BAC Information

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BAC

Clone NameB6Ng01-014F18
Chromosome11 (Build37)13 (Build37)
Map Location 87,248,369 - 87,254,606100,685,551 - 100,686,582
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc, Dhx40, Ypel2, Gdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c
Downstream geneTex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464, Dynll2, Sfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014F18.bB6Ng01-014F18.g
ACCDH848930DH848931
length7941,032
definitionDH848930|Mus musculus domesticus DNA, BAC clone: B6Ng01-014F18, 5' end.DH848931|Mus musculus domesticus DNA, BAC clone: B6Ng01-014F18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(87,248,369 - 87,254,606)(100,685,551 - 100,686,582)
sequence
gaattccaggacagctggggctacacagagaaaccctgctttgaagacac
ctcccccccccccccaatgttactgagttttgtatatttacttttatatg
ctactttgctgcatttatttccctgttgtgagaatctttgggtgaaatat
ttagggttttctgtgtgtagaatagtatcatctgcacacagggatagttt
ggctcttgtccttttattgtctctttttcatctctttaaattgttacagc
tagagtttcaagtattgtgttaatcagaatgtgaagtctgtctggttcct
gttcttagattaagtgctttcatttttgttgtgtttgataggatgtctgt
gaatttatcatatccatcctttagtgtgttgcagcatctttctagacata
attattgggggggggttaccatgaaggtattgaattttaccagacttaat
tcttgatctattgagatgattatgtaatatttattcttgagtatatttat
atgctgttagttattagtgatattagaccattctcacacattggaatgaa
attcactagatcatggtatgcaatctctcttaagatttcttttcagctga
ataaatatagattaaggaaaagtgagaaagaattcaagagagtatgacaa
gttacaagggataatacttatttaattccatctgcaaatattttattgaa
atctcttttgtatgtagcaaggatgttggtccatagttgtctttacttgt
gccaggttttggaaggtcatactggcttcagagagtgggttgga
gaattctaagttgttctccagggtttggcaggttgcatttctcagtgtga
acatcaactttctgagcattcaacaggtctggctgttttaagtgaaaggt
tttcagttttggactatgatctgcctggttgcccatcagagatcaagctc
ctggataggcaggagagccctttcaagggctacagttggaggaagaaaaa
agatcacagcctgtgtgacatataccccgccatgcctgactgaggagaga
cgcctgaggaaacacagctgtggacacccacagagctttatgctcaaata
caaatatcattttctgccatctgcacccttggccatggtggccctggttg
aaggcattgctggtagacatggcctttacccggtgccccgtcatgtggga
tagactggtaagtctagctttgcccacggcagccatcagagacccacaat
ctctcccagcatgtgctgataaaatttcttagctgagaatgaaaacaaca
agtaaacaaggcttcaaacgaagctgtcaagtcgcttcatttcctattat
gtgtttttatttctgaaggaagaatatgcacaggacagtacagagcttct
aaacaccattacttgtttcctaaaaatttttccagtttctcacagaagaa
ttctgacactctcaacgcatttcagaggaaatctgttttgtcctcatcta
ctctctccccacctagaactctgtaaacatacttcttagctctgcaggcc
cagataggaaagggagaaagatcatcgacatgtgaacatcaagagtgggc
tgggaggaaaacagacagtagtggctcttgcaaaacttctgcagcccgct
gtctggtaccaaagtccgaagccaggagcacatatttagggggactctaa
agtggaaagatcctaatttggcgtgcagagataaagctgcttgaatcctt
ttttaaaaaatagcaaatttggggcctcatcctaacaatcctgactactg
ggcgcaaggtggtagccagggaaagggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_87248369_87254606
seq2: B6Ng01-014F18.b_49_685

seq1  TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAACAAA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAAAACAAAACAAAAAAAGAGAGAACAAGAGTAAGAGGAGGGGGCAAG  100
                                                        
seq2  --------------------------------------------------  0

seq1  CACCCCTGTTTGTAGTGGGTCAGGCCTACCTGGCTATTGCAAGGTAACTG  150
                                                        
seq2  --------------------------------------------------  0

seq1  TCGGGAGGGAGCATACCTGGCAGTTGCCAGGTAATTGTGGGATTGAGTTT  200
                                                        
seq2  --------------------------------------------------  0

seq1  AGACAGCATGCTAACAAAGAGTACATACTACTGTTTCAGAAGACCCATAC  250
                                                        
seq2  --------------------------------------------------  0

seq1  TAGATAGCTCATGATAGCTTGTAACAGTAACTCCAGGAAATCTGACTCCT  300
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCCTTCCATAGGTATCTGGGCTCCTTGGCTCATACCTTTAATCCCAGC  350
                                                        
seq2  --------------------------------------------------  0

seq1  ACTTGGGAAGCAGAGGTAGGTGGATTTCTGTAAATTTGAAGCCAACCTGA  400
                                                        
seq2  --------------------------------------------------  0

seq1  TCTACACATCAAATGTGAGGATAGCCAGGGATACAGAGAAACCGTGTCTT  450
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAAACCAAAACAGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGA  500
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCTCTTCCTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCAC  550
                                                        
seq2  --------------------------------------------------  0

seq1  ATGGTGGCTCACAACCATCCTTAATGAGATCTGATGCCCTCTTCTGGAGT  600
                                                        
seq2  --------------------------------------------------  0

seq1  GTCTGAAGACAGCTACAATGTACTTACATATAATAAATAAATAAATAAAT  650
                                                        
seq2  --------------------------------------------------  0

seq1  AAATAAATAAATAAATAAATAAATAATATTTATTTATATAAATAAATAAA  700
                                                        
seq2  --------------------------------------------------  0

seq1  TAAATAAATTATTATATAAATAAATAATTATTATATAAATAAATTATTAT  750
                                                        
seq2  --------------------------------------------------  0

seq1  TTATATAAATAAATAAATAAATAATATTATTACATATAATAAATAAATAA  800
                                                        
seq2  --------------------------------------------------  0

seq1  ATCTTTAAAAAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGAGAGAGAGAG  850
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGAGAGAGAGAGAGAGAAAGACACCAAAACAAACAAAGTAATAAGACT  900
                                                        
seq2  --------------------------------------------------  0

seq1  AAAACTAGAACCAAACCAAGCCAAATAGAAAAGGATACAATACAACTGGG  950
                                                        
seq2  --------------------------------------------------  0

seq1  TGCTGAGTTGTAGGTTTCCAACAGGAAGGTAAATGTCACTTGTTCCCCTC  1000
                                                        
seq2  --------------------------------------------------  0

seq1  TATGTAATATTTTGTTTTTCATTTTGTAAATTTATTTTAAGTTATACGTG  1050
                                                        
seq2  --------------------------------------------------  0

seq1  CACAACAGGCAGAGGTGACAGACCCTCAGGAGTTGGAATTTCAGGTGGTT  1100
                                                        
seq2  --------------------------------------------------  0

seq1  TTGAGCCACCTGTGTGGGTTCTGGTCTTCCAGGAAACCATCTCTCCAACC  1150
                                                        
seq2  --------------------------------------------------  0

seq1  TCCAATATTTTGCTTTTCTTTAGCTTTCTTCAGAGTTTCTCTTCTTTATT  1200
                                                        
seq2  --------------------------------------------------  0

seq1  TCCCCCCAGTGGTTTCCCTGTGGTGTATCTTTCATTCCCCCTTCTCCTTT  1250
                                                        
seq2  --------------------------------------------------  0

seq1  CCCATGTCTTCTCTGTACTGACCGAGACCTCGAAACATTCAAGGCCTTCA  1300
                                                        
seq2  --------------------------------------------------  0

seq1  GTTTTCTTTTTCAGATTGTGTGAGGAGCCATATTTGTGCATAGTGTGTGA  1350
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTGCACAGGCAGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGG  1400
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTTCTCTGCCTGCTTTCCTCCTTTGAGACAGGCTCTCTTATTGAAGTT  1450
                                                        
seq2  --------------------------------------------------  0

seq1  GGAGCTTGCCTTGCTTTTGGCTACCCTGTCTCTCCCCATCCTGCTGGGGT  1500
                                                        
seq2  --------------------------------------------------  0

seq1  TACAGGTGTTTGTGGAGATAGTGCTCCCTTGTCTCTGATCATTGTAACAA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  TAATACAGAGAAAAAGAGGTTGTCATTTACAGAAGGACTCAGGAACAGTA  1600
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAGGGAAAAGAAACCAAAACAAAAACCGTCTAGTTGTTGGTGTTCTGG  1650
                                                        
seq2  --------------------------------------------------  0

seq1  GAAAGAGGGATATTGCAGGATGACTTGGGCCTTGCTGCCAGCAGAGGGAC  1700
                                                        
seq2  --------------------------------------------------  0

seq1  TAGCTCTGACAAATGAACACTGGCAGCTTAGCAGAAGCCCTTTTCTAGTT  1750
                                                        
seq2  --------------------------------------------------  0

seq1  TCACAAAAGGCACCTTAGCAAGCCAATCCAAATCCTAAAACCTCTTATCT  1800
                                                        
seq2  --------------------------------------------------  0

seq1  GATCTAGGGATGTCTGAAGGAATCATTACCCAAGGAGTTCTCAGCTTGAG  1850
                                                        
seq2  --------------------------------------------------  0

seq1  GAGACTTCCTGGTTTGCCTGGTATGTCTCTGGACTCAGGCAAAGGCTCTG  1900
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAGCCTTCGGAACAACCCATAAAACCTCAGATAACAATCACTGACTAT  1950
                                                        
seq2  --------------------------------------------------  0

seq1  TTACAAAAGGCTACTTCATAGCCTAGGTGCTATCGTTTCAGAATTCATGG  2000
                                                        
seq2  --------------------------------------------------  0

seq1  CAGATTCAATAGCTCTGCTAACATTCTGCTACATCTGGTCCTCATGTTCC  2050
                                                        
seq2  --------------------------------------------------  0

seq1  TACAGCAAGCTATCCTAAATGCTGAATCATCACTGCAGACATCCTTCTTT  2100
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAGATATTTATTTTAATGTCAGGGACACCATTCTCCAAGCCTCCCAGC  2150
                                                        
seq2  --------------------------------------------------  0

seq1  TGGCTTGTAGGGTGGGAGGGAGGCGGCAACACAGTCCTTAAGAGGTGAAG  2200
                                                        
seq2  --------------------------------------------------  0

seq1  AATGAGACTGGAGACAGCGCCATCTATGCAGGACTGGATCATACCCTTCA  2250
                                                        
seq2  --------------------------------------------------  0

seq1  GAAACTGGCCTAGTGGTTTACTTTCATTATATGTTTAAACATAGTAAATT  2300
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGAGGGGGCCTGGAGAGATGGCTCAGTGGTTAAGAGCACTGACTGCTC  2350
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCAGAGATCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAAC  2400
                                                        
seq2  --------------------------------------------------  0

seq1  CATCCTTAATGAGATCTGACACCCTCTTCTGGTGTGTCTGAAGACAGCTA  2450
                                                        
seq2  --------------------------------------------------  0

seq1  CAATGTACTCACATAAATAAATAAATCCTTCAAAAAACCAAAAATAAATA  2500
                                                        
seq2  --------------------------------------------------  0

seq1  AATAAATAAATCTTAAAAAAAAAAAAAAAAGAACTTTGAGGGAACAGTTT  2550
                                                        
seq2  --------------------------------------------------  0

seq1  CCATGTGACAGTCTCATAGCGAAGCTTCACGGCTGGCGATACTGAAATGT  2600
                                                        
seq2  --------------------------------------------------  0

seq1  CTTTGCAAAGTATCAAAGAACCTGTGACCTTTTACAATAAGAGTCAGTTT  2650
                                                        
seq2  --------------------------------------------------  0

seq1  TTGAGCTGATAATGAGAGTTCATGACTAGGGCCTAGTCCAGTGCACCTCA  2700
                                                        
seq2  --------------------------------------------------  0

seq1  ACCTTCCTAACGCTGCAACCCTTTAACTACAGTTCTTCATGGTGTGGTGG  2750
                                                        
seq2  --------------------------------------------------  0

seq1  CCCCAGCATAAAATTGCTTTTGTTGCTACTTTAGAGCTGTAATTTTGCTG  2800
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTTAAAATTGAAATGTAAATATCTGATAGGAAGGCTATCTGATTGAAC  2850
                                                        
seq2  --------------------------------------------------  0

seq1  TGCTGACTGTGAGAAGGGTCTGTGGTTAGCATAAGGATAGATTCTATTGG  2900
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAGAATGCAAAGTACATGGGACCTTTTTCATAGGGTTACGTTCTCTTT  2950
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGAGAGGCAGAGCTCAGGACATGGGGGTCAGGTGGAGGCTGCCTCCTA  3000
                                                        
seq2  --------------------------------------------------  0

seq1  ACTGATGAGCAGAGCTCAGGCTGCATTCATTCCCTTGCTTTGAAGAAAGT  3050
                                                        
seq2  --------------------------------------------------  0

seq1  AGGCAGGAGTGACTGACAATCCTGATTTCTCCAATGCTGTGCTTCATATG  3100
                                                        
seq2  --------------------------------------------------  0

seq1  TGTATGCGTGTTTTGTCTGTATGCCTGGAGCTAGAGGAAATAGAAGATCC  3150
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGAAACTGGAATTATTGATGGTTGTGACTGTTATGTGGGTGCTGGGAA  3200
                                               | |  ||  
seq2  -----------------------------------------TTCCAGG--  7

seq1  CCAAACCTGGGTCCTCTGGAAGAGCAGCTAGTGCTCTTAATTGCTCAGGC  3250
        | | ||||| |  |    |||| | |   |||| | ||          
seq2  --ACAGCTGGGGCTAC--ACAGAGAAAC-CCTGCTTTGAA----------  42

seq1  ATGTCACCATCCGTACCTCTCCTCTTGAGAATTTTTCATTGTGTAATCCA  3300
        | ||||  ||   || | || |            || |||    | | 
seq2  --GACACCTCCC---CCCCCCCCC------------CAATGT----TACT  71

seq1  GGGTGTTCTGTTCTCATTTTAGCTCAGGTTGCCCTCACACTTA-GTGCAG  3349
      | || || | |    ||||                 ||  |||  |||  
seq2  GAGTTTTGTAT----ATTT-----------------ACTTTTATATGC--  98

seq1  TCCTCTTGCTGTACCCTCCTGACCACTAGGAGTATGGGCACATTCCACCT  3399
      | || ||||||            || |     |||       ||||    
seq2  TACT-TTGCTG------------CATT-----TAT-------TTCC----  119

seq1  CACTTGCTCTTGAACTTTGGGT-TCTTCTTT----TTTTCTGAGTACCTG  3444
      |  ||| |    | ||||||||    | |||    ||||||| ||   | 
seq2  CTGTTG-TGAGAATCTTTGGGTGAAATATTTAGGGTTTTCTGTGT--GTA  166

seq1  GACTA-TATCA----CATCCAGTGATAGTCTCTGTCTGTCTGTCTGTCTG  3489
      || || |||||    ||  ||| |||||| |   |||   ||||  | | 
seq2  GAATAGTATCATCTGCACACAGGGATAGTTTGGCTCT---TGTCCTTTTA  213

seq1  TCTGTCTTTCTCTCCCCTCCCATATCTTTTACTTTTTTTTTTAAACCATC  3539
      | ||||| | | |       ||| ||||| | || ||         || |
seq2  T-TGTCTCTTTTT-------CATCTCTTTAAATTGTT--------ACAGC  247

seq1  AAGGAATTCAGTTTTTACTGGAGAGAAAAATCAATTAATGGTTAAAACAC  3589
       ||      ||||                 |||| || ||  | || || 
seq2  TAG------AGTT-----------------TCAAGTATTGTGTTAATCAG  274

seq1  AATACAGTAACAACATTCACATTTATGAGATTAAAGCACAATACAATAAC  3639
      |||   || |   |  ||   ||  ||   ||| |  | | | |  | | 
seq2  AAT---GTGAAGTCTGTCTGGTTCCTGTTCTTAGATTA-AGTGCTTTCAT  320

seq1  TTTACCATTTATGACAGAAACACACAAAAATGAGTATCTCTGGGTCAATA  3689
      |||     || ||   ||              || || ||||        
seq2  TTT---TGTTGTGTTTGA-------------TAGGATGTCTG--------  346

seq1  CTGAACTCTCCCGTTTAGCGTGACAATCC-TGAGTCGTGTTTCTTGATCA  3738
       ||||        |||| | |  | |||| | ||| ||||| |   ||| 
seq2  -TGAA--------TTTATCATATCCATCCTTTAGT-GTGTTGCAGCATCT  386

seq1  TTCTCTTTATGTTTATTCTGCCTCTGGCTTA--TTGATTATATAGAAATT  3786
      ||||    ||  ||||  ||     || |||   |||   ||| ||| ||
seq2  TTCTAGACATAATTAT--TGGGGGGGGGTTACCATGAAGGTATTGAATTT  434

seq1  AA--------AATTTTTTACTAAATTGAGCAACCACTTTGCCAT-CTTCT  3827
       |        |||| || | |  ||||||  |  | | ||  ||  || |
seq2  TACCAGACTTAATTCTTGA-TCTATTGAG--ATGATTATGTAATATTTAT  481

seq1  TCTTGGTTGTTCTTCTCTGTTTTCAGTTATTTTGGTTATAAAAGCAT---  3874
      |||||  | |  || | || | | |||||||   | ||| | | |||   
seq2  TCTTGAGTATATTTATATGCTGTTAGTTATTAGTGATATTAGACCATTCT  531

seq1  -ACATATGCTAGACTGCAGCACTCACCCTCAGCCCTCAAAGCCAGTTTGC  3923
       ||| ||  | || || |  | ||||    ||   |||      || |||
seq2  CACACAT--TGGAATGAA--ATTCAC---TAG--ATCA----TGGTATGC  568

seq1  CAGGTC-CTTGGAACAGCTTGGGTCCAGGAATGCTGACAAGGGGAGACGA  3972
       |  || |||   |   |||   | ||     |||||  |          
seq2  AATCTCTCTTAAGATTTCTT---TTCA-----GCTGAATA----------  600

seq1  GAGAATGAAGA--AATGATAACTACTAAAGAA-ACAACAGCCACATGGAC  4019
         |||  |||  || || || |   ||||||  ||| ||          
seq2  ---AATATAGATTAAGGAAAAGTGAGAAAGAATTCAAGAG----------  637

seq1  ACAGACTTCCTGGACAGAGGACATCAGCATGTTGATGACACACAGCTGAC  4069
                                                        
seq2  --------------------------------------------------  637

seq1  CAGGGAGAGGGGCTGTTGCATACAGCTGAACAGACAGGGCTATTACAGAT  4119
                                                        
seq2  --------------------------------------------------  637

seq1  AAACAAAAAGGCAGGTCTAGCTAGTCTATGAAAGGTCAGCATTGGAACTG  4169
                                                        
seq2  --------------------------------------------------  637

seq1  GGACCTGAGGAATGTTTTGCCAACCCTCTGAGCCTCACCTAGGGAAAGCT  4219
                                                        
seq2  --------------------------------------------------  637

seq1  TTGCCACTCGCATGGCACTGAGGCTTTTTGGTCCTTCACATGGCCAAAAT  4269
                                                        
seq2  --------------------------------------------------  637

seq1  CAGATCAAAGGTTACATCCTGTTCACTTTCTTCCTCAGTCTTCCCCTGTT  4319
                                                        
seq2  --------------------------------------------------  637

seq1  CTGCTCTTTAGGGGATTGCTCATATTGACATCAGTTCCAGCAAGCATCTT  4369
                                                        
seq2  --------------------------------------------------  637

seq1  CCCAGGTGGGCACTGCATGCCCCCAGTTACAGCACTGGGGTATCCGAGGA  4419
                                                        
seq2  --------------------------------------------------  637

seq1  AGAAGGACCTTGAGTTGTAGGTCACCCTGGGCTACGTAGGAGACACATGT  4469
                                                        
seq2  --------------------------------------------------  637

seq1  GTCCAAAGAAGTAAAAAGAAAAACAAAAGAAACACCTAAACCCAATGTGC  4519
                                                        
seq2  --------------------------------------------------  637

seq1  TGCCTCATGCTTGTAATCTCAGCGTGTGGGGCGTTTGGGCAGGCAGATCA  4569
                                                        
seq2  --------------------------------------------------  637

seq1  CCATAAACTCAAGGACTGCCTAGGTAAGAGTGAGACCAGCCTCCAAGTAC  4619
                                                        
seq2  --------------------------------------------------  637

seq1  ACCCTAATGCCAGACAGCGGTGCCACACACCTTTAATCTCAGCACTGAGA  4669
                                                        
seq2  --------------------------------------------------  637

seq1  GGCAGAGGCAGGCGATCTCTGCAGGGTCTAAAGAAAGATTTCCAGGCTAC  4719
                                                        
seq2  --------------------------------------------------  637

seq1  ATAGAGAAACCAGGGCTTGAAAAACATACCCAGTGTCACATGCCTGTCCT  4769
                                                        
seq2  --------------------------------------------------  637

seq1  AGCAGCTACATGGGAGGGAGGTGGACCTGAGATAATCACTTGAACCTGCC  4819
                                                        
seq2  --------------------------------------------------  637

seq1  AGGAGACTAGCAGCACAGCAGGTTCTCTTCACACGTGAGAAACAGAGGAC  4869
                                                        
seq2  --------------------------------------------------  637

seq1  CTCCATAGTGGGCAGGGAGGATAGGTCAGTGGGTAGCGCCCTTGGCCTGA  4919
                                                        
seq2  --------------------------------------------------  637

seq1  CTGCGTGAGGATCTGAGTTGGAACCCTCAGAACCCGGTTCTGTTCCAGTA  4969
                                                        
seq2  --------------------------------------------------  637

seq1  GCATGCATAGGTACTGTCAGTGCCCCTACAGTGAGAGGTGTACTAGGGAG  5019
                                                        
seq2  --------------------------------------------------  637

seq1  AAAAGAATCCCCAGAGGCTGGCTGACTGCCTAGCTATCTGCGGTAGCAAA  5069
                                                        
seq2  --------------------------------------------------  637

seq1  ACAAGAACCGGTTTCAAACAAGGTAGACCGTGAGGGCTGCACCCGAGTGG  5119
                                                        
seq2  --------------------------------------------------  637

seq1  CACATGTGCATTCGTGTTTGCACATTCTCTTAAGTTTCTGTTGTGAAGAG  5169
                                                        
seq2  --------------------------------------------------  637

seq1  ATACCAGGCCCAAAGCAATTTATTAAAAAAAGTTGAATTGGAGCTTGCTT  5219
                                                        
seq2  --------------------------------------------------  637

seq1  ACGGTTTCAGAACGGTGCGGATCGATTGTGGACAGGAGTGTGGTGCCAGG  5269
                                                        
seq2  --------------------------------------------------  637

seq1  CATGCATGACCATGGGGGCAGTAGCTGGGAGTTTACAGAGAGCTTACTGG  5319
                                                        
seq2  --------------------------------------------------  637

seq1  GAATGGTGGCTACCCACCACAGGTGACACACTTCCTCCAACAAGGCCACA  5369
                                                        
seq2  --------------------------------------------------  637

seq1  CTTCTGAATCTTTTCCACACAGTTCACTAGGAACCAAGAATTGAAACATG  5419
                                                        
seq2  --------------------------------------------------  637

seq1  AGCCTCTGGGGCCCATTCTGATTCAAGCTGCCACACACAAAAGCCCAAAC  5469
                                                        
seq2  --------------------------------------------------  637

seq1  CAAAATTTAAATACACTCAGCTTAGTAGAGGGAAGTAAATATATTTGCAG  5519
                                                        
seq2  --------------------------------------------------  637

seq1  TTAGTCAATCTGTGCACATGCACATAGAAAGATAATTAGGGTCTCAAAAT  5569
                                                        
seq2  --------------------------------------------------  637

seq1  ACATGGTGGTTTGCCAGAGCCGTGCCTGCCTTTAATTGCAGTACTCAGAG  5619
                                                        
seq2  --------------------------------------------------  637

seq1  GCAGAGGATTGTAGATTTCTGTGAGTTCAAGGTCAACTTGGTCTACATAA  5669
                                                        
seq2  --------------------------------------------------  637

seq1  TGAGTTCTAAGACAGTCATGGCTCCAAATTGAGACCTGTCTGAAAAACAG  5719
                                                        
seq2  --------------------------------------------------  637

seq1  AAAAAAATTACAGTGTGGTCACTATTATCTGAAGAGGCGAAGGAAGGCTT  5769
                                                        
seq2  --------------------------------------------------  637

seq1  ACAGAGAACAAATAAATAGTATTGTTTTATTGACTTGCTTAATTATCATT  5819
                                                        
seq2  --------------------------------------------------  637

seq1  GCAGGATGAATGTAGATTTATTTTTAAATTTTTTACATTTATTTATTGTG  5869
                                                        
seq2  --------------------------------------------------  637

seq1  TATATGTTACACAGAAGACAACTTGTGGGAGTTGGCTCTTACCTTTCACC  5919
                                                        
seq2  --------------------------------------------------  637

seq1  ATGTGTATTGTGTTTTATAAAAAGAAAGGGAGCCAGGGATTTGTTTGGCA  5969
                                                        
seq2  --------------------------------------------------  637

seq1  AAGGCACAGTATGGTTTTCGGGGGCGGGGGGGGGGGGGCGCAGAGGCCGG  6019
                                                        
seq2  --------------------------------------------------  637

seq1  CCATGAACATCTGCAGAGACAGGAGAGAGAAGGGGGCAAGCAGCCCCTTT  6069
                                                        
seq2  --------------------------------------------------  637

seq1  TATAGTTAGTCATGCAGATCTGACTGTTGCCAGGTAACTGTGGGGGTGGA  6119
                                                        
seq2  --------------------------------------------------  637

seq1  GCCTAGAAGAAATGCTAACAGTGTGTTTCTGGGAATTAAACTCAGGTTTT  6169
                                                        
seq2  --------------------------------------------------  637

seq1  CAGTAGTGGTGGAAAGTGCCACCCATAGGCCCTGATTTATTAAGGAAAAG  6219
                                                        
seq2  --------------------------------------------------  637

seq1  TGAGAAAAATTCCCAAGAG  6238
                         
seq2  -------------------  637

seq1: chr13_100685551_100686582
seq2: B6Ng01-014F18.g_70_1101

seq1  GAATTCTAAGTTGTTCTCCAGGGTTTGGCAGGTTGCATTTCTCAGTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTTGTTCTCCAGGGTTTGGCAGGTTGCATTTCTCAGTGTGA  50

seq1  ACATCAACTTTCTGAGCATTCAACAGGTCTGGCTGTTTTAAGTGAAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAACTTTCTGAGCATTCAACAGGTCTGGCTGTTTTAAGTGAAAGGT  100

seq1  TTTCAGTTTTGGACTATGATCTGCCTGGTTGCCCATCAGAGATCAAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTTGGACTATGATCTGCCTGGTTGCCCATCAGAGATCAAGCTC  150

seq1  CTGGATAGGCAGGAGAGCCCTTTCAAGGGCTACAGTTGGAGGAAGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATAGGCAGGAGAGCCCTTTCAAGGGCTACAGTTGGAGGAAGAAAAA  200

seq1  AGATCACAGCCTGTGTGACATATACCCCGCCATGCCTGACTGAGGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACAGCCTGTGTGACATATACCCCGCCATGCCTGACTGAGGAGAGA  250

seq1  CGCCTGAGGAAACACAGCTGTGGACACCCACAGAGCTTTATGCTCAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGAGGAAACACAGCTGTGGACACCCACAGAGCTTTATGCTCAAATA  300

seq1  CAAATATCATTTTCTGCCATCTGCACCCTTGGCCATGGTGGCCCTGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATCATTTTCTGCCATCTGCACCCTTGGCCATGGTGGCCCTGGTTG  350

seq1  AAGGCATTGCTGGTAGACATGGCCTTTACCCGGTGCCCCGTCATGTGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTGCTGGTAGACATGGCCTTTACCCGGTGCCCCGTCATGTGGGA  400

seq1  TAGACTGGTAAGTCTAGCTTTGCCCACGGCAGCCATCAGAGACCCACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTGGTAAGTCTAGCTTTGCCCACGGCAGCCATCAGAGACCCACAAT  450

seq1  CTCTCCCAGCATGTGCTGATAAAATTTCTTAGCTGAGAATGAAAACAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCAGCATGTGCTGATAAAATTTCTTAGCTGAGAATGAAAACAACA  500

seq1  AGTAAACAAGGCTTCAAACGAAGCTGTCAAGTCGCTTCATTTCCTATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAAGGCTTCAAACGAAGCTGTCAAGTCGCTTCATTTCCTATTAT  550

seq1  GTGTTTTTATTTCTGAAGGAAGAATATGCACAGGACAGTACAGAGCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTATTTCTGAAGGAAGAATATGCACAGGACAGTACAGAGCTTCT  600

seq1  AAACACCATTACTTGTTTCCTAAAAATTTTTCCAGTTTCTCACAGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCATTACTTGTTTCCTAAAAATTTTTCCAGTTTCTCACAGAAGAA  650

seq1  TTCTGACACTCTCAACGCATTTCAGAGGAAATCTGTTTTGTCCTCATCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACACTCTCAACGCATTTCAGAGGAAATCTGTTTTGTCCTCATCTA  700

seq1  CTCTCTCCCCACCTAGAACTCTGTAAACATACTTCTTAGCTCTGCAGGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCCCACCTAGAACTCTGTAAACATACTTCTTAGCTCTGCAGGCC  750

seq1  CAGATAGGAAAAGGGAGAAAGATTCATCGACATGTGAACATCAAGAGTGG  800
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  CAGATAGG-AAAGGGAGAAAGA-TCATCGACATGTGAACATCAAGAGTGG  798

seq1  GCTGGGAGGAAAACAGACAGTAGTGGCTCCTTGCAAAACCTCTGCAGCCC  850
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GCTGGGAGGAAAACAGACAGTAGTGGCT-CTTGCAAAACTTCTGCAGCCC  847

seq1  GCTGTCTGGTACCAAGGTCCGAAGCCAGGAGCAC-TATTTAGGGGGAACC  899
      ||||||||||||||| |||||||||||||||||| ||||||||||| || 
seq2  GCTGTCTGGTACCAAAGTCCGAAGCCAGGAGCACATATTTAGGGGG-ACT  896

seq1  CTAAAGTGG-AAGATCCTAATTTGGC-TGCAGAG-TAAAGCTGCCTGGAA  946
      ||||||||| |||||||||||||||| ||||||| ||||||||| || | 
seq2  CTAAAGTGGAAAGATCCTAATTTGGCGTGCAGAGATAAAGCTGCTTGAAT  946

seq1  CCTTTTTTAAAAAATAGCAA--TTTGGGCCTCATCCTTACAAATCCTGAC  994
      ||||||||||||||||||||  || |||||||||||| || |||||||| 
seq2  CCTTTTTTAAAAAATAGCAAATTTGGGGCCTCATCCTAAC-AATCCTGA-  994

seq1  CTACTTGGCGCAGGGTGGTAGCCAGGGAAGGGGTGGGG  1032
      ||||| |||||| |||||||||||||||| ||||||||
seq2  CTACTGGGCGCAAGGTGGTAGCCAGGGAAAGGGTGGGG  1032