BAC Information

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BAC

Clone NameB6Ng01-003E04
Chromosome13 (Build37)
Map Location 12,350,198 - 12,502,613
singlet/doubletdoublet
Overlap geneMtr, LOC100039826, Actn2, EG432725, Heatr1
Upstream geneLOC100039648, Zp4, Ryr2, LOC100039678
Downstream geneLOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003E04.bB6Ng01-003E04.g
ACCDH841030DH841031
length7001,107
definitionDH841030|Mus musculus domesticus DNA, BAC clone: B6Ng01-003E04, 5' end.DH841031|Mus musculus domesticus DNA, BAC clone: B6Ng01-003E04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,501,914 - 12,502,613)(12,350,198 - 12,351,318)
sequence
gaattcattattatactgttctggatcaactggtgacaggttgtctagtc
tcctagacaaaaatattgctcagagatcaccaagatacaacctcaaatcc
attccaaaaaggagttatctagccaataactttgtcctgtcaaatatctt
aaaaggaaacaaacaaaaatcaaaaatctgaaaaaaaaaaaaaaacaaaa
acttctaactgtaacaaaatatattaaatcagacatctcagctccactgg
acagtagaaattcactcatgcattaaaaaaagaaataaaaaataaagcat
atcccagggctggagaaagaatggatcagctaagaagactacactggctg
ttcttctagaagacctgggctgggtttgcaacactcacatggtaatttaa
catgcagtagtaataccacctctggggactccaacaccttcttctggctt
ccagaaacacaaggtatatatgaggtgcacataaatttatacagggcaaa
cccctatagatcacattgccaaagaaacacatatcctctctgggaaatgg
agagctagtttctattaaggtagatcaacacactccactggctggccctg
aaccagcacatgggcagcacaaactggacttagagggttataaaggaaga
atggaagacacaaaactgagaggaggtaagggggaaaggggtggatctag

gaattccaccgcgggcggctccagccagcgttttctggcctgacgaactg
acaagatccccgaagctccagagccgacacaccgggcctccgggtaccgt
gcctcgggcacgcgcttcttacggaactcccaagcgcagagctccccgct
acagagcaaggccgcagcgacagactaaaggaattgacgacgtagagacg
gccgccgccgccactgcgccgttagctctccgctcaatctagcctccggc
aggagggcccgcccccttcccggcatgtgattggccctcaacagctcctc
gccgccgtgtataggctgttggtcgttacccaatcgccggaggctttgct
ccgtggccctatgggagatgtagtcctgagtactgggtccctatggagac
cagagcgtctcttccctgagttctggaaatggttcccaaagacctctcca
agttctagtcgaaaaattcatactatagtattggctctcatcagtggtgg
agtatcaagggccaggaatctgaagtcagaaaattaattgtagcttagtt
ttgcagacactaaatatcttgtctccctcatccacagaaaagaaagacta
gaatgaaagtgactattaatttataggcttgcaacaggggttaaaaaaag
aacccgtgagtacactatggaaattatgaggcactatagatgctaatggc
cacactgatactaaacatttactgagtaaaacactcaagttgagatacac
acttggatagcacaagtgggccagtaagaacttgcacaaataattaaaca
tggaaagaagaaagtaggaaacatcccaaagggtttatggtattctaagg
caaataagtatctggggcagagacgggaagattcctgggttttgctagct
gccagtctgaatgaaaagccagtgagctacaggttcagaaaacatcctgg
ctaaagaaatatgtggatagtgagaaaggagaatacagatgtctcctttg
gctctgcaatacaggagctcatttatctagccccagacatgcatacaatg
cacacacgccacacatcacaacaacaagtagtgggtctaaggaaggctat
ttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12501914_12502613
seq2: B6Ng01-003E04.b_49_748 (reverse)

seq1  CTAGATCCACCCCTTTCCCCCTTACCTCCTCTCAGTTTTGTGTCTTCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCCACCCCTTTCCCCCTTACCTCCTCTCAGTTTTGTGTCTTCCAT  50

seq1  TCTTCCTTTATAACCCTCTAAGTCCAGTTTGTGCTGCCCATGTGCTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTATAACCCTCTAAGTCCAGTTTGTGCTGCCCATGTGCTGGTT  100

seq1  CAGGGCCAGCCAGTGGAGTGTGTTGATCTACCTTAATAGAAACTAGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCCAGCCAGTGGAGTGTGTTGATCTACCTTAATAGAAACTAGCTCT  150

seq1  CCATTTCCCAGAGAGGATATGTGTTTCTTTGGCAATGTGATCTATAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCCCAGAGAGGATATGTGTTTCTTTGGCAATGTGATCTATAGGGG  200

seq1  TTTGCCCTGTATAAATTTATGTGCACCTCATATATACCTTGTGTTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTGTATAAATTTATGTGCACCTCATATATACCTTGTGTTTCTGG  250

seq1  AAGCCAGAAGAAGGTGTTGGAGTCCCCAGAGGTGGTATTACTACTGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGAAGAAGGTGTTGGAGTCCCCAGAGGTGGTATTACTACTGCATG  300

seq1  TTAAATTACCATGTGAGTGTTGCAAACCCAGCCCAGGTCTTCTAGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTACCATGTGAGTGTTGCAAACCCAGCCCAGGTCTTCTAGAAGAA  350

seq1  CAGCCAGTGTAGTCTTCTTAGCTGATCCATTCTTTCTCCAGCCCTGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGTGTAGTCTTCTTAGCTGATCCATTCTTTCTCCAGCCCTGGGAT  400

seq1  ATGCTTTATTTTTTATTTCTTTTTTTAATGCATGAGTGAATTTCTACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTATTTTTTATTTCTTTTTTTAATGCATGAGTGAATTTCTACTGT  450

seq1  CCAGTGGAGCTGAGATGTCTGATTTAATATATTTTGTTACAGTTAGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGAGCTGAGATGTCTGATTTAATATATTTTGTTACAGTTAGAAGT  500

seq1  TTTTGTTTTTTTTTTTTTTTCAGATTTTTGATTTTTGTTTGTTTCCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTTTTTTTTCAGATTTTTGATTTTTGTTTGTTTCCTTTT  550

seq1  AAGATATTTGACAGGACAAAGTTATTGGCTAGATAACTCCTTTTTGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTGACAGGACAAAGTTATTGGCTAGATAACTCCTTTTTGGAAT  600

seq1  GGATTTGAGGTTGTATCTTGGTGATCTCTGAGCAATATTTTTGTCTAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGAGGTTGTATCTTGGTGATCTCTGAGCAATATTTTTGTCTAGGA  650

seq1  GACTAGACAACCTGTCACCAGTTGATCCAGAACAGTATAATAATGAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGACAACCTGTCACCAGTTGATCCAGAACAGTATAATAATGAATTC  700

seq1: chr13_12350198_12351318
seq2: B6Ng01-003E04.g_67_1173

seq1  GAATTCCACCGCGGGCGGCTCCAGCCAGCGTTTTCTGGCCTGACGAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCGCGGGCGGCTCCAGCCAGCGTTTTCTGGCCTGACGAACTG  50

seq1  ACAAGATCCCCGAAGCTCCAGAGCCGACACACCGGGCCTCCGGGTACCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATCCCCGAAGCTCCAGAGCCGACACACCGGGCCTCCGGGTACCGT  100

seq1  GCCTCGGGCACGCGCTTCTTACGGAACTCCCAAGCGCAGAGCTCCCCGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGGGCACGCGCTTCTTACGGAACTCCCAAGCGCAGAGCTCCCCGCT  150

seq1  ACAGAGCAAGGCCGCAGCGACAGACTAAAGGAATTGACGACGTAGAGACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCAAGGCCGCAGCGACAGACTAAAGGAATTGACGACGTAGAGACG  200

seq1  GCCGCCGCCGCCACTGCGCCGTTAGCTCTCCGCTCAATCTAGCCTCCGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCGCCGCCACTGCGCCGTTAGCTCTCCGCTCAATCTAGCCTCCGGC  250

seq1  AGGAGGGCCCGCCCCCTTCCCGGCATGTGATTGGCCCTCAACAGCTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGCCCGCCCCCTTCCCGGCATGTGATTGGCCCTCAACAGCTCCTC  300

seq1  GCCGCCGTGTATAGGCTGTTGGTCGTTACCCAATCGCCGGAGGCTTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCGTGTATAGGCTGTTGGTCGTTACCCAATCGCCGGAGGCTTTGCT  350

seq1  CCGTGGCCCTATGGGAGATGTAGTCCTGAGTACTGGGTCCCTATGGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGCCCTATGGGAGATGTAGTCCTGAGTACTGGGTCCCTATGGAGAC  400

seq1  CAGAGCGTCTCTTCCCTGAGTTCTGGAAATGGTTCCCAAAGACCTCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCGTCTCTTCCCTGAGTTCTGGAAATGGTTCCCAAAGACCTCTCCA  450

seq1  AGTTCTAGTCGAAAAATTCATACTATAGTATTGGCTCTCATCAGTGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGTCGAAAAATTCATACTATAGTATTGGCTCTCATCAGTGGTGG  500

seq1  AGTATCAAGGGCCAGGAATCTGAAGTCAGAAAATTAATTGTAGCTTAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCAAGGGCCAGGAATCTGAAGTCAGAAAATTAATTGTAGCTTAGTT  550

seq1  TTGCAGACACTAAATATCTTGTCTCCCTCATCCACAGAAAAGAAAGACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACACTAAATATCTTGTCTCCCTCATCCACAGAAAAGAAAGACTA  600

seq1  GAATGAAAGTGACTATTAATTTATAGGCTTGCAACAGGGGTTAAAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAGTGACTATTAATTTATAGGCTTGCAACAGGGGTTAAAAAAAG  650

seq1  AACCCGTGAGTACACTATGGAAATTATGAGGCACTATAGATGCTAATGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGTGAGTACACTATGGAAATTATGAGGCACTATAGATGCTAATGGC  700

seq1  CACACTGATACTAAACATTTACTGAGTAAAACACTCAAGTTGAGATACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGATACTAAACATTTACTGAGTAAAACACTCAAGTTGAGATACAC  750

seq1  ACTTGGATAGCACAAGTGGGCCAGTAAGAACTTGCACAAATAATTAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGATAGCACAAGTGGGCCAGTAAGAACTTGCACAAATAATTAAACA  800

seq1  TGGAAAGAAGAAAGTAGGAAACATCCCAAAGGGTTTATGGTATTCTAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAAGAAAGTAGGAAACATCCCAAAGGGTTTATGGTATTCTAAGG  850

seq1  CAAATAAGTATCTGGGGCAGAGACGGGAAGATTCCTGGGTTTTGCTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGTATCTGGGGCAGAGACGGGAAGATTCCTGGGTTTTGCTAGCT  900

seq1  GCCAGTCTGAATGAAAAGCCAGTGAGCTACAGGTTCAGAAAACAATCCTG  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCCAGTCTGAATGAAAAGCCAGTGAGCTACAGGTTCAGAAAAC-ATCCTG  949

seq1  GCTAAAGAAATAAGGTGGATAGTGAGAAAGGAGAATACAGATGGTCTCCT  1000
      ||||||||||| | |||||||||||||||||||||||||||| |||||||
seq2  GCTAAAGAAAT-ATGTGGATAGTGAGAAAGGAGAATACAGAT-GTCTCCT  997

seq1  TTGGGCTCTGCAATACAGGAGCTCATTTATCTTAGCACACAGACATGCAT  1050
      || |||||||||||||||||||||||||||| |||| | |||||||||||
seq2  TT-GGCTCTGCAATACAGGAGCTCATTTATC-TAGC-CCCAGACATGCAT  1044

seq1  ACAATGCACACACGCACACACA-CACAAACAAACAAAGTAGTTGGGTCTT  1099
      ||||||||||||||| |||||| ||| |||||   |||||| ||||||| 
seq2  ACAATGCACACACGC-CACACATCAC-AACAA--CAAGTAG-TGGGTCT-  1088

seq1  AAAGGAAGGGTATATTTTTTTT  1121
       |||||||| ||| ||||||  
seq2  -AAGGAAGGCTATTTTTTTT--  1107