BAC Information

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BAC

Clone NameB6Ng01-002G18
Chromosome13 (Build37)
Map Location 118,222,737 - 118,223,798
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365
Downstream geneLOC382807, Hcn1, LOC100041695, LOC674926, Mrps30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002G18.bB6Ng01-002G18.g
ACCDH840450DH840451
length1,2411,049
definitionDH840450|Mus musculus domesticus DNA, BAC clone: B6Ng01-002G18, 5' end.DH840451|Mus musculus domesticus DNA, BAC clone: B6Ng01-002G18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggggcaatgggagacattaaccattcaaacaaccgtgttcta
caccatggctcctatatgcttgcagctgtactataatgcaaaatgtattt
aattgaacatcaaaatttcatgaagtctttcacagtctcaacattgtttt
aagcccaaagtctctgtaaaaattcaagataataattgcctggtctccgc
agctctctgaaatgatggagactcagtgacccctgacctctttcattctt
tttaccacaaaagccagcatcctgtgaaaaccatttccaactttagctac
cacctttcaatgcatcctgattgtcttgaatcacattgagagaagttttt
tgttcttgttgctctcatgagctgaaaactctttttgaatcacttgctcc
agttcgaagctttgatgggtgaagtctttcccggaagaatactattccaa
tgcataacagggatttccttgacacttacagcccagcacatgatttgacc
atataattaagtggcttggttttctctgcaaactacacatttttaaaaaa
ttctctatgtcctatttacttcttcccattgtaaacatgtataaacattg
ttaataatattcataccacagattcaatattatggagccttccaattttc
tctctgccaaataaattagttcattgtgttttagcttagttaggtaaatt
ctcaaaacaaaggcaaaatgttcccagattcttttactatatatcatagg
aatatcctagaacccattgcttttaaagtccttgctgccctgagtcacct
gagtcaatactctgcagttcattttgctttgggcaccactgtctctagat
tcttgctacagattcagtcatttttccaacccagagatacaaagttatcc
acattctgcaaaatgacacaagcaaaataacatgaatggattcttcacag
ccgtagacccagtttctagccccagtttgtatttgtatatagtggctttt
ctgtttaggtgtgctctaccttttatgtgtaagggtgacacaagttagag
ttatgaacctcactgagaaaagttccatcaaatgctgtatacacatcctg
gaggaacatttaattacgatgatgtaaaaggctatgccatcctctggagc
attgcattcaggaccggtgtctggagttataaagtagggattaagcatgc
agtagactttaaataattgggcgtgtggtataccgaaatgt
gaattcttgttcaatcatgagactctttgatagatgctactaaaatagtg
aaagaaacagaaaaacacgttaaggatggtagaaagcttctcacttggat
tagtagaaacggagagaacgtctgagggatctgaaatgagttaaagggta
aaaaggcttgtacgtggataccggaagaggtgaacatgaatatgtacaga
aactgaagggtgacagacagagtgtgtgcaaatcaaggtcagaagatgat
ggttctgtctctatggtgctgcatctaggctgaagggtgggttcccttag
tagagaagccagagagggtagagagatagccttggggacaggattcagaa
gaaaaccttgaattccaagctataaaacttgagtatggtcaggcaatatg
aagaaaatttactttgtttatttgcttatttttctgttctcaggttctcg
tctatatagaaaagtaaatgcacagaggctggtgggatggctcagtgaac
aaagtgcttagaatgcaagatgccaaaacccacagtaaagcccagtatat
tagggaatctgtagtgtgtatgtgtgtgttttcacccatgggtgtataca
tgatagatccctgaatctcattagctaaacagtctacctaattagatgag
agttaggtttaataagagatgtttttaaaaagttggaaatgaagttgagg
aaaataactactactaatctctgcctttcacacctatcaatatgtgacag
gtagagctgtacacatacaaacacatacatgcgcaagcacatctgatgtt
aacagctatttggtggtattttctagcaaacttgtctctgtaaatttcct
cagctagagcaccaagcctgtctcatttttgggcttttcaaatttttctt
tgaatagctggagacaaagattgatccatcttcacaatttctaacaaaga
tattctctctttctaattcccttgctgtttggctaacttcacattctgct
ctgcacccattgtaagttttctgtaaattcagcattggctagaaactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118222737_118223798
seq2: B6Ng01-002G18.g_67_1115

seq1  GAATTCTTGTTCAATCATGAGACTCTTTGATAGATGCTACTAAAATAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTCAATCATGAGACTCTTTGATAGATGCTACTAAAATAGTG  50

seq1  AAAGAAACAGAAAAACACGTTAAGGATGGTAGAAAGCTTCTCACTTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAGAAAAACACGTTAAGGATGGTAGAAAGCTTCTCACTTGGAT  100

seq1  TAGTAGAAACGGAGAGAACGTCTGAGGGATCTGAAATGAGTTAAAGGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGAAACGGAGAGAACGTCTGAGGGATCTGAAATGAGTTAAAGGGTA  150

seq1  AAAAGGCTTGTACGTGGATACCGGAAGAGGTGAACATGAATATGTACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTTGTACGTGGATACCGGAAGAGGTGAACATGAATATGTACAGA  200

seq1  AACTGAAGGGTGACAGACAGAGTGTGTGCAAATCAAGGTCAGAAGATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGGGTGACAGACAGAGTGTGTGCAAATCAAGGTCAGAAGATGAT  250

seq1  GGTTCTGTCTCTATGGTGCTGCATCTAGGCTGAAGGGTGGGTTCCCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTCTCTATGGTGCTGCATCTAGGCTGAAGGGTGGGTTCCCTTAG  300

seq1  TAGAGAAGCCAGAGAGGGTAGAGAGATAGCCTTGGGGACAGGATTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGCCAGAGAGGGTAGAGAGATAGCCTTGGGGACAGGATTCAGAA  350

seq1  GAAAACCTTGAATTCCAAGCTATAAAACTTGAGTATGGTCAGGCAATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTTGAATTCCAAGCTATAAAACTTGAGTATGGTCAGGCAATATG  400

seq1  AAGAAAATTTACTTTGTTTATTTGCTTATTTTTCTGTTCTCAGGTTCTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATTTACTTTGTTTATTTGCTTATTTTTCTGTTCTCAGGTTCTCG  450

seq1  TCTATATAGAAAAGTAAATGCACAGAGGCTGGTGGGATGGCTCAGTGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAGAAAAGTAAATGCACAGAGGCTGGTGGGATGGCTCAGTGAAC  500

seq1  AAAGTGCTTAGAATGCAAGATGCCAAAACCCACAGTAAAGCCCAGTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTTAGAATGCAAGATGCCAAAACCCACAGTAAAGCCCAGTATAT  550

seq1  TAGGGAATCTGTAGTGTGTATGTGTGTGTTTTCACCCATGGGTGTATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAATCTGTAGTGTGTATGTGTGTGTTTTCACCCATGGGTGTATACA  600

seq1  TGATAGATCCCTGAATCTCATTAGCTAAACAGTCTACCTAATTAGATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATCCCTGAATCTCATTAGCTAAACAGTCTACCTAATTAGATGAG  650

seq1  AGTTAGGTTTAATAAGAGATGTTTTTAAAAAGTTGGAAATGAAGTTGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGGTTTAATAAGAGATGTTTTTAAAAAGTTGGAAATGAAGTTGAGG  700

seq1  AAAATAACTACTACTAATCTCTGCCTTTCACACCTATCAATATGTGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTACTACTAATCTCTGCCTTTCACACCTATCAATATGTGACAG  750

seq1  GTAGAGCTGTACACATACAAACACATACATGCGCAAGCACATCTGATGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCTGTACACATACAAACACATACATGCGCAAGCACATCTGATGTT  800

seq1  AACAGCTATTTGGTGGTATTTTCTAGCAAACTTGTCTCTGTAAATTTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTATTTGGTGGTATTTTCTAGCAAACTTGTCTCTGTAAATTTCCT  850

seq1  CAGCTAGAGCACCAAGCCTGTCTCATTTTT-GGCTTTTCAAATTTTCCTT  899
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  CAGCTAGAGCACCAAGCCTGTCTCATTTTTGGGCTTTTCAAATTTTTCTT  900

seq1  TGAATAGCTGGAGACAAAAGATTGATCCATCTTTCACAATTTCTAACAAA  949
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TGAATAGCTGGAGAC-AAAGATTGATCCATC-TTCACAATTTCTAACAAA  948

seq1  GATATTTCCTCTCTTTCTAATTCCCTTTGCCTGTTTGGCTAACTTCACAT  999
      ||||||  |||||||||||||||||||   ||||||||||||||||||||
seq2  GATATT--CTCTCTTTCTAATTCCCTT--GCTGTTTGGCTAACTTCACAT  994

seq1  TCTGCCTCTGGCACCCATTGGTAAGTTTTTCTGTAAAAATTCAGCATTGG  1049
      |||| |||| ||||||||| ||||| ||||||||  ||||||||||||||
seq2  TCTG-CTCT-GCACCCATT-GTAAG-TTTTCTGT--AAATTCAGCATTGG  1038

seq1  CTAAGAAAACTAA  1062
      |||   |||||||
seq2  CTA--GAAACTAA  1049