BAC Information

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BAC

Clone NameB6Ng01-008B06
Chromosome13 (Build37)
Map Location 35,303,170 - 35,303,735
singlet/doubletsinglet
Overlap genenone
Upstream gene3110004L20Rik, LOC620132, EG666666, 1300014I06Rik, D0H6S2654E, EG432746, LOC666677, Prpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik, Peci
Downstream geneCdyl, Rpp40, LOC100041568, Ppp1r3g, Lyrm4, LOC100042773, Fars2, LOC100041590
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008B06.bB6Ng01-008B06.g
ACCDH844457DH844458
length649560
definitionDH844457|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B06, 5' end.DH844458|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatcctcacattctgggttgatttgtcatttacatatgccttat
gtttgtgttttattgggcatcactcaagtattttccttaagcacatcctt
cttaatttcattgagctgtttcattgtatctttaaactccttgaagactt
taatgaagtttatgattgttctcttaaattttgtgttttgtagttcgtct
agataattctcattgacacacatttctataagactagtagttttacagag
aagatcctggcttgatctttcatgttgtttgtatttttgtgatgagatct
ggctatgtaaaagtttcctgtagtttgatatggacacagcagattgaggc
agaagaaaaggcatgcaaataggttgggcctagaggttggaaatgacttg
aatggaatgaagtcagttagccataattgactggggtggtttacatcatc
taactcctgatctatacctgtagtatggaggtatatctgatggagttgaa
agattgtatgtggcatgggagggactagggactcaggataggtaggtaag
atcctctcataagtttagaaattgttgatagtgcaaacaaagggtggggg
gcaaactcagagatctatcgggtttggtagggtgagtggatggagaagg
tgactttgctctctgctgcccggcagtacacaggagagatgtgacaagct
gatctggaatccactcctaatctcacaacaaagagtgctcacctgctact
gtagcatctataggtccatgactgtgttagagatccatgcagtgtcagga
aaggttagggacataagaaaggactgccagcagcaggggacagttggtga
ccagaaacaacagagttccctgtctaatattttacctgtgattttcttcc
atgctgttggctgtgggtggctcctgtctattccttacttattcatagta
aggaatagacaggaggttgattgctaagccactgggcatgggaggaaggg
aaggagctctgagtgggtcaggggacccaggtgtgaaagaaactaccttg
cctgataagaggcaggagttattggtttgtggggagggaggaatgacaag
gaagaactaggtccagttttagtctgtagtggtttacatggtcccgatca
ctgaggggaacttaccagttgtacgatgaaaagcccgccactatgtgtgt
tttcaattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_35303170_35303735
seq2: B6Ng01-008B06.g_67_632

seq1  GAATTCTGACTTTGCTCTCTGCTGCCCGGCAGTACACAGGAGAGATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTTTGCTCTCTGCTGCCCGGCAGTACACAGGAGAGATGTGA  50

seq1  CAAGCTGATCTGGAATCCACTCCTAATCTCACAACAAAGAGTGCTCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGATCTGGAATCCACTCCTAATCTCACAACAAAGAGTGCTCACCT  100

seq1  GCTACTGTAGCATCTATAGGTCCATGACTGTGTTAGAGATCCATGCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTAGCATCTATAGGTCCATGACTGTGTTAGAGATCCATGCAGTG  150

seq1  TCAGGAAAGGTTAGGGACATAAGAAAGGACTGCCAGCAGCAGGGGACAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAGGTTAGGGACATAAGAAAGGACTGCCAGCAGCAGGGGACAGT  200

seq1  TGGTGACCAGAAACAACAGAGTTCCCTGTCTAATATTTTACCTGTGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACCAGAAACAACAGAGTTCCCTGTCTAATATTTTACCTGTGATTT  250

seq1  TCTTCCATGCTGTTGGCTGTGGGTGGCTCCTGTCTATTCCTTACTTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATGCTGTTGGCTGTGGGTGGCTCCTGTCTATTCCTTACTTATTC  300

seq1  ATAGTAAGGAATAGACAGGAGGTTGATTGCTAAGCCACTGGGCATGGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAGGAATAGACAGGAGGTTGATTGCTAAGCCACTGGGCATGGGAG  350

seq1  GAAGGGAAGGAGCTCTGAGTGGGTCAGGGGACCCAGGTGTGAAAGAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAAGGAGCTCTGAGTGGGTCAGGGGACCCAGGTGTGAAAGAAACT  400

seq1  ACCTTGCCTGATAAGAGGCAGGAGTTATTGGTTTGTGGGGAGGGAGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCCTGATAAGAGGCAGGAGTTATTGGTTTGTGGGGAGGGAGGAAT  450

seq1  GACAAGGAAGAACTAGGTCCAGTTTTAGTCTGTAGTGGTTTACATGGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGAAGAACTAGGTCCAGTTTTAGTCTGTAGTGGTTTACATGGTCC  500

seq1  CGATCACTGAGGGGAACTTACCAGTTGTACGATGAAAAGCCAGCCACTAT  550
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CGATCACTGAGGGGAACTTACCAGTTGTACGATGAAAAGCCCGCCACTAT  550

seq1  GTGTGTTTTCAATTCT  566
      ||||||||||||||||
seq2  GTGTGTTTTCAATTCT  566