BAC Information

Click to search

BAC

Clone NameB6Ng01-010O12
Chromosome13 (Build37)
Map Location 19,151,136 - 19,151,651
singlet/doubletsinglet
Overlap geneAmph
Upstream gene4930448F12Rik, Pou6f2, Vps41
Downstream geneLOC624044, Tcrg-V4, LOC624071, Tcrg, Tcrg-C, Stard3nl, Epdr1, Sfrp4, Txndc3, A530099J19Rik, Gpr141, LOC432730
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010O12.bB6Ng01-010O12.g
ACCDH846440DH846441
length1,194809
definitionDH846440|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O12, 5' end.DH846441|Mus musculus domesticus DNA, BAC clone: B6Ng01-010O12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaccagagggctcctaaacctgatgaacaacttcagcaaagtgg
ctgcatataaaattaccttaaacaaatcagtagccttcctctacttaagg
acaaataggctgagaaagaaatgacggaaatgacacccttcacaatagtc
acaaataatattagataccttggtgtgactctaaccaagcaagtgaaaga
tctgtatgacaagaatttcaagtctctgaagaaagaaatttaacagaagg
tggaaagatctcccatgctcatggattgacaggatgaatataataaaatt
ggccatcttgccaaaagcaatctacagattcaatgcaatccccattaaaa
ttccaactcaattcttcatagaattagaaacagcaatttgcaaattcatt
tggaataacaaaaaatctaggaaagcaaaaactattctcaacaaaagaac
ttctggggaaatcaccatccctaacctcaagctgtattacagagcaatag
tgataaaaactttatggtattggtacagagagaggcaggatagatcagtg
gaaaagaattgaagacccagaaatgaacttacacacctctggtcacttga
tctttgacaaaggcggtaaacccattcagttggaaaaaagacagcatttt
caacaaatggtgctggttcaactggcagttatcagtagaagaaggcaaat
ggatccattcttatctccttgtacaaagcttatgtccaagtggatcaaga
accgccatataaaaccagatcactgaaactaataaagagaaagtggggaa
tagccttgacacatgggcatgggggggaaatttcctgacagaacaaaaat
ggcttatgctgaaagattaagattcaaaaaatgggaactcataaaactgc
aaagaattctctaaggcaaagaaaactgtcaattagacaaaaaggcaacc
acagattgggaaaattccttcttcatcttcttctattgaggggctaaatc
cattaataaaagtactcatgaattagactcctgagactaataatcctatt
taaaatggggacggactaaacagaatagttttactgggagaatctgaatg
gtctataagaccctaagaatgggtcaacttctttatctaccgaactatat
caaatgtgacctggaattccctccatcacagtccaatgggctta
gaattctctgttaaagaattggcatcacccgactggcccatgaacctttg
tgggccattttctatttttttttctattttttttccattttttattaggt
atttagcttatttacatttccaatgctataccaaaagtcccccttaccca
cccacccccactcccctaccaacccacctcccctttttggccctggcgtt
cccctgtactggggcatataaagtttgcgtgtccaatgggcctctctttc
cagtgatggccgactaggccatcttttgatacatatgcagctagagtcaa
gagctccggggtactggttagttcataatgttgttccacctatagggttg
cagatccctttagctccttgggtactttctctagctcctccattgagagc
cctgtgatgcatccattagctgactgtgagcatccacttctgtgtttgct
agggcccggcatagtctcacaagagacagctaaatctgggtcctttagat
aaaatcttgctagtgtatgcaatggtgtcagagtttggatgctgattatg
gggtggatccctggatatggcagtctctagatggtccatcctttcatctc
agctccaaactttgtttctgtaactccttccatgggtgttttgttcccac
ttctaagagagggtcatagtgtccacacttcagtcttcatttttcttgag
tttcatgtgtttaggaaattgtatcttatatcttgggtatcctaggtttg
ggctaatattccacttatcagtgagtacatattgtgtgagttcctttgtg
gatgtgtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_19151136_19151651
seq2: B6Ng01-010O12.g_125_630

seq1  TTTTCTATTTTTTTTTTTTTTGGTATTTTTTTTCTTTCCATTTTTTATTA  50
      ||||||||||||||||       |||||||    ||||||||||||||||
seq2  TTTTCTATTTTTTTTT------CTATTTTT----TTTCCATTTTTTATTA  40

seq1  GGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATAC  100
      ||||||||||| |||||||||||||||||||||||||||||||||| |||
seq2  GGTATTTAGCTTATTTACATTTCCAATGCTATACCAAAAGTCCCCCTTAC  90

seq1  CCACCCACCCCCACTCCCCTACCCGCCCACTCCCCCTTTTTGGCCCTGGC  150
      |||||||||||||||||||||||  |||||  ||||||||||||||||||
seq2  CCACCCACCCCCACTCCCCTACCAACCCACCTCCCCTTTTTGGCCCTGGC  140

seq1  GTTCCCCTGTTCTGGGGCATATAAAGTTTGTGTGTCCAATGGGCCTCTCT  200
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  GTTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCT  190

seq1  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGT  240

seq1  CAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGATCCACCTATAGGG  300
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGG  290

seq1  TTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGG  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGAG  340

seq1  AGCCCTGTGATCCATCCATTAGCTGACTGTGGGCATCCACTTCTGTGTTT  400
      ||||||||||| ||||||||||||||||||| ||||||||||||||||||
seq2  AGCCCTGTGATGCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTT  390

seq1  GCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTC  450
      |||||| |||||||||||||||||||||||||||| ||||||||||||| 
seq2  GCTAGGGCCCGGCATAGTCTCACAAGAGACAGCTAAATCTGGGTCCTTTA  440

seq1  GATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGCTGATT  500
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATAAAATCTTGCTAGTGTATGCAATGGTGTCAGAGTTTGGATGCTGATT  490

seq1  ATGGGGTGGATCCCTG  516
      ||||||||||||||||
seq2  ATGGGGTGGATCCCTG  506