Query= MSMg01no546_e19.b1 MSMg01no546_e19.b1 CHROMAT_FILE:
MSMg01no546_e19.b1 PHD_FILE: MSMg01no546_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:33 2005
(668 letters)
>mm_chr12_8368772_8369839
Length = 1068
Score = 1073 bits (555), Expect = 0.0
Identities = 598/617 (96%), Gaps = 9/617 (1%)
Strand = Plus / Minus
Query: 5 gaattctttgttgttgcggtatggcctggtgtatagccaaggctggctcacaatcctcct 64
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 616 gaattctttgttgttgcggtatggcctggcgtatagccaaggctggctcacaatcctcct 557
Query: 65 gcttcagcgttgtgaatgggagggattacaggtgtgatgttttgaaagtggcatcaaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gcttcagcgttgtgaatgggagggattacaggtgtgatgttttgaaagtggcatcaaatt 497
Query: 125 atctctggaatgaagtagactataatggagggatgttctaaatgcctgggcttgcaaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atctctggaatgaagtagactataatggagggatgttctaaatgcctgggcttgcaaaag 437
Query: 185 cgtggttcttgtctaggctctcagatccttccaacttctcattctgcaggacttttttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cgtggttcttgtctaggctctcagatccttccaacttctcattctgcaggacttttttct 377
Query: 245 ttttgatccaatgattgtttcaggctgaacttatttctttatatcaaatattacttaa-- 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttttgatccaatgattgtttcaggctgaacttatttctttatatcaaatattacttaaaa 317
Query: 303 ------aaacaaacaaacaaacaataccctggaaattccatgattctaaaagcacaggct 356
||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 316 acaaacaaacaaacaaacaaacaatactctggaaactccatgattctaaaagcacaggct 257
Query: 357 tttaaagaaaaatgagataaatgtatcaaaattaaacatattagactgagcataagtgac 416
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 256 tttaaagaaaaatgagataaatgtatcaaaattaaacatattggactgagcataagtgac 197
Query: 417 tattgagtgcccagccctaaacaggacaccaacatcacccctccaggaactcaaggacca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tattgagtgcccagccctaaacaggacaccaacatcacccctccaggaactcaaggacca 137
Query: 477 ttgcaaaaggggtaaaaaagccagaggacaggaaagagcgctgtggaatgctgtcatcca 536
|||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 136 ttgcaaaagggggcaaaaagccagaggacaggaaagagcgctgtgaaacgctgtcatcca 77
Query: 537 gatgtgacacatgcatcacaggcaagagcaaaagcagctgtcgttccctacacaagactg 596
|||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||
Sbjct: 76 gatgtgacacatgcatca-aagcaagagcaaaagcagctttcgttccctacacaagactg 18
Query: 597 agccatcagcattcggt 613
|||||||||||||||||
Sbjct: 17 agccatcagcattcggt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_e19.g1 MSMg01no546_e19.g1 CHROMAT_FILE:
MSMg01no546_e19.g1 PHD_FILE: MSMg01no546_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:33 2005
(619 letters)
>mm_chr12_8197468_8198485
Length = 1018
Score = 526 bits (272), Expect = e-153
Identities = 308/320 (96%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 4 ctaattaacacagcatgggtgaagacaaaacatctggagtcacagtgagattgtatgtgg 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctaattgacacagcatgggtgaagacaaaacatctggagtcacagtgagattgtatgtgg 263
Query: 64 tgaattatgttgaacaccttaaaatactagtttattatctccctaaaatatacttacaaa 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaattatgttgaaaaccttaaaatactagtttattatctccctaaaatatacttacaaa 323
Query: 124 tgtacatacatgttaatatgcatgtatattgtgcacttttatatcagaggcatctaaatg 183
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 324 tgtacatacatgttaatatgcatatatattgtgcacttttatggcagaggcatctaaatg 383
Query: 184 ttgctatttggcagatttttgttcaattctttttaacacctctgtaaagacaagacaaaa 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 ttgctatttggcagatttttgttcaattctttttaacacctctgtagagacaagacaaaa 443
Query: 244 aaaaccaactttttactgataattttcaagtttcacaagtgaaggtttttggttggtttt 303
| ||| ||||||||||||||||||| ||||||||||| ||||||||||||| || |||||
Sbjct: 444 agaac-aactttttactgataatttccaagtttcacaggtgaaggtttttgttttgtttt 502
Query: 304 tgtttgtttgttttgttttg 323
||||||||||||||||||||
Sbjct: 503 tgtttgtttgttttgttttg 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space: 613872
Effective search space used: 613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
