BAC Information

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BAC

Clone NameB6Ng01-015J06
Chromosome13 (Build37)
Map Location 82,684,487 - 82,685,492
singlet/doubletsinglet
Overlap genenone
Upstream geneGpr98, Lysmd3, Polr3g, 2900024O10Rik, Cetn3, LOC238756
Downstream geneLOC667018, Mef2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015J06.bB6Ng01-015J06.g
ACCDH849794DH849795
length1,1781,004
definitionDH849794|Mus musculus domesticus DNA, BAC clone: B6Ng01-015J06, 5' end.DH849795|Mus musculus domesticus DNA, BAC clone: B6Ng01-015J06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctcaatcaagtagaacccaaaagaatgatacaaag
aatcaaccaaaccagcagctgcttctttgagaaaatcaactagttagata
aactcttatccagattaaccagagggcagaaagacagtatccaaatcaac
aaaataagaaatgaaaagggagacataacaaaagaaactgagaaaatttt
aaaaatcagatcctattacaaaaagctatgctcaacaaaactggatgatc
tggaggaaatggacaattttctggacacataccagaaaccaaaattaatt
caggatcagataaacaatctaaacagtcccataacccctaaaataataga
agcagttgttaatagtctcccacccccccaaaaaaaaagccctgggtaag
aaggatttagtgcataattctataagaccttcaaagaagacctaatgctg
atactcctcaaactattccacaaaatagaaacagaaggaacactaaacat
ttctttctataaggccacaattactctgatacctaaaccacacaaaaccc
tacaaagaaagagaacttcagaccaatttcctttatggctatcaatgcaa
aaattctcaataaaattctcacaaactgaatccaagaacacatcagaatg
atcatccaaaagaatcaagtaggttttatcccagggatgtaaggatgatt
caatatatggaaatccatcaacataatccagtatatacagaaacacaaaa
aaattaaaaacacatgatcattttattagatgcttagaaagcatttgaca
aaatccaacaccccttcatgataaagtattggaaagatcaggaattcaag
acccatacctaaacatagtaaagcaatatatagcaaaccagtaaccaaca
taaagttaaagggagagaaagtgaagcaatcctactaaaatcagggacta
gacagctccccactctctcctactattcatatagtactgagtctagctga
gcataaacataaaggatgtcacaggatacaatggaagagagtcgatatca
tattgcgatgaatggatgtaatactaaatgaccgaactcacagaaactct
actgataacacttcgcaggcctgaataaatatcacatctgcatactcaga
tactgctgatagaataggaaacaactga
gaattcaaccccaaatccactgggaatcttttcatctaagttaatgtgaa
gagaagcagctacaattttacttaggaaggcaattagtcaggtgtgtcat
gcctgttctagaatagttgaaaattgtatctaaattcttttaattgtgag
aacaaacactgtttatcgaggtcagagaagagagagagagttaattttct
gaagggagttgtgcattttcccaccccaaactcttaatagcatcaaataa
aaggagaacagcacataagataacagcaaatagaggaatggaaataagaa
gatgaatttgtctaatagaaaataattctggaatgacaagaaaaagtgtg
tatggagactgtgaaaagcattgataaaacctgatgcattttctcttcag
ccctgggatgcatagaaatgaaaacattcagtgagtccccagtttgacta
aagaagaagctaaagtgcagaactgtgagctgagtttatttcacagcaag
ccaccagcacaactgcatggaaaacatttatgtttgaatctgagattagg
tttcattcactctcaaaaaagcaaataataaaaggttttcctaggagaca
aaagaagtctttggccagtatctgattttgttagtcagttgaaactgata
tctgagagctagtcaacataccctacttcctggagctgactgtgtgctca
tctgtggcaaaccctgcctgcaaaattcatgccaacatggactaagaaat
ccaccttcaaatagcaatctggctccctgaattatcattatttcttttta
atttaaaatttttattgttttaaactagttttaataattctttgtaaatt
ccacagaacacattttgaatataaagtagcataattgggtactatgtgtg
ggatatttccacccacactcacccctgttcctcctccaaactttatagtc
tcctctgctcttactcctcacatcacatgccatactacacaaatacccac
aaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_82684487_82685492
seq2: B6Ng01-015J06.g_67_1070 (reverse)

seq1  GTTTGTGTGTATTTGTGTATGTATGTGCATGTGAATGTGA-GAGTAAGAG  49
      ||||||| ||||||||||| ||||| ||||||| |||||| |||||||||
seq2  GTTTGTGGGTATTTGTGTA-GTATG-GCATGTG-ATGTGAGGAGTAAGAG  47

seq1  CAGAGGAGACTATAAAGTTTGGAGGAGGAACAGGGGTGAGTGTGGGTGGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGACTATAAAGTTTGGAGGAGGAACAGGGGTGAGTGTGGGTGGA  97

seq1  AATATCCCACACATAGTACCCAATTATGCTACTTTATATTCAAAATGTGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCCACACATAGTACCCAATTATGCTACTTTATATTCAAAATGTGT  147

seq1  TCTGTGGAATTTACAAAGAATTATTAAAACTAGTTTAAAACAATAAAAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGAATTTACAAAGAATTATTAAAACTAGTTTAAAACAATAAAAAT  197

seq1  TTTAAATTAAAAAGAAATAATGATAATTCAGGGAGCCAGATTGCTATTTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTAAAAAGAAATAATGATAATTCAGGGAGCCAGATTGCTATTTG  247

seq1  AAGGTGGATTTCTTAGTCCATGTTGGCATGAATTTTGCAGGCAGGGTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGATTTCTTAGTCCATGTTGGCATGAATTTTGCAGGCAGGGTTTG  297

seq1  CCACAGATGAGCACACAGTCAGCTCCAGGAAGTAGGGTATGTTGACTAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATGAGCACACAGTCAGCTCCAGGAAGTAGGGTATGTTGACTAGC  347

seq1  TCTCAGATATCAGTTTCAACTGACTAACAAAATCAGATACTGGCCAAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGATATCAGTTTCAACTGACTAACAAAATCAGATACTGGCCAAAGA  397

seq1  CTTCTTTTGTCTCCTAGGAAAACCTTTTATTATTTGCTTTTTTGAGAGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTGTCTCCTAGGAAAACCTTTTATTATTTGCTTTTTTGAGAGTG  447

seq1  AATGAAACCTAATCTCAGATTCAAACATAAATGTTTTCCATGCAGTTGTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAACCTAATCTCAGATTCAAACATAAATGTTTTCCATGCAGTTGTG  497

seq1  CTGGTGGCTTGCTGTGAAATAAACTCAGCTCACAGTTCTGCACTTTAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGCTTGCTGTGAAATAAACTCAGCTCACAGTTCTGCACTTTAGCT  547

seq1  TCTTCTTTAGTCAAACTGGGGACTCACTGAATGTTTTCATTTCTATGCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTAGTCAAACTGGGGACTCACTGAATGTTTTCATTTCTATGCAT  597

seq1  CCCAGGGCTGAAGAGAAAATGCATCAGGTTTTATCAATGCTTTTCACAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGCTGAAGAGAAAATGCATCAGGTTTTATCAATGCTTTTCACAGT  647

seq1  CTCCATACACACTTTTTCTTGTCATTCCAGAATTATTTTCTATTAGACAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATACACACTTTTTCTTGTCATTCCAGAATTATTTTCTATTAGACAA  697

seq1  ATTCATCTTCTTATTTCCATTCCTCTATTTGCTGTTATCTTATGTGCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTTCTTATTTCCATTCCTCTATTTGCTGTTATCTTATGTGCTGT  747

seq1  TCTCCTTTTATTTGATGCTATTAAGAGTTTGGGGTGGGAAAATGCACAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTTATTTGATGCTATTAAGAGTTTGGGGTGGGAAAATGCACAAC  797

seq1  TCCCTTCAGAAAATTAACTCTCTCTCTCTTCTCTGACCTCGATAAACAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCAGAAAATTAACTCTCTCTCTCTTCTCTGACCTCGATAAACAGT  847

seq1  GTTTGTTCTCACAATTAAAAGAATTTAGATACAATTTTCAACTATTCTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTCTCACAATTAAAAGAATTTAGATACAATTTTCAACTATTCTAG  897

seq1  AACAGGCATGACACACCTGACTAATTGCCTTCCTAAGTAAAATTGTAGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCATGACACACCTGACTAATTGCCTTCCTAAGTAAAATTGTAGCT  947

seq1  GCTTCTCTTCACATTAACTTAGATGAAAAGATTCCCAGTGGATTTGGGGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTTCACATTAACTTAGATGAAAAGATTCCCAGTGGATTTGGGGT  997

seq1  TGAATTC  1006
      |||||||
seq2  TGAATTC  1004