BAC Information

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BAC

Clone NameB6Ng01-013L04
Chromosome13 (Build37)
Map Location 66,124,332 - 66,125,437
singlet/doubletsinglet
Overlap genenone
Upstream gene4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746
Downstream geneLOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013L04.bB6Ng01-013L04.g
ACCDH848450DH848451
length1,082489
definitionDH848450|Mus musculus domesticus DNA, BAC clone: B6Ng01-013L04, 5' end.DH848451|Mus musculus domesticus DNA, BAC clone: B6Ng01-013L04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaatgaatgcttttcatagttatcctagtcacagcttctcaaa
tcactttttttccagtttttttttttaagacaggatttattgtctaatgc
tggctgtcctggactcattttgtactctaggctacctcaaactcacagag
gtcctcttgtctctgcctccccaggaattaaaggcatgtgtcatgacacc
tggcttcaaatcacttttactgcttgtaaaagggaaggttctgagttttc
taagaggatccctatgaagtggtagaggcagaggcaggactcacttgaaa
ggcctgcctggactatctaatatgttttggaaccatgtagagagactttg
cctctcataaatgaataaataaatatagaaaaacatattcatccatctat
acatgcatgtgcatgcggtggctcagagggcaaagctgctggcagttaag
gtctaggtcaaatagtaagacctagatggaatgtgaagccttaggtcaga
ttcgttaaggactaggtaactcttacctggttactctgccattttctgcg
gttactaatattacaaggacactttgtcatatgatgcttctgcagttact
cccagagttgattacctattctgttgggttctgcttcctcagaagaccaa
tcacaatagaagctggtcaacctgcttcctttgttctatagttaccctga
ataagctttggactggaacagaccacccagcagcatttcctgcacccacc
tatgtatacgcttttatggcttatgctcttataagctgccctggaatgga
tgccaacataagagagaaacctgcaccgatttgatgggttctagtaaagt
gtaagttccaagactttcccaggaactgacatcctacttggatgtgggca
tgtgcatgtggagatgtacatgtgggcactgacttctggtggcaagtgag
acatgacgttagacagcagtcccctgtcacagtcaatacacactatggga
gagcaaatacataagtacaatagattacatataactcacaaagtactgtg
agaatttattcaagggtgggaatagcaatata
agagatctgtgtatccctgtttattgaatgctgggataaaaagcatggaa
aaccatgcctggacttaagcttttcttcacctaaaattctgcaccaggat
gacttgatccagattatctgcttgactcttttctcctgggattaacagca
tgtaccaccatgcctgaacctaagaatttccatctagatgttaaattgaa
aactcagaacaggaatcacactccatcccttgttaatttgaaaaatattt
atatctccttatgtccacatgaaaagaataaccaggtaacaatcattact
aatgtgatacagttctccttaccaaaactgcaaatccataagtttagctg
gatggaatcttgccttaacatcacctttcccttaatgtcatataatattt
ttgatcataagatttaggttcattcaacttccaagtgagtctgtcttcct
tcctccttcctcctctcctctcctctccactccactcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66124332_66125437
seq2: B6Ng01-013L04.b_45_1126

seq1  GAATTCTTAATGAATGCTTTTCATAGTTATCCTAGTCACAGCTTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGAATGCTTTTCATAGTTATCCTAGTCACAGCTTCTCAAA  50

seq1  TCACTTTTTTTCCAGTTTTTTTTTTTAAGACAGGATTTATTGTCTAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTTTTCCAGTTTTTTTTTTTAAGACAGGATTTATTGTCTAATGC  100

seq1  TGGCTGTCCTGGACTCATTTTGTACTCTAGGCTACCTCAAACTCACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTGGACTCATTTTGTACTCTAGGCTACCTCAAACTCACAGAG  150

seq1  GTCCTCTTGTCTCTGCCTCCCCAGGAATTAAAGGCATGTGTCATGACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTTGTCTCTGCCTCCCCAGGAATTAAAGGCATGTGTCATGACACC  200

seq1  TGGCTTCAAATCACTTTTACTGCTTGTAAAAGGGAAGGTTCTGAGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCAAATCACTTTTACTGCTTGTAAAAGGGAAGGTTCTGAGTTTTC  250

seq1  TAAGAGGATCCCTATGAAGTGGTAGAGGCAGAGGCAGGACTCACTTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGATCCCTATGAAGTGGTAGAGGCAGAGGCAGGACTCACTTGAAA  300

seq1  GGCCTGCCTGGACTATCTAATATGTTTTGGAACCATGTAGAGAGACTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCCTGGACTATCTAATATGTTTTGGAACCATGTAGAGAGACTTTG  350

seq1  CCTCTCATAAATGAATAAATAAATATAGAAAAACATATTCATCCATCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATAAATGAATAAATAAATATAGAAAAACATATTCATCCATCTAT  400

seq1  ACATGCATGTGCATGCGGTGGCTCAGAGGGCAAAGCTGCTGGCAGTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATGTGCATGCGGTGGCTCAGAGGGCAAAGCTGCTGGCAGTTAAG  450

seq1  GTCTAGGTCAAATAGTAAGACCTAGATGGAATGTGAAGCCTTAGGTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGTCAAATAGTAAGACCTAGATGGAATGTGAAGCCTTAGGTCAGA  500

seq1  TTCGTTAAGGACTAGGTAACTCTTACCTGGTTACTCTGCCATTTTCTGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTAAGGACTAGGTAACTCTTACCTGGTTACTCTGCCATTTTCTGCG  550

seq1  GTTACTAATATTACAAGGACACTTTGTCATATGATGCTTCTGCAGTTACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAATATTACAAGGACACTTTGTCATATGATGCTTCTGCAGTTACT  600

seq1  CCCAGAGTTGATTACCTATTCTGTTGGGTTCTGCTTCCTCAGAAGACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTTGATTACCTATTCTGTTGGGTTCTGCTTCCTCAGAAGACCAA  650

seq1  TCACAATAGAAGCTGGTCAACCTGCTTCCTTTGTTCTATAGTTACCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATAGAAGCTGGTCAACCTGCTTCCTTTGTTCTATAGTTACCCTGA  700

seq1  ATAAGCTTTGGACTGGAACAGACCACCCAGCAGCATTTCCTGCACCCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCTTTGGACTGGAACAGACCACCCAGCAGCATTTCCTGCACCCACC  750

seq1  TATGTATACGCTTTTATGGCTTATGCTCTTATAAGCTGCCCTGGAATGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATACGCTTTTATGGCTTATGCTCTTATAAGCTGCCCTGGAATGGA  800

seq1  TGCCAACATAAGAGAGAAACCTGCACCGATTTGATGGGTTCTAGTAAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACATAAGAGAGAAACCTGCACCGATTTGATGGGTTCTAGTAAAGT  850

seq1  GTAAGTTCCAAGACTTTCCCAGGAACTGACATCCTACTTGGATGTGGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTCCAAGACTTTCCCAGGAACTGACATCCTACTTGGATGTGGGCA  900

seq1  TGTGCATGTGGAGATGTACATGTGGGCAACTGACTTCCTGGTTGGCAAGT  950
      ||||||||||||||||||||||||||| |||||||| |||| ||||||| 
seq2  TGTGCATGTGGAGATGTACATGTGGGC-ACTGACTT-CTGG-TGGCAAG-  946

seq1  TGAGACATGAACGTTAGACAAGGCAAGTCCCCCTGTCACAGTCAAATACA  1000
      ||||||||| ||||||||||  || ||| |||||||||||||| ||||||
seq2  TGAGACATG-ACGTTAGACA--GC-AGT-CCCCTGTCACAGTC-AATACA  990

seq1  CCAACTAATGGGAGAAGCATAATACCATAAGTTACAATAGATTTAACATA  1050
      |  ||| ||||||| |||| |||| |||||| |||||||||||  |||||
seq2  C--ACT-ATGGGAG-AGCA-AATA-CATAAG-TACAATAGATT--ACATA  1031

seq1  TAAACTCACAAAGTACTGTGAGAATATTTATTCAGGGGTTGGGAATAAGC  1100
      | |||||||||||||||||||||  ||||||||| ||| ||||||| |||
seq2  T-AACTCACAAAGTACTGTGAGA--ATTTATTCAAGGG-TGGGAAT-AGC  1076

seq1  AATATA  1106
      ||||||
seq2  AATATA  1082