Query= MSMg01no547_i21.b1 MSMg01no547_i21.b1 CHROMAT_FILE:
MSMg01no547_i21.b1 PHD_FILE: MSMg01no547_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:13 2005
(678 letters)
>mm_chr12_117845555_117846632
Length = 1078
Score = 1276 bits (660), Expect = 0.0
Identities = 669/674 (99%), Gaps = 4/674 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcttcccttacagcattttcatttcattttcaacaacatcttcaagctccaag 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttcccttagagcattttcatttcattttcaacaacatcttcaagctccaag 263
Query: 64 ctttttaaaatggaagacaagacagaacaacccatgtatggagactcccaggggaagcag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctttttaaaatggaagacaagacagaacaacccatgtatggagactcccaggggaagcag 323
Query: 124 gaaacatgggcatagatggttgttcagacacaggtgtgacagttagcctagtaaagaagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaacatgggcatagatggttgttcagacacaggtgtgacagttagcctagtaaagaagt 383
Query: 184 tcaagacatagggtggctcagaggaggctcagcatccccaggatgcagatctcatgcttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcaagacatagggtggctcagaggaggctcagcatccccaggatgcagatctcatgcttg 443
Query: 244 gagctaccatctttattattttttttaaatatttttttttattttatgtatatgagttct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagctaccatctttattattttttttaaatatttttttttattttatgtatatgagttct 503
Query: 304 ctgtagctatcttcacacacacacacacacacacacacacacacacacacacacacacac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgtagctatcttcacacacacacacacacacacacacacacacacacacacacacacac 563
Query: 364 acacacacacacacacctgatgagggcatcaagtcccattacagatggttctgagcctcc 423
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acacacacacac----ctgatgagggcatcaagtcccattacagatggttctgagcctcc 619
Query: 424 atgtagttgatggtacttgaactcaggacctctggaagagcagtcatttctgagccattt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgtagttgatggtacttgaactcaggacctctggaagagcagtcatttctgagccattt 679
Query: 484 ctccagcccccatctttttttctggtctgcggtggtgctgggcacctgtgttcattgtta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctccagcccccatctttttttctggtctgcggtggtgctgggcacctgtgttcattgtta 739
Query: 544 cgtttattcctaaggcgatcaggttaatctgggctgagctccctagaaagaaattcagtg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cgtttattcctaaggcgatcaggttaatctgggctgagctccctagaaagaaattcagtg 799
Query: 604 aaacctgccttacattctcaggtatctcatgaggacatgatctttctagtgcttcctttc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aaacctgccttacattctcaggtatctcatgaggacatgatctttctagtgcttcctttc 859
Query: 664 ttcctgttttggtc 677
||||||||||||||
Sbjct: 860 ttcctgttttggtc 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 118
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_i21.g1 MSMg01no547_i21.g1 CHROMAT_FILE:
MSMg01no547_i21.g1 PHD_FILE: MSMg01no547_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:13 2005
(616 letters)
>mm_chr12_117994523_117995538
Length = 1016
Score = 849 bits (439), Expect = 0.0
Identities = 442/443 (99%)
Strand = Plus / Minus
Query: 174 gtcaagtctttctctgcccctcaatgagacaacactttcaaacatggatgtttccttcta 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 gtcaagtctttctctgcccctcaatgagacaacactttcaaacatggatgtttccttcta 957
Query: 234 caaaccaactttactttcattgttagggattagaaatgagtcctaaggttgcgtctgcat 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 caaaccaactttactttcattgttagggattagaaatgagtcctaaggttgcgtctgcat 897
Query: 294 tccaactagatcaggtagaaattctttggatgtgattgcttgccagagcagccatgttgc 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 tccaactagatcaggtagaaattctttggatgtgattgcttgccagagcagccatgttgc 837
Query: 354 tggattaaaattcttctacacttactagaactccatcatatgagattgttttcttttcag 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 tggattaaaattcttctacacttactagaactccatcatatgagattgttttcttttcag 777
Query: 414 gagtcctttaagcttaatatttttagaatttgactatatgctccggtttagattgaatct 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gagtcctttaagcttaatatttttagaatttgactatatgctccggtttagattgaatct 717
Query: 474 cagtagaaacacttgacctccctgtaattaaatatgtaaatctttcactagatttgaaat 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 cagtagaaacacttgacctccctgtaattaaatatgtaaatctttcactagatttgaaat 657
Query: 534 ttttcttctaatttttctttatataaagtttcaacctctgattctctcttctctttcttg 593
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ttttcttctactttttctttatataaagtttcaacctctgattctctcttctctttcttg 597
Query: 594 gactcttattttgatgctaacca 616
|||||||||||||||||||||||
Sbjct: 596 gactcttattttgatgctaacca 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
