BAC Information

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BAC

Clone NameB6Ng01-010D11
Chromosome13 (Build37)
Map Location 112,077,881 - 112,210,785
singlet/doubletdoublet
Overlap geneLOC100040640, EG621953
Upstream geneEG432803, 9830130M13Rik, Plk2, LOC100040614, LOC668159, 4732495G21Rik
Downstream geneGpbp1, LOC100040666, Mier3, Map3k1, LOC668181, LOC100040716, LOC100041161, LOC100041175, Ankrd55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010D11.bB6Ng01-010D11.g
ACCDH845947DH845948
length6761,094
definitionDH845947|Mus musculus domesticus DNA, BAC clone: B6Ng01-010D11, 5' end.DH845948|Mus musculus domesticus DNA, BAC clone: B6Ng01-010D11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,210,110 - 112,210,785)(112,077,881 - 112,078,968)
sequence
gaattccagttctatgactaggaaaatatatagagatttccatcaagcat
gtatgtgatatggccactcttgcactttttgcttcttgagacagggtttt
atgcagtccattattggccttaggcttgctatgtatctgaaccagtcttg
attctgcactgctcaatgctgaaattgctggcatgtgtcactacaccaag
tctttaacttttatttttattaaatagaaagattacttaagcctaggaaa
tgaagaccagcctatgccacaaagacactgtctccaagacattagaacaa
aaagcaacccaatagaacatttacatttgtgggctggagagatggctcag
cagttaaagagcactgactgctcttctgaaggtcctgagttcaaatccca
gcaaccacatggtggctcacaaccatctgtgatgatatttgatgccctct
tctggggtatctgaagacagttacagtgtacttacacataaataaataaa
tcttcgaaaaaaaagtgtcatggtttcgaacaccttcagtcccaatgctg
cagagaaggtagatctctgagttcaagaccaagcagggctacatagtgag
actgaggaggaaaaaaatgtttaaaactactgtatatgtgtatgctgtgt
gtgtcagaagggtagaggagggaggg
gaattccttaacactcccctccccaaacaaagggttcattctgaaaaaca
atatggagaatcctataaacgctaaaaatggcacgctatatgccccagta
atctcactagtgaacacagagccaaagaaaacagaaccagagagcatcaa
agagatacctacatccccttcattattgtgttaccattcacaatagccaa
atataaaatcaacatgggtgcccatcagtgcacaagtgaataaaccaaga
tgcaggacaggtgtacagtgggctactcttcatccactaagaagtaaagg
ttgtcatttgtgtccagggagagctgtaagccatcctgttaaatttacta
agccaggcacagaggacaggcgttgcatgttctcatttgtggaaactaaa
atatccatgatatagaagacagcggaacactgacaagagagactgagaag
aaggagaagaagaagtacgcaaggaggtttaggaagaagacactaagcac
cgttaagtggaaagaaatggttctggtgtcccattggcaaggctgactat
ggcctagaacctgtgatatctttccataacaagcgatcttaagcacatag
agatgattcatgcttgcatacatggaaatgccagctgccctgagttgctc
attattcttcgtgtgcctgtaactgaactgttaagttagatttcacaaac
atcttagccattctcactggtgtgaggtggaatctcagggttgttttgat
ttgcatttccctgatgattaaggatgttgaacattttttcaggtgcttct
ctgccattcggtattcctcaggtgagaattctttgttcagttctgagccc
cattttttaaagggggttatttgattttctgaggtccaccttcttgagtt
ctttatatatgttgggatattagtccccttatctgatttaaggattagta
aaagatcctttcccagtctgttggtggtctttttgtcttatagacagtgg
tcttttgcttgcagaaacttttgaagttcattaggtcccatttgctcaat
tctcgatcttacagcacaagctaatgctggttctgttaggaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_112210110_112210785
seq2: B6Ng01-010D11.b_48_723 (reverse)

seq1  CCCTCCCTCCTCTACCCTTCTGACACACACAGCATACACATATACAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCCTCTACCCTTCTGACACACACAGCATACACATATACAGTAG  50

seq1  TTTTAAACATTTTTTTCCTCCTCAGTCTCACTATGTAGCCCTGCTTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACATTTTTTTCCTCCTCAGTCTCACTATGTAGCCCTGCTTGGTC  100

seq1  TTGAACTCAGAGATCTACCTTCTCTGCAGCATTGGGACTGAAGGTGTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCAGAGATCTACCTTCTCTGCAGCATTGGGACTGAAGGTGTTCG  150

seq1  AAACCATGACACTTTTTTTTCGAAGATTTATTTATTTATGTGTAAGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGACACTTTTTTTTCGAAGATTTATTTATTTATGTGTAAGTACA  200

seq1  CTGTAACTGTCTTCAGATACCCCAGAAGAGGGCATCAAATATCATCACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACTGTCTTCAGATACCCCAGAAGAGGGCATCAAATATCATCACAG  250

seq1  ATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTCA  300

seq1  GAAGAGCAGTCAGTGCTCTTTAACTGCTGAGCCATCTCTCCAGCCCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCAGTCAGTGCTCTTTAACTGCTGAGCCATCTCTCCAGCCCACAA  350

seq1  ATGTAAATGTTCTATTGGGTTGCTTTTTGTTCTAATGTCTTGGAGACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATGTTCTATTGGGTTGCTTTTTGTTCTAATGTCTTGGAGACAGT  400

seq1  GTCTTTGTGGCATAGGCTGGTCTTCATTTCCTAGGCTTAAGTAATCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTGGCATAGGCTGGTCTTCATTTCCTAGGCTTAAGTAATCTTTC  450

seq1  TATTTAATAAAAATAAAAGTTAAAGACTTGGTGTAGTGACACATGCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATAAAAATAAAAGTTAAAGACTTGGTGTAGTGACACATGCCAGC  500

seq1  AATTTCAGCATTGAGCAGTGCAGAATCAAGACTGGTTCAGATACATAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGCATTGAGCAGTGCAGAATCAAGACTGGTTCAGATACATAGCA  550

seq1  AGCCTAAGGCCAATAATGGACTGCATAAAACCCTGTCTCAAGAAGCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAAGGCCAATAATGGACTGCATAAAACCCTGTCTCAAGAAGCAAAA  600

seq1  AGTGCAAGAGTGGCCATATCACATACATGCTTGATGGAAATCTCTATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAGAGTGGCCATATCACATACATGCTTGATGGAAATCTCTATATA  650

seq1  TTTTCCTAGTCATAGAACTGGAATTC  676
      ||||||||||||||||||||||||||
seq2  TTTTCCTAGTCATAGAACTGGAATTC  676

seq1: chr13_112077881_112078968
seq2: B6Ng01-010D11.g_67_1160

seq1  GAATTCCTTAACACTCCCCTCCCCAAACAAAGGGTTCATTCTGAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAACACTCCCCTCCCCAAACAAAGGGTTCATTCTGAAAAACA  50

seq1  ATATGGAGAATCCTATAAACGCTAAAAATGGCACGCTATATGCCCCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAGAATCCTATAAACGCTAAAAATGGCACGCTATATGCCCCAGTA  100

seq1  ATCTCACTAGTGAACACAGAGCCAAAGAAAACAGAACCAGAGAGCATCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACTAGTGAACACAGAGCCAAAGAAAACAGAACCAGAGAGCATCAA  150

seq1  AGAGATACCTACATCCCCTTCATTATTGTGTTACCATTCACAATAGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATACCTACATCCCCTTCATTATTGTGTTACCATTCACAATAGCCAA  200

seq1  ATATAAAATCAACATGGGTGCCCATCAGTGCACAAGTGAATAAACCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAATCAACATGGGTGCCCATCAGTGCACAAGTGAATAAACCAAGA  250

seq1  TGCAGGACAGGTGTACAGTGGGCTACTCTTCATCCACTAAGAAGTAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGACAGGTGTACAGTGGGCTACTCTTCATCCACTAAGAAGTAAAGG  300

seq1  TTGTCATTTGTGTCCAGGGAGAGCTGTAAGCCATCCTGTTAAATTTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCATTTGTGTCCAGGGAGAGCTGTAAGCCATCCTGTTAAATTTACTA  350

seq1  AGCCAGGCACAGAGGACAGGCGTTGCATGTTCTCATTTGTGGAAACTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCACAGAGGACAGGCGTTGCATGTTCTCATTTGTGGAAACTAAA  400

seq1  ATATCCATGATATAGAAGACAGCGGAACACTGACAAGAGAGACTGAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATGATATAGAAGACAGCGGAACACTGACAAGAGAGACTGAGAAG  450

seq1  AAGGAGAAGAAGAAGTACGCAAGGAGGTTTAGGAAGAAGACACTAAGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAGAAGAAGTACGCAAGGAGGTTTAGGAAGAAGACACTAAGCAC  500

seq1  CGTTAAGTGGAAAGAAATGGTTCTGGTGTCCCATTGGCAAGGCTGACTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAAGTGGAAAGAAATGGTTCTGGTGTCCCATTGGCAAGGCTGACTAT  550

seq1  GGCCTAGAACCTGTGATATCTTTCCATAACAAGCGATCTTAAGCACATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGAACCTGTGATATCTTTCCATAACAAGCGATCTTAAGCACATAG  600

seq1  AGATGATTCATGCTTGCATACATGGAAATGCCAGCTGCCCTGAGTTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATTCATGCTTGCATACATGGAAATGCCAGCTGCCCTGAGTTGCTC  650

seq1  ATTATTCTTCGTGTGCCTGTAACTGAACTGTTAAGTTAGATTTCACAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTCGTGTGCCTGTAACTGAACTGTTAAGTTAGATTTCACAAAC  700

seq1  ATCTTAGCCATTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGCCATTCTCACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGAT  750

seq1  TTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCT  800

seq1  CTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCC  850

seq1  CATTTTTT-AAGGGGGTTATTTGATTTTCTGAGGTCCACCTTCTTGAGTT  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTAAAGGGGGTTATTTGATTTTCTGAGGTCCACCTTCTTGAGTT  900

seq1  CTTTATATATGTT-GGATATTAGTCCCC-TATCTGATTT-AGGA-TAGGT  945
      ||||||||||||| |||||||||||||| |||||||||| |||| |||  
seq2  CTTTATATATGTTGGGATATTAGTCCCCTTATCTGATTTAAGGATTAGTA  950

seq1  AAAGATCCTTTCCCAGTCTGTTGGTGGTCTTTTTGTCTTATAGACAGT-G  994
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAAGATCCTTTCCCAGTCTGTTGGTGGTCTTTTTGTCTTATAGACAGTGG  1000

seq1  TCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTG-TCAA  1043
      ||||||| |||||||||||||| ||  |||||||||||||||||| ||||
seq2  TCTTTTG-CTTGCAGAAACTTTTGAAGTTCATTAGGTCCCATTTGCTCAA  1049

seq1  TTCTCGATCTTACAGCACAAGCCATTGCT-GTTCTGTTCAGGAATT  1088
      |||||||||||||||||||||| | |||| |||||||| |||||||
seq2  TTCTCGATCTTACAGCACAAGCTAATGCTGGTTCTGTT-AGGAATT  1094