTAATATATTAATTTATGCTAATTCA
CATGTCAATATTTAAGTGAAATAACCTAATAGGATAAGATA

Query= MSMg01no544_l11.g1 MSMg01no544_l11.g1 CHROMAT_FILE:
MSMg01no544_l11.g1 PHD_FILE: MSMg01no544_l11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:28 2005
         (617 letters)



>mm_chr12_62225684_62226700
          Length = 1017

 Score =  920 bits (476), Expect = 0.0
 Identities = 606/704 (86%), Gaps = 88/704 (12%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcatagagacacacttttggcttattcaaacatcagcag-aaaattacatgtacgtgga 59
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |
Sbjct: 950 agcatagagacacacttttggcttattcaaacatcagcagaaaaattacatgtacatgca 891

                                                                       
Query: 60  gggtgtcagagttc--tgagttgttgactcagtttagatagccttgttatgtcctcacat 117
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 890 gggtgtcagagttctgtgagttgttgactcagtttagatagccttgttatgtccttacat 831

                                                                       
Query: 118 tcctctttatcttatggtcaagctgttcccaggaatgttttaaccaaggggcatattcag 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 830 tcctctttatcttatggtcaagctgttcccaggaatgttttaaccaaggggcatactcag 771

                                                                       
Query: 178 gtttgtttttc-tttttttctcagccccaggcagcctctaggctcacaaacaaccagcaa 236
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gtttgtttttcttttttttctcagccccaggcagcctctaggctcacaaacaaccagcaa 711

                                                                       
Query: 237 tttctgagtactttatatgacttacaggacttgaaatttcatcttttttttcagatgcag 296
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 710 tttctgagtactttatatgacttacagaacttgaaatttcatcttttttttcagatgcag 651

                                                                       
Query: 297 atctatccagccaccatcagtttgcattacttcagtggattttgaaaaccaacagaagca 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 atctatccagccaccatcagtttgcattacttcagtggattttgaaaaccaacagaagca 591

                                                                       
Query: 357 cctgcttgccatgacctctgttcagtagaacccgagtctgagtaaactgggtggaaaact 416
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 590 cctgcttgccatgacctctgttcagtagaacccgagtctgaataaactgggtggaaaact 531

                                                                       
Query: 417 aaaatgcatcacattgattagtcctcctgtggta-------------------------- 450
           ||||||||||||||||||||||||||||||||||                          
Sbjct: 530 aaaatgcatcacattgattagtcctcctgtggtaatatatatatatatatatatatatat 471

                                                                       
Query: 451 --------------------------------------------------------atat 454
                                                                   ||||
Sbjct: 470 atatatatatatatatatatatatatatacacatatatatatatatatatatatatatat 411

                                                                       
Query: 455 atatatcaccacaaggccaaatttaatctttcagaagcagcacatggatgatgctctctc 514
           ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 410 atatatcaccacaagtccaaatttaatctttcaggagcagcacatggatgatgctctctc 351

                                                                       
Query: 515 caatacaaaactcttaatgtatgaaagcaatctcatgaaagcattgggaacttaatcga- 573
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 350 caatacaaaactcttaatgtatgaaagcaatctcatgaaagcattgggaacttaatc-at 292

                                                       
Query: 574 tgacaaagagtgactttggcccttaatatattaatttatgctaa 617
           ||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 291 tgacaaagagtgacttttgcccttaatacattaatttatgctaa 248


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)