BAC Information

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BAC

Clone NameB6Ng01-011F19
Chromosome13 (Build37)
Map Location 38,412,374 - 38,569,485
singlet/doubletdoublet
Overlap geneBmp6
Upstream geneLy86, LOC100042794, LOC100042800, LOC100042802, LOC100041624, Rreb1, Ssr1, Cage1, Riok1, Dsp, 6530403A03Rik
Downstream geneTxndc5, Muted, Eef1e1, LOC621102, Slc35b3, EG666867, LOC100041779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011F19.bB6Ng01-011F19.g
ACCDH846769DH846770
length735904
definitionDH846769|Mus musculus domesticus DNA, BAC clone: B6Ng01-011F19, 5' end.DH846770|Mus musculus domesticus DNA, BAC clone: B6Ng01-011F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,412,374 - 38,413,108)(38,568,782 - 38,569,485)
sequence
gaattcggagttgaaagacctcaaccccagagagcgccttttctcccctg
tgggtcattacgcaatgtgtctccttgcttacctttccggtcttccctgc
acacacatgagcggggctgtcatttggcagatggagtctctgagttacgt
caacaccttcctcagagcccgctgcaggctcaggctgggagctttccttc
ttggatgtttattttacgtaagtactgactgccttctcagactttttttt
tttttttaattgtgttgatatatttctcactcaaataaacccaaaatagg
ataggggttgatttaaatgtttgcaccttcccacgtgataatgacagtag
ctccgtcaactggttctgtgtctgttttggcttttcccagtggctgttcc
taaaatgagtctacgagtttagaccttaccaaatggaaagcaggccccgg
cttcgacagggaatctttttggttgtttattaacgttatacatatccttt
gcacttttaccttcattttttcccctgttatttccttatctattaaaatg
ttgagggtaggacctaggtaagcaccctgctatgttgtattcttagctct
ctctctctttttattacttactgcttaaatttgagaaatgccccagcttt
cccatacaggggcaaatggaaggaggatacagaaaaaaattgttcacatg
tatgaagtatagttttgtgtgtgtgtgtttttttt
gaattcctacaatcaatacactaaagcagaaagcagaagctgggcatact
atcaccagctaaggataaaaattgatgatgatgatgacaacgacgacgac
gatgacgacgagttgaaggtatctaggataggaaagaggaaggtctcaaa
ggaaccagcctgcctggaagtgaccatgtaaacatgttctcacacaggtg
tgagttcagttttcttcttccaagttctggctaccatgaacaccaatatt
ttcatttgagatatttgccaaatattaagctgtgtatacacaggatagga
agctgagaaaacaagaagaaagacgctgtttagcagcttcagaggaaaag
ggggattttgttggcagtttccgcaatgctgggggagttaaaaatgagag
ttcagagcccaccaaggaggagggcctctgctaagcgtcctagtcttggc
tgaaacccccagggggctaagcagcaagaggaagggggaaaccagaaaca
gatgagccttagcaaacccggaagccccgcctcctcgaggacaaaaggat
caagcaatgggcttgcactgcctctgacttccaggagaatgttaaaccca
gtcagcacgaaagcgacaatgtccatagcaggttttattaaattatacac
aaaaatttaataagcaaaaagctgtcaggcaagtcaggaaataaaatcaa
atgcagaaagcaatcaagggaataaaaagatgaagtaaatagacccagag
gtgatccagacactagaaccagacctagtctctaaatccaagcttacata
atggttacagatcacaaatggaatttgtttcttgggtctaaaaatagcct
tagtatttgaaatgtattgatactataaaggattaaaaccacattaatcc
tatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_38412374_38413108
seq2: B6Ng01-011F19.b_41_775

seq1  GAATTCGGAGTTGAAAGACCTCAACCCCAGAGAGCGCCTTTTCTCCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCGGAGTTGAAAGACCTCAACCCCAGAGAGCGCCTTTTCTCCCCTG  50

seq1  TGGGTCATTACGCAATGTGTCTCCTTGCTTACCTTTCCGGTCTTCCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCATTACGCAATGTGTCTCCTTGCTTACCTTTCCGGTCTTCCCTGC  100

seq1  ACACACATGAGCGGGGCTGTCATTTGGCAGATGGAGTCTCTGAGTTACGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATGAGCGGGGCTGTCATTTGGCAGATGGAGTCTCTGAGTTACGT  150

seq1  CAACACCTTCCTCAGAGCCCGCTGCAGGCTCAGGCTGGGAGCTTTCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCTTCCTCAGAGCCCGCTGCAGGCTCAGGCTGGGAGCTTTCCTTC  200

seq1  TTGGATGTTTATTTTACGTAAGTACTGACTGCCTTCTCAGACTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGTTTATTTTACGTAAGTACTGACTGCCTTCTCAGACTTTTTTTT  250

seq1  TTTTTTTAATTGTGTTGATATATTTCTCACTCAAATAAACCCAAAATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAATTGTGTTGATATATTTCTCACTCAAATAAACCCAAAATAGG  300

seq1  ATAGGGGTTGATTTAAATGTTTGCACCTTCCCACGTGATAATGACAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGTTGATTTAAATGTTTGCACCTTCCCACGTGATAATGACAGTAG  350

seq1  CTCCGTCAACTGGTTCTGTGTCTGTTTTGGCTTTTCCCAGTGGCTGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGTCAACTGGTTCTGTGTCTGTTTTGGCTTTTCCCAGTGGCTGTTCC  400

seq1  TAAAATGAGTCTACGAGTTTAGACCTTACCAAATGGAAAGCAGGCCCCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAGTCTACGAGTTTAGACCTTACCAAATGGAAAGCAGGCCCCGG  450

seq1  CTTCGACAGGGAATCTTTTTGGTTGTTTATTAACGTTATACATATCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGACAGGGAATCTTTTTGGTTGTTTATTAACGTTATACATATCCTTT  500

seq1  GCACTTTTACCTTCATTTTTTCCCCTGTTATTTCCTTATCTATTAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTTTACCTTCATTTTTTCCCCTGTTATTTCCTTATCTATTAAAATG  550

seq1  TTGAGGGTAGGACCTAGGTAAGCACCCTGCTATGTTGTATTCTTAGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGTAGGACCTAGGTAAGCACCCTGCTATGTTGTATTCTTAGCTCT  600

seq1  CTCTCTCTTTTTATTACTTACTGCTTAAATTTGAGAAATGCCCCAGCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTTTATTACTTACTGCTTAAATTTGAGAAATGCCCCAGCTTT  650

seq1  CCCATACAGGGGCAAATGGAAGGAGGATACAGAAAAAAATTGTTCACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACAGGGGCAAATGGAAGGAGGATACAGAAAAAAATTGTTCACATG  700

seq1  TATGAAGTATAGTTTTGTGTGTGTGTGTTTTTTTT  735
      |||||||||||||||||||||||||||||||||||
seq2  TATGAAGTATAGTTTTGTGTGTGTGTGTTTTTTTT  735

seq1: chr13_38568782_38569485
seq2: B6Ng01-011F19.g_65_769 (reverse)

seq1  TGCATTTGATTTTATTTCCTGACTTGCCTGACAGCTTTTTGCTTATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGATTTTATTTCCTGACTTGCCTGACAGCTTTTTGCTTATTAAA  50

seq1  -TTTTGTGTATAATTTAATAAAACCTGCTATGGACATTGTCGCTTTCGTG  99
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGTATAATTTAATAAAACCTGCTATGGACATTGTCGCTTTCGTG  100

seq1  CTGACTGGGTTTAACATTCTCCTGGAAGTCAGAGGCAGTGCAAGCCCATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGGGTTTAACATTCTCCTGGAAGTCAGAGGCAGTGCAAGCCCATT  150

seq1  GCTTGATCCTTTTGTCCTCGAGGAGGCGGGGCTTCCGGGTTTGCTAAGGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATCCTTTTGTCCTCGAGGAGGCGGGGCTTCCGGGTTTGCTAAGGC  200

seq1  TCATCTGTTTCTGGTTTCCCCCTTCCTCTTGCTGCTTAGCCCCCTGGGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTTTCTGGTTTCCCCCTTCCTCTTGCTGCTTAGCCCCCTGGGGG  250

seq1  TTTCAGCCAAGACTAGGACGCTTAGCAGAGGCCCTCCTCCTTGGTGGGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCCAAGACTAGGACGCTTAGCAGAGGCCCTCCTCCTTGGTGGGCT  300

seq1  CTGAACTCTCATTTTTAACTCCCCCAGCATTGCGGAAACTGCCAACAAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCTCATTTTTAACTCCCCCAGCATTGCGGAAACTGCCAACAAAA  350

seq1  TCCCCCTTTTCCTCTGAAGCTGCTAAACAGCGTCTTTCTTCTTGTTTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTTTTCCTCTGAAGCTGCTAAACAGCGTCTTTCTTCTTGTTTTCT  400

seq1  CAGCTTCCTATCCTGTGTATACACAGCTTAATATTTGGCAAATATCTCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCTATCCTGTGTATACACAGCTTAATATTTGGCAAATATCTCAA  450

seq1  ATGAAAATATTGGTGTTCATGGTAGCCAGAACTTGGAAGAAGAAAACTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATATTGGTGTTCATGGTAGCCAGAACTTGGAAGAAGAAAACTGA  500

seq1  ACTCACACCTGTGTGAGAACATGTTTACATGGTCACTTCCAGGCAGGCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACCTGTGTGAGAACATGTTTACATGGTCACTTCCAGGCAGGCTG  550

seq1  GTTCCTTTGAGACCTTCCTCTTTCCTATCCTAGATACCTTCAACTCGTCG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTTGAGACCTTCCTCTTTCCTATCCTAGATACCTTCAACTCGTCG  600

seq1  TCATCGTCGTCGTCGTTGTCATCATCATCATCAATTTTTATCCTTAGCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGTCGTCGTCGTTGTCATCATCATCATCAATTTTTATCCTTAGCTG  650

seq1  GTGATAGTATGCCCAGCTTCTGCTTTCTGCTTTAGTGTATTGATTGTAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGTATGCCCAGCTTCTGCTTTCTGCTTTAGTGTATTGATTGTAGG  700

seq1  AATTC  704
      |||||
seq2  AATTC  705