BAC Information

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BAC

Clone NameB6Ng01-004P04
Chromosome13 (Build37)
Map Location 68,677,715 - 68,678,811
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp87, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
Downstream geneLOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205, LOC218332, Pols
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004P04.bB6Ng01-004P04.g
ACCDH842221DH842222
length2021,073
definitionDH842221|Mus musculus domesticus DNA, BAC clone: B6Ng01-004P04, 5' end.DH842222|Mus musculus domesticus DNA, BAC clone: B6Ng01-004P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgttaatggagttatttgattctcaggagtct
tgaggagtacacttggctcaagatgcatatgtagtagaggatggtcttgt
caggcatcaatggaaggagaggtccttggtgctatgaaggctggatagat
gccccagtatagggaaatacaaggtggagaggttggagttggtggttggg
tg
gaattcctctgccccagggtgtgccttgctcatgtgtagctgagacagga
aatcacaagcttgagataacactttctgtcctgagtgcttttccctctta
tgctcctggtagctcaaacatgtgcagagatggtatggctagacctctgg
cttggctgatcagcaaggatattgagtttgaatagtctaagcaaaagtat
taggagatggagtttgttacggtttgtataggcttggcctagggagtggc
actattagaagatatggccttgttggagtaggtatgtccctcttggagta
ggtgtgtcaccatgggtgttggttttaagaccctcatcctagctacctgg
aagccagtattctgctagcacccttcagaggaagatgtagaactctactc
ctcctgtattatgccttcctggatgctgccatgcttccggccttgatgat
aatggactgaacctctgaacttgtaagccaaccccaattaaatgttctta
taagagttaccttggtcgtgttgcctgttcatagcagtaaaaccctaaga
cagagctgttggaaacattcagagacagagtccttggtaagggacagatg
ggtggagtttatcctcccactttccaccagatgaggagctaacacccaga
tgacaacagaattcttaggtcttcatttctgagttaaattagctcaacga
cctgtatatttttagccagctgaggtgttgctgttgaggctaagagaacc
cctatgggaaagataagtaaaaaataatctggatatcttgggatctgttt
actcaatcctctccatcccaagctagcagaaaaaataaaaataagaaaaa
gcaaaatgcatcacaaaatgcggctctaacagtgttgataagtagtataa
tttacacagtatttcatagttactgttcttaccagtggggtgtctggcac
acagctgtaaaaataatgtagcctaaatttgtactcgtttcagctgaaat
gctagccctattcagagagaatttatgttcagctacagaaggcaggcata
ttcagttgcagaagactggcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68677715_68678811
seq2: B6Ng01-004P04.g_68_1140 (reverse)

seq1  AAAGCCAGTCCTCCTTTCACAACTGAAATATGCCCCTGCCTTTCCTGGTG  50
      |||||||||    |||   |||||| ||||||  ||||||||  || || 
seq2  AAAGCCAGT----CTTCTGCAACTG-AATATG--CCTGCCTT--CT-GTA  40

seq1  GCTGGAACATAAAATTTCTCCCTCTGATTAGGGCCTAGCATTTCAAGCTG  100
      ||| |||||||||  ||||  |||||| ||||| |||||||||| |||||
seq2  GCT-GAACATAAA--TTCT--CTCTGAATAGGG-CTAGCATTTC-AGCTG  83

seq1  AAACGAGTACCAAATTTTTAGGCTACATTATTTTTACAGCTGTGTGCCAG  150
      |||||||||| ||   ||||||||||||||||||||||||||||||||||
seq2  AAACGAGTACAAA---TTTAGGCTACATTATTTTTACAGCTGTGTGCCAG  130

seq1  ACCACCCACTGGTAAGAACAGTAACCTAATGAAATTACTGTTGTAAATTA  200
      ||  |||||||||||||||||||||   |||||| ||||| |||||||||
seq2  ACACCCCACTGGTAAGAACAGTAAC--TATGAAA-TACTG-TGTAAATTA  176

seq1  TAACTACTTATCAACACTGTTAGAGCCGCATTTTGTGATGCATTTTGCTT  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-ACTACTTATCAACACTGTTAGAGCCGCATTTTGTGATGCATTTTGCTT  225

seq1  TTTCTTATTTTTATTTTTTCTGCTAGCTTGGGATGGAGAGGATTGAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTTTTATTTTTTCTGCTAGCTTGGGATGGAGAGGATTGAGTAA  275

seq1  ACAGATCCCAAGATATCCAGATTATTTTTTACTTATCTTTCCCATAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCCAAGATATCCAGATTATTTTTTACTTATCTTTCCCATAGGGG  325

seq1  TTCTCTTAGCCTCAACAGCAACACCTCAGCTGGCT-AAAATATACAGGTC  399
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTCTTAGCCTCAACAGCAACACCTCAGCTGGCTAAAAATATACAGGTC  375

seq1  GTTGAGCTAATTTAACTCAGAAATGAAGACCTAAGAATTCTGTTGTCATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCTAATTTAACTCAGAAATGAAGACCTAAGAATTCTGTTGTCATC  425

seq1  TGGGTGTTAGCTCCTCATCTGGTGGAAAGTGGGAGGATAAACTCCACCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTAGCTCCTCATCTGGTGGAAAGTGGGAGGATAAACTCCACCCA  475

seq1  TCTGTCCCTTACCAAGGACTCTGTCTCTGAATGTTTCCAACAGCTCTGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCCTTACCAAGGACTCTGTCTCTGAATGTTTCCAACAGCTCTGTC  525

seq1  TTAGGGTTTTACTGCTATGAACAGGCAACACGACCAAGGTAACTCTTATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTTTTACTGCTATGAACAGGCAACACGACCAAGGTAACTCTTATA  575

seq1  AGAACATTTAATTGGGGTTGGCTTACAAGTTCAGAGGTTCAGTCCATTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATTTAATTGGGGTTGGCTTACAAGTTCAGAGGTTCAGTCCATTAT  625

seq1  CATCAAGGCCGGAAGCATGGCAGCATCCAGGAAGGCATAATACAGGAGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGGCCGGAAGCATGGCAGCATCCAGGAAGGCATAATACAGGAGGA  675

seq1  GTAGAGTTCTACATCTTCCTCTGAAGGGTGCTAGCAGAATACTGGCTTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGTTCTACATCTTCCTCTGAAGGGTGCTAGCAGAATACTGGCTTCC  725

seq1  AGGTAGCTAGGATGAGGGTCTTAAAACCAACACCCATGGTGACACACCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCTAGGATGAGGGTCTTAAAACCAACACCCATGGTGACACACCTA  775

seq1  CTCCAAGAGGGACATACCTACTCCAACAAGGCCATATCTTCTAATAGTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGAGGGACATACCTACTCCAACAAGGCCATATCTTCTAATAGTGC  825

seq1  CACTCCCTAGGCCAAGCCTATACAAACCGTAACAAACTCCATCTCCTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCTAGGCCAAGCCTATACAAACCGTAACAAACTCCATCTCCTAAT  875

seq1  ACTTTTGCTTAGACTATTCAAACTCAATATCCTTGCTGATCAGCCAAGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGCTTAGACTATTCAAACTCAATATCCTTGCTGATCAGCCAAGCC  925

seq1  AGAGGTCTAGCCATACCATCTCTGCACATGTTTGAGCTACCAGGAGCATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCTAGCCATACCATCTCTGCACATGTTTGAGCTACCAGGAGCATA  975

seq1  AGAGGGAAAAGCACTCAGGACAGAAAGTGTTATCTCAAGCTTGTGATTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAAAGCACTCAGGACAGAAAGTGTTATCTCAAGCTTGTGATTTC  1025

seq1  CTGTCTCAGCTACACATGAGCAAGGCACACCCTGGGGCAGAGGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAGCTACACATGAGCAAGGCACACCCTGGGGCAGAGGAATTC  1073