BAC Information

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BAC

Clone NameB6Ng01-002B02
Chromosome13 (Build37)
Map Location 107,622,207 - 107,623,164
singlet/doubletsinglet
Overlap geneIpo11
Upstream geneEG668025, Olfr717-ps1, LOC631097, EG620949
Downstream geneDimt1, Kif2a, LOC100040322, LOC100040350, LOC100040366, Apoo, AI197445, LOC100040820, Zswim6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002B02.bB6Ng01-002B02.g
ACCDH840204DH840205
length803961
definitionDH840204|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B02, 5' end.DH840205|Mus musculus domesticus DNA, BAC clone: B6Ng01-002B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agattctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggccatagtactaccggaggatccagcaatacctctcctggac
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataataggcagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctagtaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaaac
ctaggatacccaagatataaggtacaattttgctaaacaaatgaaactca
agaaaaaatgaagactgaagtgtggacactatgctcctccttagaattgg
gaacaaaacacccatggaaggagttacagagacaatgtttggagctgaga
tgaaaaggatggaccatgtagagattgccttatccagggatccactccat
aat
gaattcaccctcttatagaaaaaattcactctttgtggaaggaacaacat
taagaagcagaactattaactggtgagagatgccagtgtagtagtgggca
ggatggatagaaagttactctgccagtctgatgacctgttttggtaattg
attgaggggagctaaaagatgtcccgcttttgccgtaggcaattctgtac
tccattctggaagctaagggatgatgttgaggcgggtgggccaagaggct
cagttttgaatgagtaggatttcaggttcctgtagagttgatatccctgt
atgcatacctggcaagcagcagctcaggatcagggtttatctgggaaagc
tcacttaccatctaaccattgaaagtaaaaacaaaccaagccacttgctg
ccaagacaactaagcaaggaagattgggactcgagtgtttagacgcttta
atatagatatttattagaggaaatcaagtaatgcagtgattttctatatt
agtacacgtttgaagttagatgcaaataatattaagcaatagtttaataa
acaaataataaatgtttgtgatagtttatcctgaaccacaagtagatgat
cagctacgtttgttcttcctcttgatccaatttttatactttattaaaaa
gttaatactatccatatattctaaaacattctaaggtatttaatcaaaat
gataattttagcttcttttctaaaatgggaatacttgtagtaaggtaaca
gtattatataattccttaggactataggaaaagtctatactgtataatgc
cttcaacctcagatcacccagagttttcttatccctgctccatttctacc
acccaggtgtgtgattgagtgggtgtggaacacgtctgttagttttcagg
tttggtttgtattaaaacattattccttttatgtagaccagggttggcag
ggggttgagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_107622207_107623164
seq2: B6Ng01-002B02.g_68_1028 (reverse)

seq1  ATCTCAACACTTTGCCAA-CCTGGTCTACATAAAAAGACT-ATGTTTTAA  48
      |||||||| |  |||||| |||||||||||||||| || | |||||||||
seq2  ATCTCAACCCCCTGCCAACCCTGGTCTACATAAAAGGAATAATGTTTTAA  50

seq1  TACAAAACAAACCTGAAAACTAACAGACGTGTTCCACACCCACTCAATCA  98
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCAAACCTGAAAACTAACAGACGTGTTCCACACCCACTCAATCA  100

seq1  CACACCTGGGTGGTAGAAATGGAGCAGGGATAAGAAAACTCTGGGTGAAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CACACCTGGGTGGTAGAAATGGAGCAGGGATAAGAAAACTCTGGGTG-AT  149

seq1  CTGAGGTTG-AGGCATTATACAGTATAGACTTTTCCTATAGTCTTAAGGA  197
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  CTGAGGTTGAAGGCATTATACAGTATAGACTTTTCCTATAGTCCTAAGGA  199

seq1  ATTATATAATACTGTTACCTTACTACAAGTATTCCCATTTTAGAAAAGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAATACTGTTACCTTACTACAAGTATTCCCATTTTAGAAAAGAA  249

seq1  GCTAAAATTATCA-TTTGATTAAATACCTTAGAATGTTTTAGAATATATG  296
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATTATCATTTTGATTAAATACCTTAGAATGTTTTAGAATATATG  299

seq1  GATAGTATTAACTTTTTAATAAAGTATAAAAATTGGATCAAGAGGAAGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTATTAACTTTTTAATAAAGTATAAAAATTGGATCAAGAGGAAGAA  349

seq1  CAAACGTAGCTGATCATCTACTTGTGGTTCAGGATAAACTATCACAAACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTAGCTGATCATCTACTTGTGGTTCAGGATAAACTATCACAAACA  399

seq1  TTTATTATTTGTTTATTAAACTATTGCTTAATATTATTTGCATCTAACTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTGTTTATTAAACTATTGCTTAATATTATTTGCATCTAACTT  449

seq1  CAAACGTGTACTAATATAGAAAATCACTGCATTACTTGATTTCCTCTAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTGTACTAATATAGAAAATCACTGCATTACTTGATTTCCTCTAAT  499

seq1  AAATATCTATATTAAAGCGTCTAAACACTCGAGTCCCAATCTTCCTTGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTATATTAAAGCGTCTAAACACTCGAGTCCCAATCTTCCTTGCT  549

seq1  TAGTTGTCTTGGCAGCAAGTGGCTTGGTTTGTTTTTACTTTCAATGGTTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGTCTTGGCAGCAAGTGGCTTGGTTTGTTTTTACTTTCAATGGTTA  599

seq1  GATGGTAAGTGAGCTTTCCCAGATAAACCCTGATCCTGAGCTGCTGCTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAAGTGAGCTTTCCCAGATAAACCCTGATCCTGAGCTGCTGCTTG  649

seq1  CCAGGTATGCATACAGGGATATCAACTCTACAGGAACCTGAAATCCTACT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTATGCATACAGGGATATCAACTCTACAGGAACCTGAAATCCTACT  699

seq1  CATTCAAAACTGAGCCTCTTGGCCCACCCGCCTCAACATCATCCCTTAGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAAAACTGAGCCTCTTGGCCCACCCGCCTCAACATCATCCCTTAGC  749

seq1  TTCCAGAATGGAGTACAGAATTGCCTACGGCAAAAGCGGGACATCTTTTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAATGGAGTACAGAATTGCCTACGGCAAAAGCGGGACATCTTTTA  799

seq1  GCTCCCCTCAATCAATTACCAAAACAGGTCATCAGACTGGCAGAGTAACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCTCAATCAATTACCAAAACAGGTCATCAGACTGGCAGAGTAACT  849

seq1  TTCTATCCATCCTGCCCACTACTACACTGGCATCTCTCACCAGTTAATAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCATCCTGCCCACTACTACACTGGCATCTCTCACCAGTTAATAG  899

seq1  TTCTGCTTCTTAATGTTGTTCCTTCCACAAAGAGTGAATTTTTTCTATAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTCTTAATGTTGTTCCTTCCACAAAGAGTGAATTTTTTCTATAA  949

seq1  GAGGGTGAATTC  958
      ||||||||||||
seq2  GAGGGTGAATTC  961