BAC Information

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BAC

Clone NameB6Ng01-015N07
Chromosome13 (Build37)
Map Location 6,756,148 - 6,756,930
singlet/doubletsinglet
Overlap genenone
Upstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015N07.bB6Ng01-015N07.g
ACCDH849985DH849986
length568780
definitionDH849985|Mus musculus domesticus DNA, BAC clone: B6Ng01-015N07, 5' end.DH849986|Mus musculus domesticus DNA, BAC clone: B6Ng01-015N07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aattcaagtgttttccagagttgagaagcacccagcagatactagctctg
attatgatcagttatgtttatcaacaaaagcatcacatcatgggttaaga
ggacattaagctaattactcttaagcaatttgactaaagtcattgtcctg
aagcctgttcccactcaggtgtgcagttataccacttgatcactttcttc
ttttatcaaaaatagattcttttcctctcattgcatatcatgattacagt
tgtccttctcttcacacagccaaattcttcagcatctcctctccattggg
atctacccccttctgtctctcattagagaacaaacgggcttctaagggct
aataataaaacacaaacaagcacatcagagtagagcaaagcaaacaaaca
gaaagaaaaaagcccgggaaaaggacaagaagcaggtatagatacagaga
cctgcttgtttgcacatgcagtaatctcaatgaaacataacacttgaagt
catagtgtgtgtgcaaaggacctgtaaggttagagagaggaggaaaggga
ggagaaggagagaggggg

gaattccagataaaattgtaaaaaggaagcaaataaatgaaacaaacccc
acacagacctcttaactaaatcaaccaactaaacaaacaactggtcaaat
aaaaaaaaacaattttcacgctgaaagttctcaacagagctatagaaata
tctcagtgattgcagagcaagtgtatgtgtgtgtgtttatttgtgaagat
acaatttgttcacaatttgtccacatatccaagagcactagactttaaaa
cacactgaaataaactaaagtatcccacattttgtgaggatgtgatatag
cctggataattagtccactgtttttaatagttctttttacaattgtaatt
aaaattagaatttcttgaattctggagttgtagtagcactggatttattt
tcagagaataaacctgtatttagcatttctgacactagagggaagcacta
aacagatgaaatgagtgagacagagagacagagacacagacaggagacag
actcagagagaggcagagacagacaaatgcactaagatacacagtaggga
aatatttaactagatctcagtgataatgttcttactacctggctgttgtc
ctctgtactcttcccgttagtcctctttttcattttgaacatgaaaaatt
tagaaattcacacgaagggatggttgtcctggtagtggtctgaagtccca
gatactcaagaggttgagtgtatatgtatatatatgaatatatatatata
tatatatatatctatatattatatatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6756148_6756930
seq2: B6Ng01-015N07.g_68_847

seq1  GAATTCCAGATAAAATTGTAAAAAGGAAGCAAATAAATGAAACAAACCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATAAAATTGTAAAAAGGAAGCAAATAAATGAAACAAACCCC  50

seq1  ACACAGACCTCTTAACTAAATCAACCAACTAAACAAACAACTGGTCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACCTCTTAACTAAATCAACCAACTAAACAAACAACTGGTCAAAT  100

seq1  AAAAAAAAACAATTTTCACGCTGAAAGTTCTCAACAGAGCTATAGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAACAATTTTCACGCTGAAAGTTCTCAACAGAGCTATAGAAATA  150

seq1  TCTCAGTGATTGCAGAGCAAGTGTATGTGTGTGTGTTTATTTGTGAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGATTGCAGAGCAAGTGTATGTGTGTGTGTTTATTTGTGAAGAT  200

seq1  ACAATTTGTTCACAATTTGTCCACATATCCAAGAGCACTAGACTTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTGTTCACAATTTGTCCACATATCCAAGAGCACTAGACTTTAAAA  250

seq1  CACACTGAAATAAACTAAAGTATCCCACATTTTGTGAGGATGTGATATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGAAATAAACTAAAGTATCCCACATTTTGTGAGGATGTGATATAG  300

seq1  CCTGGATAATTAGTCCACTGTTTTTAATAGTTCTTTTTACAATTGTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATAATTAGTCCACTGTTTTTAATAGTTCTTTTTACAATTGTAATT  350

seq1  AAAATTAGAATTTCTTGAATTCTGGAGTTGTAGTAGCACTGGATTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGAATTTCTTGAATTCTGGAGTTGTAGTAGCACTGGATTTATTT  400

seq1  TCAGAGAATAAACCTGTATTTAGCATTTCTGACACTAGAGGGAAGCACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAATAAACCTGTATTTAGCATTTCTGACACTAGAGGGAAGCACTA  450

seq1  AACAGATGAAATGAGTGAGACAGAGAGACAGAGACACAGACAGGAGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGAAATGAGTGAGACAGAGAGACAGAGACACAGACAGGAGACAG  500

seq1  ACTCAGAGAGAGGCAGAGACAGACAAATGCACTAAGATACACAGTAGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGAGAGGCAGAGACAGACAAATGCACTAAGATACACAGTAGGGA  550

seq1  AATATTTAACTAGATCTCAGTGATAATGTTCTTACTACCTGGCTGTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAACTAGATCTCAGTGATAATGTTCTTACTACCTGGCTGTTGTC  600

seq1  CTCTGTACTCTTCCCGTTAGTCCTCTTTTTCATTTTGAACATGAAAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTACTCTTCCCGTTAGTCCTCTTTTTCATTTTGAACATGAAAAATT  650

seq1  TAGAAATTCACACGAAGGGATGGTTGTCCTGGTAGTGGTCTGAAGTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTCACACGAAGGGATGGTTGTCCTGGTAGTGGTCTGAAGTCCCA  700

seq1  GATACTCAAGAGGTTGAGTGTATATGTATATATATGAATATATATATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCAAGAGGTTGAGTGTATATGTATATATATGAATATATATATATA  750

seq1  TATATATATATATATACATACATATATATATTT  783
      ||||||||||| |||| ||   |||||||||||
seq2  TATATATATATCTATATAT---TATATATATTT  780


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