BAC Information

Click to search

BAC

Clone NameB6Ng01-007E21
Chromosome13 (Build37)
Map Location 69,325,352 - 69,326,246
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
Downstream geneLOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10, EG620143, LOC100042291
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007E21.bB6Ng01-007E21.g
ACCDH843914DH843915
length1,215893
definitionDH843914|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E21, 5' end.DH843915|Mus musculus domesticus DNA, BAC clone: B6Ng01-007E21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgtcctagcaaagtctgggccccaagtacccatgtgtgtattg
gatggcctctttctgctttcttctggaactttgttcctgaagctactcct
ctgagcacttacataatcaaatgctaagtttctctgggtccatttgcatc
agtatataagagtgctgtgtttgctctcatttaaatatccctccacagaa
ccactccccagctgctaccccatttcactactccctttaaagtccatttt
ctaaaaagaaggcctatttctgtcttcacattctcacctcacactctctt
ttgggtacatatcaaatatcactttgaccagcagtcttgttggcattagc
tttatcaaggtcaccaacaacttgcattccccaggtctcatggtccaatc
tcattctcagcagcatttgggagatcttatttctccctctctgcgctggc
tagtttttgtcaactgcacacaaattagagtcaactgaaaagaggaaaca
tcaactgataaacttcttccttcaaattggcctgtggggcattttctcaa
ctgatgattaatgtggaagagcccagccagtgggtggtgccacccctggg
caagtggtcctggctgctataagaaaggaagctgagcaaaccatgaggag
cctcagacggacagtaagcagcattctctcctggtctctgctacagttcc
tgcctcaggttcctgtcttgagttacttcttggtttccttgtatgatgaa
ctataacctgcaaggcacataaaccctttcttccccaagtttctattcaa
tgttgtctttatcacagcaacagggatgcagaagaatacatgggcaaata
cctgctccttgtgtttaccctggatggtcgacattttggaaggcatttca
ttctcagtgttttccagtagattctctaaaggtctgcatggttgagagtt
gcccaactcaagctttttccagtttcacacaaatgcaggtgatagatcca
gtcatcagaagctctttcagtgactcttctatggatgctgctttctcctg
aggttcgtatcaatggtcactcgctgactctcaacgaaaatacctcctaa
tgcagaagtatggtccaatttttcttcgctgtaattccccagcctaaaca
cgactggttcagagatcattaattgttgagaacgagagggttatacagat
aactctgatcaacgt
gaattctctgctgtccaaaaggaacaaaaataacagttgtataatactgc
aatttttttttgaattatgggtttgtgcatattctttattcctgaagtcc
acgaggtgggagctcccccactgccctctttgttacatctcctctgttta
ctcttctgtgtattagaatggtcattttattagtgagcagataactgagt
gtatcttttatgaatatggatccttactgatttagagtaaattgataaca
gttatttatcaataaactgaagaaaggattccatcaatatgtactaaata
tgacttgattatttcattgttttaatgaatcttataattaaggagaattg
aggaaagaaattttttttgaaaaaattataaaggtcttcagcctgaaaga
ttccaaattatgtggttctttgtgcccgtgctcctggagatgtacataag
atatatgttttcaattaaaaaaaaacataattagtgaacattacaaaatc
attatgtatttgagctgactggaagcaatgctttgttcattttctccctt
gcatccttgggaagtaaccttcagagtatttcccagcagaccttaagtca
ttacttttatagaaaaaggcagtctagcccagccatggtggggttctgta
cttattacccagtagatgcccgctgtggtggagctgggtggtagagccga
gtggagatgctaactagagcattgtagaggctaggaagggcagccgggcc
tcctgtcacagagctcatctgagggagcagacctaagctggcatgtccca
ccttgtcttccacatccatgaaagggactcacagggaacactgtcagtgg
ggggaggagctgtgagacttccggtaattttctgagaaaccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_69325352_69326246
seq2: B6Ng01-007E21.g_67_959

seq1  GAATTCTCTGCTGTCCAAAAGGAACAAAAATAACAGTTGTATAATACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTGTCCAAAAGGAACAAAAATAACAGTTGTATAATACTGC  50

seq1  AATTTTTTTTTGAATTATGGGTTTGTGCATATTCTTTATTCCTGAAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTTTGAATTATGGGTTTGTGCATATTCTTTATTCCTGAAGTCC  100

seq1  ACGAGGTGGGAGCTCCCCCACTGCCCTCTTTGTTACATCTCCTCTGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGGTGGGAGCTCCCCCACTGCCCTCTTTGTTACATCTCCTCTGTTTA  150

seq1  CTCTTCTGTGTATTAGAATGGTCATTTTATTAGTGAGCAGATAACTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTGTGTATTAGAATGGTCATTTTATTAGTGAGCAGATAACTGAGT  200

seq1  GTATCTTTTATGAATATGGATCCTTACTGATTTAGAGTAAATTGATAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTTTATGAATATGGATCCTTACTGATTTAGAGTAAATTGATAACA  250

seq1  GTTATTTATCAATAAACTGAAGAAAGGATTCCATCAATATGTACTAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTATCAATAAACTGAAGAAAGGATTCCATCAATATGTACTAAATA  300

seq1  TGACTTGATTATTTCATTGTTTTAATGAATCTTATAATTAAGGAGAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGATTATTTCATTGTTTTAATGAATCTTATAATTAAGGAGAATTG  350

seq1  AGGAAAGAAATTTTTTTTGAAAAAATTATAAAGGTCTTCAGCCTGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAAATTTTTTTTGAAAAAATTATAAAGGTCTTCAGCCTGAAAGA  400

seq1  TTCCAAATTATGTGGTTCTTTGTGCCCGTGCTCCTGGAGATGTACATAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATTATGTGGTTCTTTGTGCCCGTGCTCCTGGAGATGTACATAAG  450

seq1  ATATATGTTTTCAATTAAAAAAAAACATAATTAGTGAACATTACAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTTTTCAATTAAAAAAAAACATAATTAGTGAACATTACAAAATC  500

seq1  ATTATGTATTTGAGCTGACTGGAAGCAATGCTTTGTTCATTTTCTCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTATTTGAGCTGACTGGAAGCAATGCTTTGTTCATTTTCTCCCTT  550

seq1  GCATCCTTGGGAAGTAACCTTCAGAGTATTTCCCAGCAGACCTTAAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTTGGGAAGTAACCTTCAGAGTATTTCCCAGCAGACCTTAAGTCA  600

seq1  TTACTTTTATAGAAAAAGGCAGTCTAGCCCAGCCATGGTGGGGTTCTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTATAGAAAAAGGCAGTCTAGCCCAGCCATGGTGGGGTTCTGTA  650

seq1  CTTATTACCCAGTAGATGCCCGCTGTGGTGGAGCTGGGTGGTAGAGCCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTACCCAGTAGATGCCCGCTGTGGTGGAGCTGGGTGGTAGAGCCGA  700

seq1  GTGGAGATGCTAACTAGAGCATTGTAGAGGCTAGGAAGGGCAGCCGGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGATGCTAACTAGAGCATTGTAGAGGCTAGGAAGGGCAGCCGGGCC  750

seq1  TCCTGTCACAGAGCTCATCTGA-GGAGCAGACCTAAAGCTGGCATGTCCC  799
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TCCTGTCACAGAGCTCATCTGAGGGAGCAGACCT-AAGCTGGCATGTCCC  799

seq1  ACCTTGTCTTCCACATCCATGAAAAGGACTCACAGGAAACACTGTCAGTG  849
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  ACCTTGTCTTCCACATCCATGAAAGGGACTCACAGGGAACACTGTCAGTG  849

seq1  GGGGGAGGAGCTTGTGAGACTTCCGGTAATATTCATGAGAAACCAA  895
      ||||||||||| |||||||||||||||||| ||| |||||||||||
seq2  GGGGGAGGAGC-TGTGAGACTTCCGGTAATTTTC-TGAGAAACCAA  893